RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 NAPAP54920 295 aa16.93■□□□□ 0.3
RXRA-203ENST00000484822 RAPGEF1Q13905 1077 aa16.93■□□□□ 0.3
RXRA-203ENST00000484822 JAKMIP2Q96AA8 810 aa16.93■□□□□ 0.3
RXRA-203ENST00000484822 ANKRD2Q9GZV1 360 aa16.93■□□□□ 0.3
RXRA-203ENST00000484822 A6NNZ2 444 aa16.93■□□□□ 0.3
RXRA-203ENST00000484822 MTX1Q13505 466 aa16.93■□□□□ 0.3
RXRA-203ENST00000484822 TUBB8Q3ZCM7 444 aa16.93■□□□□ 0.3
RXRA-203ENST00000484822 G2E3Q7L622 706 aa16.93■□□□□ 0.3
RXRA-203ENST00000484822 CCNL1Q9UK58 526 aaPredicted RBP16.93■□□□□ 0.3
RXRA-203ENST00000484822 KCNH3Q9ULD8 1083 aa16.93■□□□□ 0.3
RXRA-203ENST00000484822 KIAA0232Q92628 1395 aa16.93■□□□□ 0.3
RXRA-203ENST00000484822 KRT2P35908 639 aa16.93■□□□□ 0.3
RXRA-203ENST00000484822 CAPN7Q9Y6W3 813 aa16.93■□□□□ 0.3
RXRA-203ENST00000484822 MICAL1Q8TDZ2 1067 aa16.92■□□□□ 0.3
RXRA-203ENST00000484822 NOC4LQ9BVI4 516 aaKnown RBP16.92■□□□□ 0.3
RXRA-203ENST00000484822 KDM5CP41229 1560 aa16.92■□□□□ 0.3
RXRA-203ENST00000484822 ROBO2Q9HCK4 1378 aa16.92■□□□□ 0.3
RXRA-203ENST00000484822 PPFIA1Q13136 1202 aa16.92■□□□□ 0.3
RXRA-203ENST00000484822 OTUD7BQ6GQQ9 843 aa16.92■□□□□ 0.3
RXRA-203ENST00000484822 GPIHBP1Q8IV16 184 aa16.92■□□□□ 0.3
RXRA-203ENST00000484822 DDX23Q9BUQ8 820 aaKnown RBP16.92■□□□□ 0.3
RXRA-203ENST00000484822 BICC1Q9H694 974 aaKnown RBP16.92■□□□□ 0.3
RXRA-203ENST00000484822 SWAP70Q9UH65 585 aa16.92■□□□□ 0.3
RXRA-203ENST00000484822 ANAPC4Q9UJX5 808 aa16.92■□□□□ 0.3
RXRA-203ENST00000484822 NOL3O60936 208 aaKnown RBP16.92■□□□□ 0.3
RXRA-203ENST00000484822 CEP85LQ5SZL2 805 aa16.92■□□□□ 0.3
RXRA-203ENST00000484822 KRT79Q5XKE5 535 aa16.92■□□□□ 0.3
RXRA-203ENST00000484822 VSIG1Q86XK7 387 aa16.92■□□□□ 0.3
RXRA-203ENST00000484822 NFE2L3Q9Y4A8 694 aa16.92■□□□□ 0.3
RXRA-203ENST00000484822 SNX14Q9Y5W7 946 aa16.92■□□□□ 0.3
RXRA-203ENST00000484822 E7EVH7 732 aa16.92■□□□□ 0.3
RXRA-203ENST00000484822 TSPY3P0CV98 308 aa16.92■□□□□ 0.3
RXRA-203ENST00000484822 TSPY8P0CW00 308 aa16.92■□□□□ 0.3
RXRA-203ENST00000484822 ANO1Q5XXA6 986 aa16.92■□□□□ 0.3
RXRA-203ENST00000484822 IFT20Q8IY31 132 aa16.92■□□□□ 0.3
RXRA-203ENST00000484822 KIAA1524Q8TCG1 905 aa16.92■□□□□ 0.3
RXRA-203ENST00000484822 GIGYF1O75420 1035 aaPredicted RBP16.91■□□□□ 0.3
RXRA-203ENST00000484822 NAA16Q6N069 864 aaPredicted RBP16.91■□□□□ 0.3
RXRA-203ENST00000484822 NCOA5Q9HCD5 579 aaKnown RBP16.91■□□□□ 0.3
RXRA-203ENST00000484822 MTUS1Q9ULD2 1270 aa16.91■□□□□ 0.3
RXRA-203ENST00000484822 KRT9P35527 623 aa16.91■□□□□ 0.3
RXRA-203ENST00000484822 ARL1P40616 181 aaPredicted RBP16.91■□□□□ 0.3
RXRA-203ENST00000484822 TACO1Q9BSH4 297 aaKnown RBP16.91■□□□□ 0.3
RXRA-203ENST00000484822 SH3TC1Q8TE82 1336 aa16.91■□□□□ 0.3
RXRA-203ENST00000484822 RPS6KB1P23443 525 aa16.91■□□□□ 0.3
RXRA-203ENST00000484822 HOOK2Q96ED9 719 aa16.91■□□□□ 0.3
RXRA-203ENST00000484822 LIG3P49916 1009 aa16.91■□□□□ 0.3
RXRA-203ENST00000484822 MAP7D1Q3KQU3 841 aa16.91■□□□□ 0.3
RXRA-203ENST00000484822 GPR161Q8N6U8 529 aaKnown RBP16.91■□□□□ 0.3
RXRA-203ENST00000484822 MRRFQ96E11 262 aaKnown RBP16.91■□□□□ 0.3
RXRA-203ENST00000484822 SLF1Q9BQI6 1058 aa16.91■□□□□ 0.3
RXRA-203ENST00000484822 XPO4Q9C0E2 1151 aaKnown RBP16.91■□□□□ 0.3
RXRA-203ENST00000484822 IQGAP3Q86VI3 1631 aa16.9■□□□□ 0.3
RXRA-203ENST00000484822 RNF113AO15541 343 aaKnown RBP16.9■□□□□ 0.3
RXRA-203ENST00000484822 PLCG2P16885 1265 aa16.9■□□□□ 0.3
RXRA-203ENST00000484822 ZNF174Q15697 407 aa16.9■□□□□ 0.3
RXRA-203ENST00000484822 DTHD1Q6ZMT9 781 aa16.9■□□□□ 0.3
RXRA-203ENST00000484822 ZC3H12CQ9C0D7 883 aaKnown RBP16.9■□□□□ 0.3
RXRA-203ENST00000484822 CIB2O75838 187 aa16.9■□□□□ 0.3
RXRA-203ENST00000484822 DMTNQ08495 405 aa16.9■□□□□ 0.3
RXRA-203ENST00000484822 CDC37L1Q7L3B6 337 aa16.9■□□□□ 0.3
RXRA-203ENST00000484822 FAM114A2Q9NRY5 505 aa16.9■□□□□ 0.3
RXRA-203ENST00000484822 SYNMO15061 1565 aa16.9■□□□□ 0.3
RXRA-203ENST00000484822 FAM98CQ17RN3 349 aaKnown RBP16.9■□□□□ 0.3
RXRA-203ENST00000484822 ARHGEF2Q92974 986 aaKnown RBP16.9■□□□□ 0.3
RXRA-203ENST00000484822 SECISBP2LQ93073 1101 aaKnown RBP16.9■□□□□ 0.3
RXRA-203ENST00000484822 ZNF202O95125 648 aa16.9■□□□□ 0.3
RXRA-203ENST00000484822 EIF4A1P60842 406 aaKnown RBP16.9■□□□□ 0.3
RXRA-203ENST00000484822 TSNAXIP1Q2TAA8 658 aa16.9■□□□□ 0.3
RXRA-203ENST00000484822 KLHL7Q8IXQ5 586 aa16.9■□□□□ 0.3
RXRA-203ENST00000484822 PLEKHA4Q9H4M7 779 aa16.9■□□□□ 0.3
RXRA-203ENST00000484822 PLA2R1Q13018 1463 aa16.89■□□□□ 0.29
RXRA-203ENST00000484822 GCKP35557 465 aa16.89■□□□□ 0.29
RXRA-203ENST00000484822 RUFY4Q6ZNE9 571 aa16.89■□□□□ 0.29
RXRA-203ENST00000484822 LRRC45Q96CN5 670 aa16.89■□□□□ 0.29
RXRA-203ENST00000484822 MYCBPQ99417 103 aaPredicted RBP16.89■□□□□ 0.29
RXRA-203ENST00000484822 CALML3P27482 149 aa16.89■□□□□ 0.29
RXRA-203ENST00000484822 GNAQP50148 359 aa16.89■□□□□ 0.29
RXRA-203ENST00000484822 TRIM14Q14142 442 aa16.89■□□□□ 0.29
RXRA-203ENST00000484822 UAP1Q16222 522 aaPredicted RBP16.89■□□□□ 0.29
RXRA-203ENST00000484822 RBM17Q96I25 401 aaKnown RBP16.89■□□□□ 0.29
RXRA-203ENST00000484822 PPANQ9NQ55 473 aaKnown RBP16.89■□□□□ 0.29
RXRA-203ENST00000484822 USP21Q9UK80 565 aa16.89■□□□□ 0.29
RXRA-203ENST00000484822 POLR2DO15514 142 aaKnown RBP16.89■□□□□ 0.29
RXRA-203ENST00000484822 BRD1O95696 1058 aa16.89■□□□□ 0.29
RXRA-203ENST00000484822 TFCP2Q12800 502 aa16.89■□□□□ 0.29
RXRA-203ENST00000484822 CCDC38Q502W7 563 aa16.89■□□□□ 0.29
RXRA-203ENST00000484822 RAB3IL1Q8TBN0 382 aa16.89■□□□□ 0.29
RXRA-203ENST00000484822 CCDC87Q9NVE4 849 aa16.89■□□□□ 0.29
RXRA-203ENST00000484822 GNAT2P19087 354 aa16.89■□□□□ 0.29
RXRA-203ENST00000484822 GBP1P32455 592 aa16.89■□□□□ 0.29
RXRA-203ENST00000484822 DCAF17Q5H9S7 520 aaPredicted RBP16.89■□□□□ 0.29
RXRA-203ENST00000484822 TMTC1Q8IUR5 882 aa16.89■□□□□ 0.29
RXRA-203ENST00000484822 RAD50Q92878 1312 aa16.89■□□□□ 0.29
RXRA-203ENST00000484822 ZNF131P52739 623 aa16.88■□□□□ 0.29
RXRA-203ENST00000484822 NLRP12P59046 1061 aa16.88■□□□□ 0.29
RXRA-203ENST00000484822 USP37Q86T82 979 aa16.88■□□□□ 0.29
RXRA-203ENST00000484822 ZNF496Q96IT1 587 aaPredicted RBP16.88■□□□□ 0.29
RXRA-203ENST00000484822 TRAF5O00463 557 aa16.88■□□□□ 0.29
RXRA-203ENST00000484822 TPD52P55327 224 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms