RNA–Protein interactions for RNA: ENST00000484752.5

RFTN1-210, Transcript of raftlin, lipid raft linker 1, human

TSL 4

Gene RFTN1, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFTN1-210	ENST00000484752	SHTN1	A0MZ66	631 aa		13.68	□□□□□ -0.22
RFTN1-210	ENST00000484752	ERICH2	A1L162	156 aa		13.68	□□□□□ -0.22
RFTN1-210	ENST00000484752	EPHX2	P34913	555 aa		13.68	□□□□□ -0.22
RFTN1-210	ENST00000484752	CCDC178	Q5BJE1	867 aa		13.68	□□□□□ -0.22
RFTN1-210	ENST00000484752	RRP12	Q5JTH9	1297 aa	Known RBP	13.68	□□□□□ -0.22
RFTN1-210	ENST00000484752	DHX32	Q7L7V1	743 aa	Known RBP	13.68	□□□□□ -0.22
RFTN1-210	ENST00000484752	TBC1D10C	Q8IV04	446 aa		13.68	□□□□□ -0.22
RFTN1-210	ENST00000484752	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.68	□□□□□ -0.22
RFTN1-210	ENST00000484752	HSCB	Q8IWL3	235 aa		13.68	□□□□□ -0.22
RFTN1-210	ENST00000484752	ZC3H15	Q8WU90	426 aa	Known RBP	13.68	□□□□□ -0.22
RFTN1-210	ENST00000484752	DCPS	Q96C86	337 aa	Known RBP	13.68	□□□□□ -0.22
RFTN1-210	ENST00000484752	CSRNP1	Q96S65	589 aa		13.68	□□□□□ -0.22
RFTN1-210	ENST00000484752	ZSWIM6	Q9HCJ5	1215 aa		13.68	□□□□□ -0.22
RFTN1-210	ENST00000484752	PDRG1	Q9NUG6	133 aa		13.68	□□□□□ -0.22
RFTN1-210	ENST00000484752	FAM198A	Q9UFP1	575 aa		13.68	□□□□□ -0.22
RFTN1-210	ENST00000484752	LAMB1	P07942	1786 aa		13.68	□□□□□ -0.22
RFTN1-210	ENST00000484752	FOCAD	Q5VW36	1801 aa		13.67	□□□□□ -0.22
RFTN1-210	ENST00000484752	ECM29	Q5VYK3	1845 aa		13.67	□□□□□ -0.22
RFTN1-210	ENST00000484752	ORC4	O43929	436 aa		13.67	□□□□□ -0.22
RFTN1-210	ENST00000484752	RPS6KB1	P23443	525 aa		13.67	□□□□□ -0.22
RFTN1-210	ENST00000484752	SLC4A8	Q2Y0W8	1093 aa		13.67	□□□□□ -0.22
RFTN1-210	ENST00000484752	ADCK5	Q3MIX3	580 aa		13.67	□□□□□ -0.22
RFTN1-210	ENST00000484752	PPP4R3B	Q5MIZ7	849 aa		13.67	□□□□□ -0.22
RFTN1-210	ENST00000484752	ANGEL2	Q5VTE6	544 aa	Known RBP	13.67	□□□□□ -0.22
RFTN1-210	ENST00000484752	C16orf86	Q6ZW13	317 aa		13.67	□□□□□ -0.22
RFTN1-210	ENST00000484752	IQCA1	Q86XH1	822 aa		13.67	□□□□□ -0.22
RFTN1-210	ENST00000484752	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.67	□□□□□ -0.22
RFTN1-210	ENST00000484752	TRPM4	Q8TD43	1214 aa		13.67	□□□□□ -0.22
RFTN1-210	ENST00000484752	KIF2C	Q99661	725 aa		13.67	□□□□□ -0.22
RFTN1-210	ENST00000484752	UBAC1	Q9BSL1	405 aa		13.67	□□□□□ -0.22
RFTN1-210	ENST00000484752	MTA3	Q9BTC8	594 aa		13.67	□□□□□ -0.22
RFTN1-210	ENST00000484752	UPF3B	Q9BZI7	483 aa	Known RBP	13.67	□□□□□ -0.22
RFTN1-210	ENST00000484752	GGA3	Q9NZ52	723 aa		13.67	□□□□□ -0.22
RFTN1-210	ENST00000484752	HERC5	Q9UII4	1024 aa	Known RBP	13.67	□□□□□ -0.22
RFTN1-210	ENST00000484752	CYP2D7	A0A087X1C5	515 aa		13.66	□□□□□ -0.22
RFTN1-210	ENST00000484752	TSPY2	A6NKD2	308 aa		13.66	□□□□□ -0.22
RFTN1-210	ENST00000484752	RANBP6	O60518	1105 aa	Known RBP	13.66	□□□□□ -0.22
RFTN1-210	ENST00000484752	FGR	P09769	529 aa		13.66	□□□□□ -0.22
RFTN1-210	ENST00000484752	CYP2D6	P10635	497 aa		13.66	□□□□□ -0.22
RFTN1-210	ENST00000484752	PLCD1	P51178	756 aa		13.66	□□□□□ -0.22
RFTN1-210	ENST00000484752	STOX1	Q6ZVD7	989 aa		13.66	□□□□□ -0.22
RFTN1-210	ENST00000484752	SULF1	Q8IWU6	871 aa		13.66	□□□□□ -0.22
RFTN1-210	ENST00000484752	TMEM87B	Q96K49	555 aa		13.66	□□□□□ -0.22
RFTN1-210	ENST00000484752	DDX60L	Q5H9U9	1706 aa	Known RBP	13.66	□□□□□ -0.22
RFTN1-210	ENST00000484752	NEDD4	P46934	1319 aa		13.65	□□□□□ -0.22
RFTN1-210	ENST00000484752	WDR90	Q96KV7	1748 aa		13.65	□□□□□ -0.22
RFTN1-210	ENST00000484752	SCN4A	P35499	1836 aa		13.65	□□□□□ -0.22
RFTN1-210	ENST00000484752		B4E1Z4	1266 aa		13.65	□□□□□ -0.22
RFTN1-210	ENST00000484752	KDM4A	O75164	1064 aa		13.65	□□□□□ -0.22
RFTN1-210	ENST00000484752	EGFR	P00533	1210 aa		13.65	□□□□□ -0.22
RFTN1-210	ENST00000484752	TSPY3	P0CV98	308 aa		13.65	□□□□□ -0.22
RFTN1-210	ENST00000484752	TSPY8	P0CW00	308 aa		13.65	□□□□□ -0.22
RFTN1-210	ENST00000484752	VEGFA	P15692	232 aa	Predicted RBP	13.65	□□□□□ -0.22
RFTN1-210	ENST00000484752	CDK8	P49336	464 aa		13.65	□□□□□ -0.22
RFTN1-210	ENST00000484752	RASA3	Q14644	834 aa		13.65	□□□□□ -0.22
RFTN1-210	ENST00000484752	DCAF15	Q66K64	600 aa		13.65	□□□□□ -0.22
RFTN1-210	ENST00000484752	STK11IP	Q8N1F8	1099 aa		13.65	□□□□□ -0.22
RFTN1-210	ENST00000484752	CCDC17	Q96LX7	622 aa		13.65	□□□□□ -0.22
RFTN1-210	ENST00000484752	NBPF3	Q9H094	633 aa		13.65	□□□□□ -0.22
RFTN1-210	ENST00000484752	DEFB129	Q9H1M3	183 aa		13.65	□□□□□ -0.22
RFTN1-210	ENST00000484752	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.65	□□□□□ -0.22
RFTN1-210	ENST00000484752	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	13.65	□□□□□ -0.22
RFTN1-210	ENST00000484752	CNTNAP1	P78357	1384 aa		13.64	□□□□□ -0.23
RFTN1-210	ENST00000484752	DDTL	A6NHG4	134 aa	Predicted RBP	13.64	□□□□□ -0.23
RFTN1-210	ENST00000484752	PRC1	O43663	620 aa		13.64	□□□□□ -0.23
RFTN1-210	ENST00000484752	SUPT20HL1	Q3ZLR7	823 aa		13.64	□□□□□ -0.23
RFTN1-210	ENST00000484752	EAPP	Q56P03	285 aa	Predicted RBP	13.64	□□□□□ -0.23
RFTN1-210	ENST00000484752	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.64	□□□□□ -0.23
RFTN1-210	ENST00000484752	TMTC2	Q8N394	836 aa		13.64	□□□□□ -0.23
RFTN1-210	ENST00000484752	SNX21	Q969T3	373 aa		13.64	□□□□□ -0.23
RFTN1-210	ENST00000484752	CHMP4C	Q96CF2	233 aa		13.64	□□□□□ -0.23
RFTN1-210	ENST00000484752	DYNLL2	Q96FJ2	89 aa		13.64	□□□□□ -0.23
RFTN1-210	ENST00000484752	TMEM39B	Q9GZU3	492 aa		13.64	□□□□□ -0.23
RFTN1-210	ENST00000484752	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.64	□□□□□ -0.23
RFTN1-210	ENST00000484752	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.64	□□□□□ -0.23
RFTN1-210	ENST00000484752	CDK5RAP2	Q96SN8	1893 aa		13.63	□□□□□ -0.23
RFTN1-210	ENST00000484752	MYH1	P12882	1939 aa		13.63	□□□□□ -0.23
RFTN1-210	ENST00000484752	TBC1D12	O60347	775 aa		13.63	□□□□□ -0.23
RFTN1-210	ENST00000484752	PRDM1	O75626	825 aa		13.63	□□□□□ -0.23
RFTN1-210	ENST00000484752	NF2	P35240	595 aa		13.63	□□□□□ -0.23
RFTN1-210	ENST00000484752	GABPA	Q06546	454 aa		13.63	□□□□□ -0.23
RFTN1-210	ENST00000484752	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
RFTN1-210	ENST00000484752	TAF6L	Q9Y6J9	622 aa		13.63	□□□□□ -0.23
RFTN1-210	ENST00000484752	IFIT3	O14879	490 aa	Known RBP	13.62	□□□□□ -0.23
RFTN1-210	ENST00000484752	HIRA	P54198	1017 aa	Predicted RBP	13.62	□□□□□ -0.23
RFTN1-210	ENST00000484752	TFAP4	Q01664	338 aa		13.62	□□□□□ -0.23
RFTN1-210	ENST00000484752	EXOSC10	Q01780	885 aa	Known RBP	13.62	□□□□□ -0.23
RFTN1-210	ENST00000484752	TMEM67	Q5HYA8	995 aa		13.62	□□□□□ -0.23
RFTN1-210	ENST00000484752	SYNE3	Q6ZMZ3	975 aa		13.62	□□□□□ -0.23
RFTN1-210	ENST00000484752		Q6ZUG5	572 aa		13.62	□□□□□ -0.23
RFTN1-210	ENST00000484752	METTL16	Q86W50	562 aa	Known RBP	13.62	□□□□□ -0.23
RFTN1-210	ENST00000484752	ZFPM1	Q8IX07	1006 aa		13.62	□□□□□ -0.23
RFTN1-210	ENST00000484752	FBXL16	Q8N461	479 aa		13.62	□□□□□ -0.23
RFTN1-210	ENST00000484752	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.62	□□□□□ -0.23
RFTN1-210	ENST00000484752	CABP5	Q9NP86	173 aa		13.62	□□□□□ -0.23
RFTN1-210	ENST00000484752	ANGEL1	Q9UNK9	670 aa	Known RBP	13.62	□□□□□ -0.23
RFTN1-210	ENST00000484752	CLEC11A	Q9Y240	323 aa		13.62	□□□□□ -0.23
RFTN1-210	ENST00000484752	CCDC69	A6NI79	296 aa		13.61	□□□□□ -0.23
RFTN1-210	ENST00000484752		K7ELQ4	463 aa	Predicted RBP	13.61	□□□□□ -0.23
RFTN1-210	ENST00000484752	MPHOSPH10	O00566	681 aa	Known RBP	13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms