RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 FAM173BQ6P4H8 233 aa19.53■□□□□ 0.72
CTSA-207ENST00000484855 AMOTL1Q8IY63 956 aa19.53■□□□□ 0.72
CTSA-207ENST00000484855 TGFBRAP1Q8WUH2 860 aa19.53■□□□□ 0.72
CTSA-207ENST00000484855 FAM163AQ96GL9 167 aaPredicted RBP19.53■□□□□ 0.72
CTSA-207ENST00000484855 ZNF219Q9P2Y4 722 aaPredicted RBP19.53■□□□□ 0.72
CTSA-207ENST00000484855 SUGT1Q9Y2Z0 365 aa19.53■□□□□ 0.72
CTSA-207ENST00000484855 GAKO14976 1311 aa19.52■□□□□ 0.72
CTSA-207ENST00000484855 PDE4BQ07343 736 aa19.52■□□□□ 0.72
CTSA-207ENST00000484855 IQCA1Q86XH1 822 aa19.52■□□□□ 0.72
CTSA-207ENST00000484855 ZSCAN10Q96SZ4 725 aaPredicted RBP19.52■□□□□ 0.72
CTSA-207ENST00000484855 MYH6P13533 1939 aa19.52■□□□□ 0.72
CTSA-207ENST00000484855 SEC23AQ15436 765 aa19.51■□□□□ 0.71
CTSA-207ENST00000484855 ZNF646O15015 1829 aaPredicted RBP19.51■□□□□ 0.71
CTSA-207ENST00000484855 GOLGA6L3A6NEY3 463 aa19.51■□□□□ 0.71
CTSA-207ENST00000484855 GUCY1B3Q02153 619 aa19.51■□□□□ 0.71
CTSA-207ENST00000484855 SLC4A8Q2Y0W8 1093 aa19.51■□□□□ 0.71
CTSA-207ENST00000484855 C12orf60Q5U649 245 aa19.51■□□□□ 0.71
CTSA-207ENST00000484855 TEX11Q8IYF3 940 aa19.51■□□□□ 0.71
CTSA-207ENST00000484855 C8orf76Q96K31 380 aa19.51■□□□□ 0.71
CTSA-207ENST00000484855 RBM27Q9P2N5 1060 aaKnown RBP19.51■□□□□ 0.71
CTSA-207ENST00000484855 ADAMTSL1Q8N6G6 1762 aa19.51■□□□□ 0.71
CTSA-207ENST00000484855 ROBO3Q96MS0 1386 aa19.5■□□□□ 0.71
CTSA-207ENST00000484855 RCAN1P53805 252 aa19.5■□□□□ 0.71
CTSA-207ENST00000484855 UBE2HP62256 183 aa19.5■□□□□ 0.71
CTSA-207ENST00000484855 MAPKAPK5Q8IW41 473 aa19.5■□□□□ 0.71
CTSA-207ENST00000484855 ZNF654Q8IZM8 581 aa19.5■□□□□ 0.71
CTSA-207ENST00000484855 ENAHQ8N8S7 591 aaPredicted RBP19.5■□□□□ 0.71
CTSA-207ENST00000484855 FAM217BQ9NTX9 383 aaPredicted RBP19.5■□□□□ 0.71
CTSA-207ENST00000484855 SCN9AQ15858 1988 aa19.5■□□□□ 0.71
CTSA-207ENST00000484855 RTN1Q16799 776 aa19.5■□□□□ 0.71
CTSA-207ENST00000484855 CERS5Q8N5B7 392 aa19.5■□□□□ 0.71
CTSA-207ENST00000484855 DBNDD1Q9H9R9 158 aa19.5■□□□□ 0.71
CTSA-207ENST00000484855 DAGLAQ9Y4D2 1042 aa19.5■□□□□ 0.71
CTSA-207ENST00000484855 KIF13BQ9NQT8 1826 aa19.49■□□□□ 0.71
CTSA-207ENST00000484855 F8W031 263 aaPredicted RBP19.49■□□□□ 0.71
CTSA-207ENST00000484855 ZSCAN23Q3MJ62 389 aa19.49■□□□□ 0.71
CTSA-207ENST00000484855 IFIT1BQ5T764 474 aaKnown RBP19.49■□□□□ 0.71
CTSA-207ENST00000484855 PODNQ7Z5L7 613 aa19.49■□□□□ 0.71
CTSA-207ENST00000484855 SLC16A10Q8TF71 515 aa19.49■□□□□ 0.71
CTSA-207ENST00000484855 FSD2A1L4K1 749 aa19.49■□□□□ 0.71
CTSA-207ENST00000484855 NTRK3Q16288 839 aa19.49■□□□□ 0.71
CTSA-207ENST00000484855 PHKBQ93100 1093 aa19.49■□□□□ 0.71
CTSA-207ENST00000484855 SCAND2PQ9GZW5 306 aaPredicted RBP19.49■□□□□ 0.71
CTSA-207ENST00000484855 TMEM63CQ9P1W3 806 aa19.49■□□□□ 0.71
CTSA-207ENST00000484855 TTF2Q9UNY4 1162 aaKnown RBP19.49■□□□□ 0.71
CTSA-207ENST00000484855 POLR3DP05423 398 aaPredicted RBP19.48■□□□□ 0.71
CTSA-207ENST00000484855 IARSP41252 1262 aaKnown RBP19.48■□□□□ 0.71
CTSA-207ENST00000484855 RHBDL3P58872 404 aa19.48■□□□□ 0.71
CTSA-207ENST00000484855 L1TD1Q5T7N2 865 aaKnown RBP19.48■□□□□ 0.71
CTSA-207ENST00000484855 TTC6Q86TZ1 520 aa19.48■□□□□ 0.71
CTSA-207ENST00000484855 NUP133Q8WUM0 1156 aa19.48■□□□□ 0.71
CTSA-207ENST00000484855 C7orf43Q8WVR3 580 aa19.48■□□□□ 0.71
CTSA-207ENST00000484855 SAP30BPQ9UHR5 308 aaKnown RBP19.48■□□□□ 0.71
CTSA-207ENST00000484855 ELP1O95163 1332 aa19.48■□□□□ 0.71
CTSA-207ENST00000484855 STK36Q9NRP7 1315 aa19.48■□□□□ 0.71
CTSA-207ENST00000484855 SNED1Q8TER0 1413 aa19.47■□□□□ 0.71
CTSA-207ENST00000484855 TSPY2A6NKD2 308 aa19.47■□□□□ 0.71
CTSA-207ENST00000484855 FAM47AQ5JRC9 791 aa19.47■□□□□ 0.71
CTSA-207ENST00000484855 CC2D2BQ6DHV5 1058 aa19.47■□□□□ 0.71
CTSA-207ENST00000484855 FBXO18Q8NFZ0 1043 aa19.47■□□□□ 0.71
CTSA-207ENST00000484855 MXD3Q9BW11 206 aa19.47■□□□□ 0.71
CTSA-207ENST00000484855 ISY1Q9ULR0 285 aaKnown RBP19.47■□□□□ 0.71
CTSA-207ENST00000484855 FLT1P17948 1338 aa19.47■□□□□ 0.71
CTSA-207ENST00000484855 CCDC196A0A1B0GTZ2 297 aa19.47■□□□□ 0.71
CTSA-207ENST00000484855 NT5C2P49902 561 aa19.47■□□□□ 0.71
CTSA-207ENST00000484855 OTUD7BQ6GQQ9 843 aa19.47■□□□□ 0.71
CTSA-207ENST00000484855 SYAP1Q96A49 352 aaPredicted RBP19.47■□□□□ 0.71
CTSA-207ENST00000484855 SPATA32Q96LK8 384 aa19.47■□□□□ 0.71
CTSA-207ENST00000484855 ALG1Q9BT22 464 aa19.47■□□□□ 0.71
CTSA-207ENST00000484855 TFIP11Q9UBB9 837 aaKnown RBP19.47■□□□□ 0.71
CTSA-207ENST00000484855 ECE2O60344 883 aa19.46■□□□□ 0.71
CTSA-207ENST00000484855 IFNAR1P17181 557 aa19.46■□□□□ 0.71
CTSA-207ENST00000484855 SSRP1Q08945 709 aaKnown RBP19.46■□□□□ 0.71
CTSA-207ENST00000484855 TPRNQ4KMQ1 711 aa19.46■□□□□ 0.71
CTSA-207ENST00000484855 CATIPQ7Z7H3 387 aa19.46■□□□□ 0.71
CTSA-207ENST00000484855 FANCBQ8NB91 859 aa19.46■□□□□ 0.71
CTSA-207ENST00000484855 RGS22Q8NE09 1264 aa19.46■□□□□ 0.71
CTSA-207ENST00000484855 DYNLL2Q96FJ2 89 aa19.46■□□□□ 0.71
CTSA-207ENST00000484855 MYH8P13535 1937 aa19.46■□□□□ 0.71
CTSA-207ENST00000484855 ZNF445P59923 1031 aa19.46■□□□□ 0.71
CTSA-207ENST00000484855 SLC26A6Q9BXS9 759 aa19.46■□□□□ 0.71
CTSA-207ENST00000484855 CFAP45Q9UL16 551 aa19.46■□□□□ 0.71
CTSA-207ENST00000484855 FMNL1O95466 1100 aaPredicted RBP19.45■□□□□ 0.7
CTSA-207ENST00000484855 MKNK2Q9HBH9 465 aa19.45■□□□□ 0.7
CTSA-207ENST00000484855 PSME4Q14997 1843 aa19.45■□□□□ 0.7
CTSA-207ENST00000484855 NMT2O60551 498 aa19.44■□□□□ 0.7
CTSA-207ENST00000484855 PLCD1P51178 756 aa19.44■□□□□ 0.7
CTSA-207ENST00000484855 PPP2R5BQ15173 497 aa19.44■□□□□ 0.7
CTSA-207ENST00000484855 TRIM22Q8IYM9 498 aa19.44■□□□□ 0.7
CTSA-207ENST00000484855 SUPT20HQ8NEM7 779 aa19.44■□□□□ 0.7
CTSA-207ENST00000484855 LEO1Q8WVC0 666 aaPredicted RBP19.44■□□□□ 0.7
CTSA-207ENST00000484855 AIFM3Q96NN9 605 aa19.44■□□□□ 0.7
CTSA-207ENST00000484855 C21orf2O43822 256 aa19.44■□□□□ 0.7
CTSA-207ENST00000484855 SCNN1DP51172 638 aa19.44■□□□□ 0.7
CTSA-207ENST00000484855 AOC3Q16853 763 aa19.44■□□□□ 0.7
CTSA-207ENST00000484855 CCDC125Q86Z20 511 aa19.44■□□□□ 0.7
CTSA-207ENST00000484855 TTLL6Q8N841 843 aa19.44■□□□□ 0.7
CTSA-207ENST00000484855 KCNQ5Q9NR82 932 aa19.44■□□□□ 0.7
CTSA-207ENST00000484855 GJB4Q9NTQ9 266 aa19.44■□□□□ 0.7
CTSA-207ENST00000484855 DDAH1O94760 285 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms