RNA–Protein interactions for RNA: ENST00000484704.5

HLA-F-226, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,201 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-226ENST00000484704 PPIL2Q13356 520 aa18.22■□□□□ 0.51
HLA-F-226ENST00000484704 ADGRA1Q86SQ6 560 aa18.22■□□□□ 0.51
HLA-F-226ENST00000484704 FAM43AQ8N2R8 423 aa18.22■□□□□ 0.51
HLA-F-226ENST00000484704 PAG1Q9NWQ8 432 aa18.22■□□□□ 0.51
HLA-F-226ENST00000484704 KIAA0100Q14667 2235 aaKnown RBP18.21■□□□□ 0.51
HLA-F-226ENST00000484704 ATP5JP18859 108 aa18.21■□□□□ 0.51
HLA-F-226ENST00000484704 TAF1CQ15572 869 aaPredicted RBP18.21■□□□□ 0.51
HLA-F-226ENST00000484704 NOL9Q5SY16 702 aaKnown RBP18.21■□□□□ 0.51
HLA-F-226ENST00000484704 SLC9C2Q5TAH2 1124 aa18.21■□□□□ 0.51
HLA-F-226ENST00000484704 SCYL3Q8IZE3 742 aa18.21■□□□□ 0.51
HLA-F-226ENST00000484704 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.21■□□□□ 0.51
HLA-F-226ENST00000484704 DHX36Q9H2U1 1008 aaKnown RBP18.21■□□□□ 0.51
HLA-F-226ENST00000484704 PTCH2Q9Y6C5 1203 aa18.21■□□□□ 0.51
HLA-F-226ENST00000484704 IRF6O14896 467 aa18.2■□□□□ 0.5
HLA-F-226ENST00000484704 HLA-DOAP06340 250 aa18.2■□□□□ 0.5
HLA-F-226ENST00000484704 CRACR2BQ8N4Y2 399 aaPredicted RBP18.2■□□□□ 0.5
HLA-F-226ENST00000484704 ZNF333Q96JL9 665 aa18.2■□□□□ 0.5
HLA-F-226ENST00000484704 SAP30BPQ9UHR5 308 aaKnown RBP18.2■□□□□ 0.5
HLA-F-226ENST00000484704 PCDHB15Q9Y5E8 787 aa18.2■□□□□ 0.5
HLA-F-226ENST00000484704 ATRNL1Q5VV63 1379 aa18.19■□□□□ 0.5
HLA-F-226ENST00000484704 MAGEB6P1A0A0J9YX57 407 aa18.19■□□□□ 0.5
HLA-F-226ENST00000484704 CTNND1O60716 968 aaKnown RBP18.19■□□□□ 0.5
HLA-F-226ENST00000484704 TMEM106CQ9BVX2 250 aa18.19■□□□□ 0.5
HLA-F-226ENST00000484704 ARHGAP39Q9C0H5 1083 aa18.19■□□□□ 0.5
HLA-F-226ENST00000484704 ZFYVE28Q9HCC9 887 aa18.19■□□□□ 0.5
HLA-F-226ENST00000484704 PI4KBQ9UBF8 816 aa18.19■□□□□ 0.5
HLA-F-226ENST00000484704 FLT1P17948 1338 aa18.19■□□□□ 0.5
HLA-F-226ENST00000484704 FAM196BA6NMK8 535 aa18.18■□□□□ 0.5
HLA-F-226ENST00000484704 TBC1D12O60347 775 aa18.18■□□□□ 0.5
HLA-F-226ENST00000484704 ECM2O94769 699 aaPredicted RBP18.18■□□□□ 0.5
HLA-F-226ENST00000484704 ZSCAN25Q6NSZ9 544 aa18.18■□□□□ 0.5
HLA-F-226ENST00000484704 EDC3Q96F86 508 aaKnown RBP18.18■□□□□ 0.5
HLA-F-226ENST00000484704 HAUS7Q99871 368 aa18.18■□□□□ 0.5
HLA-F-226ENST00000484704 ECHDC1Q9NTX5 307 aa18.18■□□□□ 0.5
HLA-F-226ENST00000484704 COL2A1P02458 1487 aaPredicted RBP18.18■□□□□ 0.5
HLA-F-226ENST00000484704 ZNF532Q9HCE3 1301 aa18.18■□□□□ 0.5
HLA-F-226ENST00000484704 BRCA2P51587 3418 aa18.17■□□□□ 0.5
HLA-F-226ENST00000484704 SLURP2P0DP57 97 aa18.17■□□□□ 0.5
HLA-F-226ENST00000484704 PDE6AP16499 860 aa18.17■□□□□ 0.5
HLA-F-226ENST00000484704 SLC4A8Q2Y0W8 1093 aa18.17■□□□□ 0.5
HLA-F-226ENST00000484704 SLC9C1Q4G0N8 1177 aa18.17■□□□□ 0.5
HLA-F-226ENST00000484704 SH3TC2Q8TF17 1288 aa18.17■□□□□ 0.5
HLA-F-226ENST00000484704 CRNKL1Q9BZJ0 848 aaKnown RBP18.17■□□□□ 0.5
HLA-F-226ENST00000484704 HERC5Q9UII4 1024 aaKnown RBP18.17■□□□□ 0.5
HLA-F-226ENST00000484704 PALD1Q9ULE6 856 aa18.17■□□□□ 0.5
HLA-F-226ENST00000484704 ZHX2Q9Y6X8 837 aa18.17■□□□□ 0.5
HLA-F-226ENST00000484704 PHF20L1A8MW92 1017 aa18.16■□□□□ 0.5
HLA-F-226ENST00000484704 PTPRAP18433 802 aa18.16■□□□□ 0.5
HLA-F-226ENST00000484704 FXR1P51114 621 aaKnown RBP eCLIP18.16■□□□□ 0.5
HLA-F-226ENST00000484704 MAP3K10Q02779 954 aa18.16■□□□□ 0.5
HLA-F-226ENST00000484704 FOXP4Q8IVH2 680 aaPredicted RBP18.16■□□□□ 0.5
HLA-F-226ENST00000484704 COLQQ9Y215 455 aaPredicted RBP18.16■□□□□ 0.5
HLA-F-226ENST00000484704 LAMB1P07942 1786 aa18.16■□□□□ 0.5
HLA-F-226ENST00000484704 BTBD19C9JJ37 291 aa18.15■□□□□ 0.5
HLA-F-226ENST00000484704 CXCL11O14625 94 aa18.15■□□□□ 0.5
HLA-F-226ENST00000484704 AAMPQ13685 434 aa18.15■□□□□ 0.5
HLA-F-226ENST00000484704 NBPF11Q86T75 865 aa18.15■□□□□ 0.5
HLA-F-226ENST00000484704 TTC6Q86TZ1 520 aa18.15■□□□□ 0.5
HLA-F-226ENST00000484704 DOCK1Q14185 1865 aa18.14■□□□□ 0.49
HLA-F-226ENST00000484704 ERC2O15083 957 aa18.14■□□□□ 0.49
HLA-F-226ENST00000484704 TLR2O60603 784 aa18.14■□□□□ 0.49
HLA-F-226ENST00000484704 POLR3DP05423 398 aaPredicted RBP18.14■□□□□ 0.49
HLA-F-226ENST00000484704 ANKRD45Q5TZF3 282 aa18.14■□□□□ 0.49
HLA-F-226ENST00000484704 GADL1Q6ZQY3 521 aa18.14■□□□□ 0.49
HLA-F-226ENST00000484704 ZCCHC17Q9NP64 241 aaKnown RBP18.14■□□□□ 0.49
HLA-F-226ENST00000484704 KCNH4Q9UQ05 1017 aa18.14■□□□□ 0.49
HLA-F-226ENST00000484704 SUPT16HQ9Y5B9 1047 aaKnown RBP18.14■□□□□ 0.49
HLA-F-226ENST00000484704 TRIM75PA6NK02 468 aa18.13■□□□□ 0.49
HLA-F-226ENST00000484704 ADD2P35612 726 aa18.13■□□□□ 0.49
HLA-F-226ENST00000484704 CAP2P40123 477 aa18.13■□□□□ 0.49
HLA-F-226ENST00000484704 ARHGEF6Q15052 776 aa18.13■□□□□ 0.49
HLA-F-226ENST00000484704 TSHZ3Q63HK5 1081 aa18.13■□□□□ 0.49
HLA-F-226ENST00000484704 FASTKD5Q7L8L6 764 aaKnown RBP18.13■□□□□ 0.49
HLA-F-226ENST00000484704 ANKRD23Q86SG2 305 aa18.13■□□□□ 0.49
HLA-F-226ENST00000484704 DDRGK1Q96HY6 314 aa18.13■□□□□ 0.49
HLA-F-226ENST00000484704 AS3MTQ9HBK9 375 aa18.13■□□□□ 0.49
HLA-F-226ENST00000484704 CDK5RAP2Q96SN8 1893 aa18.13■□□□□ 0.49
HLA-F-226ENST00000484704 FOCADQ5VW36 1801 aa18.12■□□□□ 0.49
HLA-F-226ENST00000484704 MYH1P12882 1939 aa18.12■□□□□ 0.49
HLA-F-226ENST00000484704 PDHXO00330 501 aa18.12■□□□□ 0.49
HLA-F-226ENST00000484704 CTGFP29279 349 aa18.12■□□□□ 0.49
HLA-F-226ENST00000484704 LACTBP83111 547 aaPredicted RBP18.12■□□□□ 0.49
HLA-F-226ENST00000484704 AMOTL1Q8IY63 956 aa18.12■□□□□ 0.49
HLA-F-226ENST00000484704 RWDD1Q9H446 243 aaPredicted RBP18.12■□□□□ 0.49
HLA-F-226ENST00000484704 ARMT1Q9H993 441 aa18.12■□□□□ 0.49
HLA-F-226ENST00000484704 MCM9Q9NXL9 1143 aa18.12■□□□□ 0.49
HLA-F-226ENST00000484704 USP17L5A8MUK1 530 aa18.11■□□□□ 0.49
HLA-F-226ENST00000484704 H0YGN5 161 aa18.11■□□□□ 0.49
HLA-F-226ENST00000484704 MBD4O95243 580 aa18.11■□□□□ 0.49
HLA-F-226ENST00000484704 KIF22Q14807 665 aa18.11■□□□□ 0.49
HLA-F-226ENST00000484704 LRRFIP1Q32MZ4 808 aaKnown RBP18.11■□□□□ 0.49
HLA-F-226ENST00000484704 CCDC84Q86UT8 332 aaPredicted RBP18.11■□□□□ 0.49
HLA-F-226ENST00000484704 LCORLQ8N3X6 602 aa18.11■□□□□ 0.49
HLA-F-226ENST00000484704 RIOK1Q9BRS2 568 aaKnown RBP18.11■□□□□ 0.49
HLA-F-226ENST00000484704 TBC1D2Q9BYX2 928 aa18.11■□□□□ 0.49
HLA-F-226ENST00000484704 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.11■□□□□ 0.49
HLA-F-226ENST00000484704 AFG3L2Q9Y4W6 797 aa18.11■□□□□ 0.49
HLA-F-226ENST00000484704 TTC41PQ6P2S7 1318 aa18.11■□□□□ 0.49
HLA-F-226ENST00000484704 RBBP6Q7Z6E9 1792 aaKnown RBP18.1■□□□□ 0.49
HLA-F-226ENST00000484704 TCRBV5S4A2TA0A5A2 114 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms