RNA–Protein interactions for RNA: ENST00000485042.1

XPA-203, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-203ENST00000485042 PDE4BQ07343 736 aa6.29□□□□□ -1.4
XPA-203ENST00000485042 RASGRF1Q13972 1273 aa6.29□□□□□ -1.4
XPA-203ENST00000485042 MTERF2Q49AM1 385 aa6.29□□□□□ -1.4
XPA-203ENST00000485042 LRFN4Q6PJG9 635 aa6.29□□□□□ -1.4
XPA-203ENST00000485042 TTC6Q86TZ1 520 aa6.29□□□□□ -1.4
XPA-203ENST00000485042 C19orf47Q8N9M1 422 aaKnown RBP6.29□□□□□ -1.4
XPA-203ENST00000485042 KLHL23Q8NBE8 558 aa6.29□□□□□ -1.4
XPA-203ENST00000485042 ZNF417Q8TAU3 575 aa6.29□□□□□ -1.4
XPA-203ENST00000485042 MICAL1Q8TDZ2 1067 aa6.29□□□□□ -1.4
XPA-203ENST00000485042 KLHDC7BQ96G42 594 aa6.29□□□□□ -1.4
XPA-203ENST00000485042 ZNF587Q96SQ5 575 aaPredicted RBP6.29□□□□□ -1.4
XPA-203ENST00000485042 TM9SF2Q99805 663 aa6.29□□□□□ -1.4
XPA-203ENST00000485042 CORINQ9Y5Q5 1042 aa6.29□□□□□ -1.4
XPA-203ENST00000485042 A0A1W2PQH9 124 aa6.28□□□□□ -1.4
XPA-203ENST00000485042 DCDC2CA8MYV0 355 aa6.28□□□□□ -1.4
XPA-203ENST00000485042 ZNF862O60290 1169 aa6.28□□□□□ -1.4
XPA-203ENST00000485042 CDC45O75419 566 aa6.28□□□□□ -1.4
XPA-203ENST00000485042 GJB6O95452 261 aa6.28□□□□□ -1.4
XPA-203ENST00000485042 PROCP04070 461 aa6.28□□□□□ -1.4
XPA-203ENST00000485042 SELPP16109 830 aa6.28□□□□□ -1.4
XPA-203ENST00000485042 GUCY2CP25092 1073 aa6.28□□□□□ -1.4
XPA-203ENST00000485042 HP1BP3Q5SSJ5 553 aaPredicted RBP6.28□□□□□ -1.4
XPA-203ENST00000485042 MSL1Q68DK7 614 aa6.28□□□□□ -1.4
XPA-203ENST00000485042 C6orf15Q6UXA7 325 aaPredicted RBP6.28□□□□□ -1.4
XPA-203ENST00000485042 C8orf86Q6ZUL3 223 aa6.28□□□□□ -1.4
XPA-203ENST00000485042 LILRB2Q8N423 598 aa6.28□□□□□ -1.4
XPA-203ENST00000485042 TMEM40Q8WWA1 233 aa6.28□□□□□ -1.4
XPA-203ENST00000485042 NRSN2Q9GZP1 204 aa6.28□□□□□ -1.4
XPA-203ENST00000485042 FANCLQ9NW38 375 aa6.28□□□□□ -1.4
XPA-203ENST00000485042 REV1Q9UBZ9 1251 aa6.28□□□□□ -1.4
XPA-203ENST00000485042 CSADQ9Y600 493 aa6.28□□□□□ -1.4
XPA-203ENST00000485042 PRR36Q9H6K5 1346 aa6.27□□□□□ -1.41
XPA-203ENST00000485042 PRAMEF27A3QJZ7 478 aa6.27□□□□□ -1.41
XPA-203ENST00000485042 MEIS3P2A8K0S8 358 aa6.27□□□□□ -1.41
XPA-203ENST00000485042 B2RBV5 119 aa6.27□□□□□ -1.41
XPA-203ENST00000485042 CTSBP07858 339 aa6.27□□□□□ -1.41
XPA-203ENST00000485042 CELA2BP08218 269 aaPredicted RBP6.27□□□□□ -1.41
XPA-203ENST00000485042 SLFN14P0C7P3 912 aa6.27□□□□□ -1.41
XPA-203ENST00000485042 SRSF11Q05519 484 aaKnown RBP6.27□□□□□ -1.41
XPA-203ENST00000485042 CHSY3Q70JA7 882 aa6.27□□□□□ -1.41
XPA-203ENST00000485042 C12orf40Q86WS4 652 aa6.27□□□□□ -1.41
XPA-203ENST00000485042 FAM178BQ8IXR5 827 aa6.27□□□□□ -1.41
XPA-203ENST00000485042 GALNT6Q8NCL4 622 aa6.27□□□□□ -1.41
XPA-203ENST00000485042 EDARADDQ8WWZ3 215 aa6.27□□□□□ -1.41
XPA-203ENST00000485042 APPBP2Q92624 585 aa6.27□□□□□ -1.41
XPA-203ENST00000485042 WDR89Q96FK6 387 aaPredicted RBP6.27□□□□□ -1.41
XPA-203ENST00000485042 SLKQ9H2G2 1235 aaPredicted RBP6.27□□□□□ -1.41
XPA-203ENST00000485042 PICK1Q9NRD5 415 aa6.27□□□□□ -1.41
XPA-203ENST00000485042 ENAMQ9NRM1 1142 aa6.27□□□□□ -1.41
XPA-203ENST00000485042 GMIPQ9P107 970 aa6.27□□□□□ -1.41
XPA-203ENST00000485042 SLC12A7Q9Y666 1083 aa6.27□□□□□ -1.41
XPA-203ENST00000485042 CUX2O14529 1486 aa6.27□□□□□ -1.41
XPA-203ENST00000485042 ERCC6Q03468 1493 aa6.27□□□□□ -1.41
XPA-203ENST00000485042 ESYT3A0FGR9 886 aa6.26□□□□□ -1.41
XPA-203ENST00000485042 IBSPP21815 317 aaPredicted RBP6.26□□□□□ -1.41
XPA-203ENST00000485042 PTPROQ16827 1216 aa6.26□□□□□ -1.41
XPA-203ENST00000485042 KIF4BQ2VIQ3 1234 aa6.26□□□□□ -1.41
XPA-203ENST00000485042 OVOS1Q6IE37 1185 aa6.26□□□□□ -1.41
XPA-203ENST00000485042 HOMER1Q86YM7 354 aa6.26□□□□□ -1.41
XPA-203ENST00000485042 Q8N3U1 123 aa6.26□□□□□ -1.41
XPA-203ENST00000485042 ACDQ96AP0 544 aa6.26□□□□□ -1.41
XPA-203ENST00000485042 ATG4CQ96DT6 458 aa6.26□□□□□ -1.41
XPA-203ENST00000485042 KANSL2Q9H9L4 492 aa6.26□□□□□ -1.41
XPA-203ENST00000485042 RAD18Q9NS91 495 aa6.26□□□□□ -1.41
XPA-203ENST00000485042 KLHL3Q9UH77 587 aa6.26□□□□□ -1.41
XPA-203ENST00000485042 PFDN2Q9UHV9 154 aa6.26□□□□□ -1.41
XPA-203ENST00000485042 TACC3Q9Y6A5 838 aa6.26□□□□□ -1.41
XPA-203ENST00000485042 CNTNAP5Q8WYK1 1306 aa6.25□□□□□ -1.41
XPA-203ENST00000485042 LOC100289279A0A1B0GTE1 492 aa6.25□□□□□ -1.41
XPA-203ENST00000485042 FAM86C2PA6NEL3 165 aa6.25□□□□□ -1.41
XPA-203ENST00000485042 SLC22A31A6NKX4 558 aa6.25□□□□□ -1.41
XPA-203ENST00000485042 DDX3YO15523 660 aaKnown RBP6.25□□□□□ -1.41
XPA-203ENST00000485042 PGRP06401 933 aa6.25□□□□□ -1.41
XPA-203ENST00000485042 NME1P15531 152 aaKnown RBP6.25□□□□□ -1.41
XPA-203ENST00000485042 AMPD1P23109 780 aa6.25□□□□□ -1.41
XPA-203ENST00000485042 GRK4P32298 578 aa6.25□□□□□ -1.41
XPA-203ENST00000485042 ETF1P62495 437 aaKnown RBP6.25□□□□□ -1.41
XPA-203ENST00000485042 SETDB1Q15047 1291 aa6.25□□□□□ -1.41
XPA-203ENST00000485042 PLEKHG4Q58EX7 1191 aa6.25□□□□□ -1.41
XPA-203ENST00000485042 ARSHQ5FYA8 562 aa6.25□□□□□ -1.41
XPA-203ENST00000485042 C1orf229Q6ZS94 237 aaPredicted RBP6.25□□□□□ -1.41
XPA-203ENST00000485042 CYFIP1Q7L576 1253 aa6.25□□□□□ -1.41
XPA-203ENST00000485042 NLRC3Q7RTR2 1065 aa6.25□□□□□ -1.41
XPA-203ENST00000485042 MAP4K3Q8IVH8 894 aa6.25□□□□□ -1.41
XPA-203ENST00000485042 DMRTC2Q8IXT2 367 aaPredicted RBP6.25□□□□□ -1.41
XPA-203ENST00000485042 TAB3Q8N5C8 712 aaPredicted RBP6.25□□□□□ -1.41
XPA-203ENST00000485042 BTBD6Q96KE9 485 aa6.25□□□□□ -1.41
XPA-203ENST00000485042 KDM2BQ8NHM5 1336 aa6.25□□□□□ -1.41
XPA-203ENST00000485042 hCG_2014768A0A024R1R8 64 aa6.24□□□□□ -1.41
XPA-203ENST00000485042 PPP1R12AO14974 1030 aaPredicted RBP6.24□□□□□ -1.41
XPA-203ENST00000485042 AOC2O75106 756 aa6.24□□□□□ -1.41
XPA-203ENST00000485042 CD68P34810 354 aaPredicted RBP6.24□□□□□ -1.41
XPA-203ENST00000485042 SSRP1Q08945 709 aaKnown RBP6.24□□□□□ -1.41
XPA-203ENST00000485042 ZC3H12AQ5D1E8 599 aaKnown RBP6.24□□□□□ -1.41
XPA-203ENST00000485042 VHLLQ6RSH7 139 aa6.24□□□□□ -1.41
XPA-203ENST00000485042 UNC5AQ6ZN44 842 aa6.24□□□□□ -1.41
XPA-203ENST00000485042 FILIP1Q7Z7B0 1213 aa6.24□□□□□ -1.41
XPA-203ENST00000485042 GALNT11Q8NCW6 608 aa6.24□□□□□ -1.41
XPA-203ENST00000485042 THAP3Q8WTV1 239 aaPredicted RBP6.24□□□□□ -1.41
XPA-203ENST00000485042 GPATCH3Q96I76 525 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms