RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 GRAPQ13588 217 aa6.42□□□□□ -1.38
COL17A1-206ENST00000483876 RASGRF1Q13972 1273 aa6.42□□□□□ -1.38
COL17A1-206ENST00000483876 WASHC4Q2M389 1173 aa6.42□□□□□ -1.38
COL17A1-206ENST00000483876 ADCK5Q3MIX3 580 aa6.42□□□□□ -1.38
COL17A1-206ENST00000483876 RBM26Q5T8P6 1007 aaKnown RBP6.42□□□□□ -1.38
COL17A1-206ENST00000483876 DHX32Q7L7V1 743 aaKnown RBP6.42□□□□□ -1.38
COL17A1-206ENST00000483876 SPRYD3Q8NCJ5 442 aa6.42□□□□□ -1.38
COL17A1-206ENST00000483876 GRAPLQ8TC17 118 aaPredicted RBP6.42□□□□□ -1.38
COL17A1-206ENST00000483876 CELF1Q92879 486 aaKnown RBP6.42□□□□□ -1.38
COL17A1-206ENST00000483876 COL26A1Q96A83 441 aa6.42□□□□□ -1.38
COL17A1-206ENST00000483876 RBM17Q96I25 401 aaKnown RBP6.42□□□□□ -1.38
COL17A1-206ENST00000483876 FAM84BQ96KN1 310 aaPredicted RBP6.42□□□□□ -1.38
COL17A1-206ENST00000483876 GBP4Q96PP9 640 aa6.42□□□□□ -1.38
COL17A1-206ENST00000483876 SEC62Q99442 399 aaKnown RBP6.42□□□□□ -1.38
COL17A1-206ENST00000483876 LRFN3Q9BTN0 628 aa6.42□□□□□ -1.38
COL17A1-206ENST00000483876 AGXT2Q9BYV1 514 aa6.42□□□□□ -1.38
COL17A1-206ENST00000483876 UPF3BQ9BZI7 483 aaKnown RBP6.42□□□□□ -1.38
COL17A1-206ENST00000483876 NDUFB9Q9Y6M9 179 aa6.42□□□□□ -1.38
COL17A1-206ENST00000483876 MAST3O60307 1309 aa6.42□□□□□ -1.38
COL17A1-206ENST00000483876 ZMYM6O95789 1325 aa6.42□□□□□ -1.38
COL17A1-206ENST00000483876 WDR19Q8NEZ3 1342 aa6.42□□□□□ -1.38
COL17A1-206ENST00000483876 EYSQ5T1H1 3165 aa6.42□□□□□ -1.38
COL17A1-206ENST00000483876 DDX11L8A8MPP1 907 aa6.41□□□□□ -1.38
COL17A1-206ENST00000483876 PATL2C9JE40 543 aaKnown RBP6.41□□□□□ -1.38
COL17A1-206ENST00000483876 FARP2O94887 1054 aaPredicted RBP6.41□□□□□ -1.38
COL17A1-206ENST00000483876 EGFRP00533 1210 aa6.41□□□□□ -1.38
COL17A1-206ENST00000483876 FGAP02671 866 aa6.41□□□□□ -1.38
COL17A1-206ENST00000483876 PDE6AP16499 860 aa6.41□□□□□ -1.38
COL17A1-206ENST00000483876 HIBADHP31937 336 aaKnown RBP6.41□□□□□ -1.38
COL17A1-206ENST00000483876 GJA8P48165 433 aa6.41□□□□□ -1.38
COL17A1-206ENST00000483876 EVCP57679 992 aa6.41□□□□□ -1.38
COL17A1-206ENST00000483876 INHBEP58166 350 aa6.41□□□□□ -1.38
COL17A1-206ENST00000483876 TTLL12Q14166 644 aaPredicted RBP6.41□□□□□ -1.38
COL17A1-206ENST00000483876 MTFR1Q15390 333 aa6.41□□□□□ -1.38
COL17A1-206ENST00000483876 IMMTQ16891 758 aaKnown RBP6.41□□□□□ -1.38
COL17A1-206ENST00000483876 SKOR2Q2VWA4 1001 aaPredicted RBP6.41□□□□□ -1.38
COL17A1-206ENST00000483876 IFNL1Q8IU54 200 aa6.41□□□□□ -1.38
COL17A1-206ENST00000483876 RGS22Q8NE09 1264 aa6.41□□□□□ -1.38
COL17A1-206ENST00000483876 ADAMTS19Q8TE59 1207 aa6.41□□□□□ -1.38
COL17A1-206ENST00000483876 TNPO1Q92973 898 aaKnown RBP6.41□□□□□ -1.38
COL17A1-206ENST00000483876 STRBPQ96SI9 672 aaKnown RBP6.41□□□□□ -1.38
COL17A1-206ENST00000483876 UHRF1Q96T88 793 aaPredicted RBP6.41□□□□□ -1.38
COL17A1-206ENST00000483876 MTA3Q9BTC8 594 aa6.41□□□□□ -1.38
COL17A1-206ENST00000483876 UBE2OQ9C0C9 1292 aaKnown RBP6.41□□□□□ -1.38
COL17A1-206ENST00000483876 PUS7LQ9H0K6 701 aaKnown RBP6.41□□□□□ -1.38
COL17A1-206ENST00000483876 VPS33BQ9H267 617 aa6.41□□□□□ -1.38
COL17A1-206ENST00000483876 PIH1D3Q9NQM4 214 aaKnown RBP6.41□□□□□ -1.38
COL17A1-206ENST00000483876 GGA3Q9NZ52 723 aa6.41□□□□□ -1.38
COL17A1-206ENST00000483876 ARAP2Q8WZ64 1704 aa6.4□□□□□ -1.38
COL17A1-206ENST00000483876 MANSC4A6NHS7 340 aaPredicted RBP6.4□□□□□ -1.38
COL17A1-206ENST00000483876 GOLGA6L22H0YM25 854 aa6.4□□□□□ -1.38
COL17A1-206ENST00000483876 M0R2C6 588 aa6.4□□□□□ -1.38
COL17A1-206ENST00000483876 ZNF213O14771 459 aa6.4□□□□□ -1.38
COL17A1-206ENST00000483876 GPAA1O43292 621 aa6.4□□□□□ -1.38
COL17A1-206ENST00000483876 IDH1O75874 414 aaKnown RBP6.4□□□□□ -1.38
COL17A1-206ENST00000483876 BRD1O95696 1058 aa6.4□□□□□ -1.38
COL17A1-206ENST00000483876 FOSL2P15408 326 aa6.4□□□□□ -1.38
COL17A1-206ENST00000483876 PDCP20941 246 aa6.4□□□□□ -1.38
COL17A1-206ENST00000483876 ATP2B4P23634 1241 aa6.4□□□□□ -1.38
COL17A1-206ENST00000483876 MAGEA10P43363 369 aaPredicted RBP6.4□□□□□ -1.38
COL17A1-206ENST00000483876 NT5C2P49902 561 aa6.4□□□□□ -1.38
COL17A1-206ENST00000483876 CRHR2Q13324 411 aa6.4□□□□□ -1.38
COL17A1-206ENST00000483876 NBR1Q14596 966 aa6.4□□□□□ -1.38
COL17A1-206ENST00000483876 SPTY2D1Q68D10 685 aaPredicted RBP6.4□□□□□ -1.38
COL17A1-206ENST00000483876 GIMAP6Q6P9H5 292 aa6.4□□□□□ -1.38
COL17A1-206ENST00000483876 CCDC129Q6ZRS4 1044 aa6.4□□□□□ -1.38
COL17A1-206ENST00000483876 VPS37DQ86XT2 251 aa6.4□□□□□ -1.38
COL17A1-206ENST00000483876 MYLIPQ8WY64 445 aa6.4□□□□□ -1.38
COL17A1-206ENST00000483876 DPF2Q92785 391 aa6.4□□□□□ -1.38
COL17A1-206ENST00000483876 RPGRQ92834 1020 aaKnown RBP6.4□□□□□ -1.38
COL17A1-206ENST00000483876 LLPHQ9BRT6 129 aaKnown RBP6.4□□□□□ -1.38
COL17A1-206ENST00000483876 RNF39Q9H2S5 420 aa6.4□□□□□ -1.38
COL17A1-206ENST00000483876 PODXL2Q9NZ53 605 aa6.4□□□□□ -1.38
COL17A1-206ENST00000483876 LRP2BPQ9P2M1 347 aa6.4□□□□□ -1.38
COL17A1-206ENST00000483876 ZMYND8Q9ULU4 1186 aaPredicted RBP6.4□□□□□ -1.38
COL17A1-206ENST00000483876 XDHP47989 1333 aa6.4□□□□□ -1.39
COL17A1-206ENST00000483876 ZNF532Q9HCE3 1301 aa6.4□□□□□ -1.39
COL17A1-206ENST00000483876 SALL1Q9NSC2 1324 aa6.4□□□□□ -1.39
COL17A1-206ENST00000483876 LAMA2P24043 3122 aaKnown RBP6.39□□□□□ -1.39
COL17A1-206ENST00000483876 E7EWF7 191 aa6.39□□□□□ -1.39
COL17A1-206ENST00000483876 IGF2BP3O00425 579 aaKnown RBP eCLIP6.39□□□□□ -1.39
COL17A1-206ENST00000483876 FOXP2O15409 715 aa6.39□□□□□ -1.39
COL17A1-206ENST00000483876 CHGBP05060 677 aa6.39□□□□□ -1.39
COL17A1-206ENST00000483876 GJB1P08034 283 aa6.39□□□□□ -1.39
COL17A1-206ENST00000483876 GYG1P46976 350 aa6.39□□□□□ -1.39
COL17A1-206ENST00000483876 TOB2Q14106 344 aaPredicted RBP6.39□□□□□ -1.39
COL17A1-206ENST00000483876 PI16Q6UXB8 463 aa6.39□□□□□ -1.39
COL17A1-206ENST00000483876 CERS3Q8IU89 383 aa6.39□□□□□ -1.39
COL17A1-206ENST00000483876 SP8Q8IXZ3 490 aa6.39□□□□□ -1.39
COL17A1-206ENST00000483876 ZGPATQ8N5A5 531 aaKnown RBP6.39□□□□□ -1.39
COL17A1-206ENST00000483876 TDRD7Q8NHU6 1098 aaKnown RBP6.39□□□□□ -1.39
COL17A1-206ENST00000483876 NCOA7Q8NI08 942 aa6.39□□□□□ -1.39
COL17A1-206ENST00000483876 WDR66Q8TBY9 1149 aa6.39□□□□□ -1.39
COL17A1-206ENST00000483876 ZNF274Q96GC6 653 aaPredicted RBP6.39□□□□□ -1.39
COL17A1-206ENST00000483876 NACAP1Q9BZK3 213 aa6.39□□□□□ -1.39
COL17A1-206ENST00000483876 TPCN1Q9ULQ1 816 aa6.39□□□□□ -1.39
COL17A1-206ENST00000483876 ZDHHC9Q9Y397 364 aa6.39□□□□□ -1.39
COL17A1-206ENST00000483876 PRUNE2Q8WUY3 3088 aa6.38□□□□□ -1.39
COL17A1-206ENST00000483876 GSG1L2A8MUP6 293 aa6.38□□□□□ -1.39
COL17A1-206ENST00000483876 SNAP23O00161 211 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms