RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 PRNPP04156 253 aa8.69□□□□□ -1.02
CCDC66-219ENST00000484441 FAM87AP0C7U9 286 aa8.69□□□□□ -1.02
CCDC66-219ENST00000484441 CAP2P40123 477 aa8.69□□□□□ -1.02
CCDC66-219ENST00000484441 ERMP1Q7Z2K6 904 aa8.69□□□□□ -1.02
CCDC66-219ENST00000484441 WNT10AQ9GZT5 417 aa8.69□□□□□ -1.02
CCDC66-219ENST00000484441 RBM47A0AV96 593 aaKnown RBP8.68□□□□□ -1.02
CCDC66-219ENST00000484441 CYP26A1O43174 497 aa8.68□□□□□ -1.02
CCDC66-219ENST00000484441 LMNB1P20700 586 aa8.68□□□□□ -1.02
CCDC66-219ENST00000484441 LMNB2Q03252 620 aa8.68□□□□□ -1.02
CCDC66-219ENST00000484441 TSNAXIP1Q2TAA8 658 aa8.68□□□□□ -1.02
CCDC66-219ENST00000484441 CYP27C1Q4G0S4 372 aa8.68□□□□□ -1.02
CCDC66-219ENST00000484441 LDLRAD1Q5T700 205 aa8.68□□□□□ -1.02
CCDC66-219ENST00000484441 PRAMEF27A3QJZ7 478 aa8.67□□□□□ -1.02
CCDC66-219ENST00000484441 ADAMTS4O75173 837 aa8.67□□□□□ -1.02
CCDC66-219ENST00000484441 LEFTY1O75610 366 aa8.67□□□□□ -1.02
CCDC66-219ENST00000484441 RPL6Q02878 288 aaKnown RBP8.67□□□□□ -1.02
CCDC66-219ENST00000484441 PWP1Q13610 501 aa8.67□□□□□ -1.02
CCDC66-219ENST00000484441 ZNF507Q8TCN5 953 aa8.67□□□□□ -1.02
CCDC66-219ENST00000484441 TMEM74Q96NL1 305 aa8.67□□□□□ -1.02
CCDC66-219ENST00000484441 FBRSQ9HAH7 460 aa8.67□□□□□ -1.02
CCDC66-219ENST00000484441 SSU72Q9NP77 194 aaKnown RBP8.67□□□□□ -1.02
CCDC66-219ENST00000484441 FAM221AA4D161 298 aa8.66□□□□□ -1.02
CCDC66-219ENST00000484441 CAMK2GQ13555 558 aaPredicted RBP8.66□□□□□ -1.02
CCDC66-219ENST00000484441 SLBPQ14493 270 aaKnown RBP eCLIP8.66□□□□□ -1.02
CCDC66-219ENST00000484441 FAM214BQ7L5A3 538 aa8.66□□□□□ -1.02
CCDC66-219ENST00000484441 KCNQ5Q9NR82 932 aa8.66□□□□□ -1.02
CCDC66-219ENST00000484441 PICK1Q9NRD5 415 aa8.66□□□□□ -1.02
CCDC66-219ENST00000484441 ZC3H7BQ9UGR2 993 aaKnown RBP8.66□□□□□ -1.02
CCDC66-219ENST00000484441 CILPO75339 1184 aa8.65□□□□□ -1.02
CCDC66-219ENST00000484441 LRIG2O94898 1065 aa8.65□□□□□ -1.02
CCDC66-219ENST00000484441 GARTP22102 1010 aa8.65□□□□□ -1.02
CCDC66-219ENST00000484441 NFXL1Q6ZNB6 911 aa8.65□□□□□ -1.02
CCDC66-219ENST00000484441 ARMCX6Q7L4S7 300 aa8.65□□□□□ -1.02
CCDC66-219ENST00000484441 NBPF11Q86T75 865 aa8.65□□□□□ -1.02
CCDC66-219ENST00000484441 TOP6BLQ8N6T0 577 aa8.65□□□□□ -1.02
CCDC66-219ENST00000484441 BCL11AQ9H165 835 aa8.65□□□□□ -1.02
CCDC66-219ENST00000484441 MKNK2Q9HBH9 465 aa8.65□□□□□ -1.02
CCDC66-219ENST00000484441 PRDM10Q9NQV6 1147 aa8.65□□□□□ -1.02
CCDC66-219ENST00000484441 PF4P02776 101 aa8.64□□□□□ -1.03
CCDC66-219ENST00000484441 BNC2Q6ZN30 1099 aaPredicted RBP8.64□□□□□ -1.03
CCDC66-219ENST00000484441 CDC37L1Q7L3B6 337 aa8.64□□□□□ -1.03
CCDC66-219ENST00000484441 RELL1Q8IUW5 271 aa8.64□□□□□ -1.03
CCDC66-219ENST00000484441 GATAD2BQ8WXI9 593 aa8.64□□□□□ -1.03
CCDC66-219ENST00000484441 U3KQE9 123 aa8.64□□□□□ -1.03
CCDC66-219ENST00000484441 F6X3S4 739 aa8.63□□□□□ -1.03
CCDC66-219ENST00000484441 GRK4P32298 578 aa8.63□□□□□ -1.03
CCDC66-219ENST00000484441 NKG7Q16617 165 aa8.63□□□□□ -1.03
CCDC66-219ENST00000484441 VSIG10LQ86VR7 867 aa8.63□□□□□ -1.03
CCDC66-219ENST00000484441 HID1Q8IV36 788 aa8.63□□□□□ -1.03
CCDC66-219ENST00000484441 LRRC4CQ9HCJ2 640 aa8.63□□□□□ -1.03
CCDC66-219ENST00000484441 KBTBD4Q9NVX7 518 aa8.63□□□□□ -1.03
CCDC66-219ENST00000484441 BSDC1Q9NW68 430 aaPredicted RBP8.63□□□□□ -1.03
CCDC66-219ENST00000484441 CCDC39Q9UFE4 941 aa8.63□□□□□ -1.03
CCDC66-219ENST00000484441 EOMESO95936 686 aa8.62□□□□□ -1.03
CCDC66-219ENST00000484441 F13A1P00488 732 aa8.62□□□□□ -1.03
CCDC66-219ENST00000484441 VAMP1P23763 118 aa8.62□□□□□ -1.03
CCDC66-219ENST00000484441 GBP2P32456 591 aaPredicted RBP8.62□□□□□ -1.03
CCDC66-219ENST00000484441 ETF1P62495 437 aaKnown RBP8.62□□□□□ -1.03
CCDC66-219ENST00000484441 HEXIM2Q96MH2 286 aaKnown RBP8.62□□□□□ -1.03
CCDC66-219ENST00000484441 FOXQ1Q9C009 403 aa8.62□□□□□ -1.03
CCDC66-219ENST00000484441 PRR36Q9H6K5 1346 aa8.61□□□□□ -1.03
CCDC66-219ENST00000484441 IGF2BP3O00425 579 aaKnown RBP eCLIP8.61□□□□□ -1.03
CCDC66-219ENST00000484441 WNT11O96014 354 aa8.61□□□□□ -1.03
CCDC66-219ENST00000484441 OXCT1P55809 520 aa8.61□□□□□ -1.03
CCDC66-219ENST00000484441 WFDC3Q8IUB2 231 aa8.61□□□□□ -1.03
CCDC66-219ENST00000484441 MRPL41Q8IXM3 137 aaKnown RBP8.61□□□□□ -1.03
CCDC66-219ENST00000484441 JARID2Q92833 1246 aaPredicted RBP8.61□□□□□ -1.03
CCDC66-219ENST00000484441 COPRSQ9NQ92 184 aa8.61□□□□□ -1.03
CCDC66-219ENST00000484441 ADAM30Q9UKF2 790 aa8.61□□□□□ -1.03
CCDC66-219ENST00000484441 SLITRK5O94991 958 aa8.6□□□□□ -1.03
CCDC66-219ENST00000484441 CST3P01034 146 aaPredicted RBP8.6□□□□□ -1.03
CCDC66-219ENST00000484441 GP2P55259 537 aaKnown RBP8.6□□□□□ -1.03
CCDC66-219ENST00000484441 HS2ST1Q7LGA3 356 aa8.6□□□□□ -1.03
CCDC66-219ENST00000484441 MFSD2AQ8NA29 543 aa8.6□□□□□ -1.03
CCDC66-219ENST00000484441 TJP2Q9UDY2 1190 aa8.6□□□□□ -1.03
CCDC66-219ENST00000484441 CEACAM5P06731 702 aa8.59□□□□□ -1.03
CCDC66-219ENST00000484441 PDE4BQ07343 736 aa8.59□□□□□ -1.03
CCDC66-219ENST00000484441 MPP2Q14168 576 aa8.59□□□□□ -1.03
CCDC66-219ENST00000484441 FAM196AQ6ZSG2 479 aa8.59□□□□□ -1.03
CCDC66-219ENST00000484441 PLD6Q8N2A8 252 aaKnown RBP8.59□□□□□ -1.03
CCDC66-219ENST00000484441 FAM181AQ8N9Y4 354 aa8.59□□□□□ -1.03
CCDC66-219ENST00000484441 NETO1Q8TDF5 533 aa8.59□□□□□ -1.03
CCDC66-219ENST00000484441 LRRC3Q9BY71 257 aa8.59□□□□□ -1.03
CCDC66-219ENST00000484441 TNKS2Q9H2K2 1166 aa8.59□□□□□ -1.03
CCDC66-219ENST00000484441 GTF2IRD1Q9UHL9 959 aa8.59□□□□□ -1.03
CCDC66-219ENST00000484441 GREM1O60565 184 aa8.58□□□□□ -1.04
CCDC66-219ENST00000484441 BPNT1O95861 308 aa8.58□□□□□ -1.04
CCDC66-219ENST00000484441 PGRP06401 933 aa8.58□□□□□ -1.04
CCDC66-219ENST00000484441 FAM160A1Q05DH4 1040 aa8.58□□□□□ -1.04
CCDC66-219ENST00000484441 TMEM201Q5SNT2 666 aa8.58□□□□□ -1.04
CCDC66-219ENST00000484441 PRAMEF13Q5VWM6 474 aa8.58□□□□□ -1.04
CCDC66-219ENST00000484441 DIEXFQ68CQ4 756 aaKnown RBP8.58□□□□□ -1.04
CCDC66-219ENST00000484441 FBXL19Q6PCT2 694 aa8.58□□□□□ -1.04
CCDC66-219ENST00000484441 C22orf34Q6ZV56 151 aa8.58□□□□□ -1.04
CCDC66-219ENST00000484441 GOLM1Q8NBJ4 401 aa8.58□□□□□ -1.04
CCDC66-219ENST00000484441 ACSF2Q96CM8 615 aaPredicted RBP8.58□□□□□ -1.04
CCDC66-219ENST00000484441 MISP3Q96FF7 219 aa8.58□□□□□ -1.04
CCDC66-219ENST00000484441 BACH2Q9BYV9 841 aa8.58□□□□□ -1.04
CCDC66-219ENST00000484441 MAPK8IP1Q9UQF2 711 aa8.58□□□□□ -1.04
CCDC66-219ENST00000484441 OAS3Q9Y6K5 1087 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms