RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 ANGEL1Q9UNK9 670 aaKnown RBP9.89□□□□□ -0.83
SF3A1-208ENST00000485618 SCAF8Q9UPN6 1271 aaKnown RBP9.89□□□□□ -0.83
SF3A1-208ENST00000485618 FLT1P17948 1338 aa9.88□□□□□ -0.83
SF3A1-208ENST00000485618 PDE4DIPQ5VU43 2346 aa9.88□□□□□ -0.83
SF3A1-208ENST00000485618 GPAA1O43292 621 aa9.88□□□□□ -0.83
SF3A1-208ENST00000485618 TDO2P48775 406 aa9.88□□□□□ -0.83
SF3A1-208ENST00000485618 MAP3K9P80192 1104 aa9.88□□□□□ -0.83
SF3A1-208ENST00000485618 PRAMEF18Q5VWM3 479 aa9.88□□□□□ -0.83
SF3A1-208ENST00000485618 CWC27Q6UX04 472 aaKnown RBP9.88□□□□□ -0.83
SF3A1-208ENST00000485618 MOB2Q70IA6 237 aa9.88□□□□□ -0.83
SF3A1-208ENST00000485618 ANKRD13AQ8IZ07 590 aa9.88□□□□□ -0.83
SF3A1-208ENST00000485618 LCORLQ8N3X6 602 aa9.88□□□□□ -0.83
SF3A1-208ENST00000485618 SLC10A4Q96EP9 437 aa9.88□□□□□ -0.83
SF3A1-208ENST00000485618 TEPSINQ96N21 525 aa9.88□□□□□ -0.83
SF3A1-208ENST00000485618 PUS7LQ9H0K6 701 aaKnown RBP9.88□□□□□ -0.83
SF3A1-208ENST00000485618 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.88□□□□□ -0.83
SF3A1-208ENST00000485618 GINM1Q9NU53 330 aa9.88□□□□□ -0.83
SF3A1-208ENST00000485618 ARPP21Q9UBL0 812 aaPredicted RBP9.88□□□□□ -0.83
SF3A1-208ENST00000485618 CTNNA3Q9UI47 895 aa9.88□□□□□ -0.83
SF3A1-208ENST00000485618 ZNF646O15015 1829 aaPredicted RBP9.88□□□□□ -0.83
SF3A1-208ENST00000485618 AK9Q5TCS8 1911 aa9.88□□□□□ -0.83
SF3A1-208ENST00000485618 ECM29Q5VYK3 1845 aa9.87□□□□□ -0.83
SF3A1-208ENST00000485618 COL2A1P02458 1487 aaPredicted RBP9.87□□□□□ -0.83
SF3A1-208ENST00000485618 UBE2Q2LH0YL09 131 aa9.87□□□□□ -0.83
SF3A1-208ENST00000485618 MKRN3Q13064 507 aaKnown RBP9.87□□□□□ -0.83
SF3A1-208ENST00000485618 MAP3K11Q16584 847 aa9.87□□□□□ -0.83
SF3A1-208ENST00000485618 OSBP2Q969R2 916 aa9.87□□□□□ -0.83
SF3A1-208ENST00000485618 NAPBQ9H115 298 aa9.87□□□□□ -0.83
SF3A1-208ENST00000485618 PICK1Q9NRD5 415 aa9.87□□□□□ -0.83
SF3A1-208ENST00000485618 SWAP70Q9UH65 585 aa9.87□□□□□ -0.83
SF3A1-208ENST00000485618 SERPINB13Q9UIV8 391 aa9.87□□□□□ -0.83
SF3A1-208ENST00000485618 HPS5Q9UPZ3 1129 aa9.87□□□□□ -0.83
SF3A1-208ENST00000485618 MAST2Q6P0Q8 1798 aa9.87□□□□□ -0.83
SF3A1-208ENST00000485618 ATRNL1Q5VV63 1379 aa9.87□□□□□ -0.83
SF3A1-208ENST00000485618 RAD50Q92878 1312 aa9.86□□□□□ -0.83
SF3A1-208ENST00000485618 CTNND1O60716 968 aaKnown RBP9.86□□□□□ -0.83
SF3A1-208ENST00000485618 TBC1D8O95759 1140 aa9.86□□□□□ -0.83
SF3A1-208ENST00000485618 NT5C2P49902 561 aa9.86□□□□□ -0.83
SF3A1-208ENST00000485618 PRKG1Q13976 671 aa9.86□□□□□ -0.83
SF3A1-208ENST00000485618 MIGA2Q7L4E1 593 aa9.86□□□□□ -0.83
SF3A1-208ENST00000485618 ZNF296Q8WUU4 475 aaPredicted RBP9.86□□□□□ -0.83
SF3A1-208ENST00000485618 WRNIP1Q96S55 665 aa9.86□□□□□ -0.83
SF3A1-208ENST00000485618 TBC1D2Q9BYX2 928 aa9.86□□□□□ -0.83
SF3A1-208ENST00000485618 EHD4Q9H223 541 aa9.86□□□□□ -0.83
SF3A1-208ENST00000485618 DCP1AQ9NPI6 582 aaPredicted RBP9.86□□□□□ -0.83
SF3A1-208ENST00000485618 DDX4Q9NQI0 724 aaKnown RBP9.86□□□□□ -0.83
SF3A1-208ENST00000485618 SAP30BPQ9UHR5 308 aaKnown RBP9.86□□□□□ -0.83
SF3A1-208ENST00000485618 PALD1Q9ULE6 856 aa9.86□□□□□ -0.83
SF3A1-208ENST00000485618 DOCK2Q92608 1830 aa9.86□□□□□ -0.83
SF3A1-208ENST00000485618 CCDC171Q6TFL3 1326 aa9.85□□□□□ -0.83
SF3A1-208ENST00000485618 DDTLA6NHG4 134 aaPredicted RBP9.85□□□□□ -0.83
SF3A1-208ENST00000485618 MINDY4BA8MYZ0 360 aa9.85□□□□□ -0.83
SF3A1-208ENST00000485618 USP17L12C9JPN9 530 aa9.85□□□□□ -0.83
SF3A1-208ENST00000485618 USP17L21D6R901 530 aa9.85□□□□□ -0.83
SF3A1-208ENST00000485618 CDC45O75419 566 aa9.85□□□□□ -0.83
SF3A1-208ENST00000485618 USP2O75604 605 aaPredicted RBP9.85□□□□□ -0.83
SF3A1-208ENST00000485618 GSPT1P15170 499 aaKnown RBP9.85□□□□□ -0.83
SF3A1-208ENST00000485618 CHMLP26374 656 aa9.85□□□□□ -0.83
SF3A1-208ENST00000485618 INHBEP58166 350 aa9.85□□□□□ -0.83
SF3A1-208ENST00000485618 MAP3K10Q02779 954 aa9.85□□□□□ -0.83
SF3A1-208ENST00000485618 PDE4BQ07343 736 aa9.85□□□□□ -0.83
SF3A1-208ENST00000485618 NMIQ13287 307 aaPredicted RBP9.85□□□□□ -0.83
SF3A1-208ENST00000485618 ALX1Q15699 326 aa9.85□□□□□ -0.83
SF3A1-208ENST00000485618 SBK1Q52WX2 424 aa9.85□□□□□ -0.83
SF3A1-208ENST00000485618 PPP4R3BQ5MIZ7 849 aa9.85□□□□□ -0.83
SF3A1-208ENST00000485618 LDLRAD1Q5T700 205 aa9.85□□□□□ -0.83
SF3A1-208ENST00000485618 ZFPM1Q8IX07 1006 aa9.85□□□□□ -0.83
SF3A1-208ENST00000485618 SDR42E1Q8WUS8 393 aa9.85□□□□□ -0.83
SF3A1-208ENST00000485618 FAM227BQ96M60 508 aa9.85□□□□□ -0.83
SF3A1-208ENST00000485618 MKNK2Q9HBH9 465 aa9.85□□□□□ -0.83
SF3A1-208ENST00000485618 CABP5Q9NP86 173 aa9.85□□□□□ -0.83
SF3A1-208ENST00000485618 MYH7P12883 1935 aa9.85□□□□□ -0.83
SF3A1-208ENST00000485618 GSG1L2A8MUP6 293 aa9.84□□□□□ -0.83
SF3A1-208ENST00000485618 M0R2C6 588 aa9.84□□□□□ -0.83
SF3A1-208ENST00000485618 ASNSP08243 561 aa9.84□□□□□ -0.83
SF3A1-208ENST00000485618 PCP11498 1178 aaKnown RBP9.84□□□□□ -0.83
SF3A1-208ENST00000485618 SREBF2Q12772 1141 aa9.84□□□□□ -0.83
SF3A1-208ENST00000485618 PKN2Q16513 984 aaKnown RBP9.84□□□□□ -0.83
SF3A1-208ENST00000485618 CERKLQ49MI3 558 aaPredicted RBP9.84□□□□□ -0.83
SF3A1-208ENST00000485618 C12orf60Q5U649 245 aa9.84□□□□□ -0.83
SF3A1-208ENST00000485618 PRPF38BQ5VTL8 546 aaKnown RBP9.84□□□□□ -0.83
SF3A1-208ENST00000485618 OTUD7BQ6GQQ9 843 aa9.84□□□□□ -0.83
SF3A1-208ENST00000485618 METTL16Q86W50 562 aaKnown RBP9.84□□□□□ -0.83
SF3A1-208ENST00000485618 IFNL3Q8IZI9 196 aa9.84□□□□□ -0.83
SF3A1-208ENST00000485618 ZNF444Q8N0Y2 327 aaPredicted RBP9.84□□□□□ -0.83
SF3A1-208ENST00000485618 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.84□□□□□ -0.83
SF3A1-208ENST00000485618 CCDC17Q96LX7 622 aa9.84□□□□□ -0.83
SF3A1-208ENST00000485618 RNF41Q9H4P4 317 aaPredicted RBP9.84□□□□□ -0.83
SF3A1-208ENST00000485618 ZNF112Q9UJU3 913 aa9.84□□□□□ -0.83
SF3A1-208ENST00000485618 MYO5AQ9Y4I1 1855 aaKnown RBP9.83□□□□□ -0.84
SF3A1-208ENST00000485618 A0A0D9SFI3 127 aa9.83□□□□□ -0.84
SF3A1-208ENST00000485618 GPR25O00155 361 aa9.83□□□□□ -0.84
SF3A1-208ENST00000485618 ZNF213O14771 459 aa9.83□□□□□ -0.84
SF3A1-208ENST00000485618 PRKAB2O43741 272 aa9.83□□□□□ -0.84
SF3A1-208ENST00000485618 ZBTB48P10074 688 aaPredicted RBP9.83□□□□□ -0.84
SF3A1-208ENST00000485618 HSPD1P10809 573 aaKnown RBP9.83□□□□□ -0.84
SF3A1-208ENST00000485618 IMMTQ16891 758 aaKnown RBP9.83□□□□□ -0.84
SF3A1-208ENST00000485618 SLFNL1Q499Z3 407 aa9.83□□□□□ -0.84
SF3A1-208ENST00000485618 CTR9Q6PD62 1173 aa9.83□□□□□ -0.84
SF3A1-208ENST00000485618 SH3BP5LQ7L8J4 393 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms