RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 TLR7Q9NYK1 1049 aaKnown RBP24.25■■□□□ 1.47
HPS4-213ENST00000483631 EXOC6BQ9Y2D4 811 aa24.25■■□□□ 1.47
HPS4-213ENST00000483631 RCAN3Q9UKA8 241 aa24.24■■□□□ 1.47
HPS4-213ENST00000483631 METTL16Q86W50 562 aaKnown RBP24.23■■□□□ 1.47
HPS4-213ENST00000483631 RHPN1Q8TCX5 695 aa24.23■■□□□ 1.47
HPS4-213ENST00000483631 ZNF333Q96JL9 665 aa24.23■■□□□ 1.47
HPS4-213ENST00000483631 PIH1D3Q9NQM4 214 aaKnown RBP24.23■■□□□ 1.47
HPS4-213ENST00000483631 PTCH2Q9Y6C5 1203 aa24.23■■□□□ 1.47
HPS4-213ENST00000483631 SIPA1L1O43166 1804 aa24.23■■□□□ 1.47
HPS4-213ENST00000483631 ZSWIM8A7E2V4 1837 aa24.22■■□□□ 1.47
HPS4-213ENST00000483631 BCRP11274 1271 aa24.22■■□□□ 1.47
HPS4-213ENST00000483631 HOXD10P28358 340 aa24.22■■□□□ 1.47
HPS4-213ENST00000483631 CAP2P40123 477 aa24.22■■□□□ 1.47
HPS4-213ENST00000483631 SLC9C1Q4G0N8 1177 aa24.22■■□□□ 1.47
HPS4-213ENST00000483631 ADGRA1Q86SQ6 560 aa24.22■■□□□ 1.47
HPS4-213ENST00000483631 AACSQ86V21 672 aa24.22■■□□□ 1.47
HPS4-213ENST00000483631 KIF1BPQ96EK5 621 aa24.22■■□□□ 1.47
HPS4-213ENST00000483631 GINM1Q9NU53 330 aa24.22■■□□□ 1.47
HPS4-213ENST00000483631 CPA4Q9UI42 421 aa24.22■■□□□ 1.47
HPS4-213ENST00000483631 FLT1P17948 1338 aa24.21■■□□□ 1.47
HPS4-213ENST00000483631 SLURP2P0DP57 97 aa24.21■■□□□ 1.47
HPS4-213ENST00000483631 FOXP4Q8IVH2 680 aaPredicted RBP24.21■■□□□ 1.47
HPS4-213ENST00000483631 PROCA1Q8NCQ7 364 aaPredicted RBP24.21■■□□□ 1.47
HPS4-213ENST00000483631 ARHGAP39Q9C0H5 1083 aa24.21■■□□□ 1.47
HPS4-213ENST00000483631 COG6Q9Y2V7 657 aa24.21■■□□□ 1.47
HPS4-213ENST00000483631 MGAMO43451 1857 aa24.21■■□□□ 1.47
HPS4-213ENST00000483631 CLASRPQ8N2M8 674 aaKnown RBP24.2■■□□□ 1.46
HPS4-213ENST00000483631 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.2■■□□□ 1.46
HPS4-213ENST00000483631 TGFBRAP1Q8WUH2 860 aa24.2■■□□□ 1.46
HPS4-213ENST00000483631 AGTPBP1Q9UPW5 1226 aa24.2■■□□□ 1.46
HPS4-213ENST00000483631 LOC285556D6RIA3 1793 aa24.2■■□□□ 1.46
HPS4-213ENST00000483631 TRIM75PA6NK02 468 aa24.19■■□□□ 1.46
HPS4-213ENST00000483631 RAB11FIP3O75154 756 aa24.19■■□□□ 1.46
HPS4-213ENST00000483631 IDH1O75874 414 aaKnown RBP24.19■■□□□ 1.46
HPS4-213ENST00000483631 CYP7A1P22680 504 aa24.19■■□□□ 1.46
HPS4-213ENST00000483631 PSMC4P43686 418 aa24.19■■□□□ 1.46
HPS4-213ENST00000483631 MAP3K12Q12852 859 aa24.19■■□□□ 1.46
HPS4-213ENST00000483631 PDE3AQ14432 1141 aa24.19■■□□□ 1.46
HPS4-213ENST00000483631 GADL1Q6ZQY3 521 aa24.19■■□□□ 1.46
HPS4-213ENST00000483631 ZNF280CQ8ND82 737 aa24.19■■□□□ 1.46
HPS4-213ENST00000483631 SRRDQ9UH36 339 aa24.19■■□□□ 1.46
HPS4-213ENST00000483631 MYH1P12882 1939 aa24.19■■□□□ 1.46
HPS4-213ENST00000483631 FAM196BA6NMK8 535 aa24.18■■□□□ 1.46
HPS4-213ENST00000483631 CYP2C8P10632 490 aa24.18■■□□□ 1.46
HPS4-213ENST00000483631 TTF1Q15361 905 aaPredicted RBP24.18■■□□□ 1.46
HPS4-213ENST00000483631 TRIM47Q96LD4 638 aa24.18■■□□□ 1.46
HPS4-213ENST00000483631 TMEM106CQ9BVX2 250 aa24.18■■□□□ 1.46
HPS4-213ENST00000483631 AS3MTQ9HBK9 375 aa24.18■■□□□ 1.46
HPS4-213ENST00000483631 PNMA3Q9UL41 463 aa24.18■■□□□ 1.46
HPS4-213ENST00000483631 POTEFA5A3E0 1075 aa24.17■■□□□ 1.46
HPS4-213ENST00000483631 USP17L5A8MUK1 530 aa24.17■■□□□ 1.46
HPS4-213ENST00000483631 ASNSP08243 561 aa24.17■■□□□ 1.46
HPS4-213ENST00000483631 MAPKAPK5Q8IW41 473 aa24.17■■□□□ 1.46
HPS4-213ENST00000483631 SIRT2Q8IXJ6 389 aa24.17■■□□□ 1.46
HPS4-213ENST00000483631 IL1RAPL2Q9NP60 686 aa24.17■■□□□ 1.46
HPS4-213ENST00000483631 CENPFP49454 3210 aa24.17■■□□□ 1.46
HPS4-213ENST00000483631 HLA-DOAP06340 250 aa24.16■■□□□ 1.46
HPS4-213ENST00000483631 CTGFP29279 349 aa24.16■■□□□ 1.46
HPS4-213ENST00000483631 FCGRTP55899 365 aa24.16■■□□□ 1.46
HPS4-213ENST00000483631 SH3D19Q5HYK7 790 aa24.16■■□□□ 1.46
HPS4-213ENST00000483631 PRPF38BQ5VTL8 546 aaKnown RBP24.16■■□□□ 1.46
HPS4-213ENST00000483631 MAGEB6Q8N7X4 407 aa24.16■■□□□ 1.46
HPS4-213ENST00000483631 WDR18Q9BV38 432 aa24.16■■□□□ 1.46
HPS4-213ENST00000483631 FMNL1O95466 1100 aaPredicted RBP24.15■■□□□ 1.46
HPS4-213ENST00000483631 OSBPP22059 807 aa24.15■■□□□ 1.46
HPS4-213ENST00000483631 SPP2Q13103 211 aa24.15■■□□□ 1.46
HPS4-213ENST00000483631 PABPC4Q13310 644 aaKnown RBP eCLIP24.15■■□□□ 1.46
HPS4-213ENST00000483631 RRP1BQ14684 758 aaKnown RBP24.15■■□□□ 1.46
HPS4-213ENST00000483631 SMCR8Q8TEV9 937 aaPredicted RBP24.15■■□□□ 1.46
HPS4-213ENST00000483631 TRIM34Q9BYJ4 488 aa24.15■■□□□ 1.46
HPS4-213ENST00000483631 CCDC84Q86UT8 332 aaPredicted RBP24.14■■□□□ 1.45
HPS4-213ENST00000483631 CRACR2BQ8N4Y2 399 aaPredicted RBP24.14■■□□□ 1.45
HPS4-213ENST00000483631 ANTXR1Q9H6X2 564 aa24.14■■□□□ 1.45
HPS4-213ENST00000483631 DNAJC18Q9H819 358 aa24.14■■□□□ 1.45
HPS4-213ENST00000483631 PCDH10Q9P2E7 1040 aa24.14■■□□□ 1.45
HPS4-213ENST00000483631 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.14■■□□□ 1.45
HPS4-213ENST00000483631 PALD1Q9ULE6 856 aa24.14■■□□□ 1.45
HPS4-213ENST00000483631 MYPNQ86TC9 1320 aa24.13■■□□□ 1.45
HPS4-213ENST00000483631 IFIT2P09913 472 aaKnown RBP24.13■■□□□ 1.45
HPS4-213ENST00000483631 DYNLL1P63167 89 aaKnown RBP24.13■■□□□ 1.45
HPS4-213ENST00000483631 EHD4Q9H223 541 aa24.13■■□□□ 1.45
HPS4-213ENST00000483631 GCLCP48506 637 aaPredicted RBP24.12■■□□□ 1.45
HPS4-213ENST00000483631 RAET1EQ8TD07 263 aa24.12■■□□□ 1.45
HPS4-213ENST00000483631 NDUFB9Q9Y6M9 179 aa24.12■■□□□ 1.45
HPS4-213ENST00000483631 USP5P45974 858 aa24.11■■□□□ 1.45
HPS4-213ENST00000483631 FAM110CQ1W6H9 321 aa24.11■■□□□ 1.45
HPS4-213ENST00000483631 TREML2Q5T2D2 321 aa24.11■■□□□ 1.45
HPS4-213ENST00000483631 MIGA1Q8NAN2 632 aa24.11■■□□□ 1.45
HPS4-213ENST00000483631 DOCK3Q8IZD9 2030 aa24.1■■□□□ 1.45
HPS4-213ENST00000483631 C19orf81C9J6K1 198 aa24.1■■□□□ 1.45
HPS4-213ENST00000483631 GRK4P32298 578 aa24.1■■□□□ 1.45
HPS4-213ENST00000483631 HMGCS2P54868 508 aa24.1■■□□□ 1.45
HPS4-213ENST00000483631 BACE1P56817 501 aa24.1■■□□□ 1.45
HPS4-213ENST00000483631 SLC4A8Q2Y0W8 1093 aa24.1■■□□□ 1.45
HPS4-213ENST00000483631 TTC6Q86TZ1 520 aa24.1■■□□□ 1.45
HPS4-213ENST00000483631 SH3TC2Q8TF17 1288 aa24.1■■□□□ 1.45
HPS4-213ENST00000483631 RIOK1Q9BRS2 568 aaKnown RBP24.1■■□□□ 1.45
HPS4-213ENST00000483631 EN2P19622 333 aaPredicted RBP24.09■■□□□ 1.45
HPS4-213ENST00000483631 TATDN1Q6P1N9 297 aa24.09■■□□□ 1.45
HPS4-213ENST00000483631 SLAIN1Q8ND83 568 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms