RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 KRT24Q2M2I5 525 aa8.83□□□□□ -1
COL4A5-205ENST00000483338 C6orf89Q6UWU4 347 aa8.83□□□□□ -1
COL4A5-205ENST00000483338 CTAGE6Q86UF2 777 aa8.83□□□□□ -1
COL4A5-205ENST00000483338 CTAGE4Q8IX94 777 aa8.83□□□□□ -1
COL4A5-205ENST00000483338 RPAP2Q8IXW5 612 aaPredicted RBP8.83□□□□□ -1
COL4A5-205ENST00000483338 IQCGQ9H095 443 aaKnown RBP8.83□□□□□ -1
COL4A5-205ENST00000483338 HOOK1Q9UJC3 728 aaKnown RBP8.83□□□□□ -1
COL4A5-205ENST00000483338 SALL3Q9BXA9 1300 aa8.83□□□□□ -1
COL4A5-205ENST00000483338 CLTCQ00610 1675 aaKnown RBP8.83□□□□□ -1
COL4A5-205ENST00000483338 GOLGA6L7A0A1B0GV03 622 aa8.83□□□□□ -1
COL4A5-205ENST00000483338 LMOD1P29536 600 aaPredicted RBP8.83□□□□□ -1
COL4A5-205ENST00000483338 SKOR1P84550 965 aa8.83□□□□□ -1
COL4A5-205ENST00000483338 NOD2Q9HC29 1040 aa8.83□□□□□ -1
COL4A5-205ENST00000483338 RIMS2Q9UQ26 1411 aa8.83□□□□□ -1
COL4A5-205ENST00000483338 TET3O43151 1660 aa8.83□□□□□ -1
COL4A5-205ENST00000483338 A0A0U1RQJ8 604 aa8.82□□□□□ -1
COL4A5-205ENST00000483338 ATP6V1G2O95670 118 aa8.82□□□□□ -1
COL4A5-205ENST00000483338 ATP4AP20648 1035 aa8.82□□□□□ -1
COL4A5-205ENST00000483338 CEBPZQ03701 1054 aaKnown RBP8.82□□□□□ -1
COL4A5-205ENST00000483338 BLMHQ13867 455 aa8.82□□□□□ -1
COL4A5-205ENST00000483338 DZIP3Q86Y13 1208 aaKnown RBP8.82□□□□□ -1
COL4A5-205ENST00000483338 CCAR1Q8IX12 1150 aaKnown RBP8.82□□□□□ -1
COL4A5-205ENST00000483338 ZNF473Q8WTR7 871 aaKnown RBP8.82□□□□□ -1
COL4A5-205ENST00000483338 ATRIPQ8WXE1 791 aa8.82□□□□□ -1
COL4A5-205ENST00000483338 RBM33Q96EV2 1170 aaKnown RBP8.82□□□□□ -1
COL4A5-205ENST00000483338 HSD3B7Q9H2F3 369 aa8.82□□□□□ -1
COL4A5-205ENST00000483338 GGNBP2Q9H3C7 697 aa8.82□□□□□ -1
COL4A5-205ENST00000483338 SETD1AO15047 1707 aaKnown RBP8.82□□□□□ -1
COL4A5-205ENST00000483338 LMTK2Q8IWU2 1503 aa8.82□□□□□ -1
COL4A5-205ENST00000483338 ANP32DO95626 131 aa8.82□□□□□ -1
COL4A5-205ENST00000483338 A1BGP04217 495 aa8.82□□□□□ -1
COL4A5-205ENST00000483338 NAT1P18440 290 aa8.82□□□□□ -1
COL4A5-205ENST00000483338 AMPHP49418 695 aa8.82□□□□□ -1
COL4A5-205ENST00000483338 IFFO1Q0D2I5 559 aa8.82□□□□□ -1
COL4A5-205ENST00000483338 MYBPC3Q14896 1274 aa8.82□□□□□ -1
COL4A5-205ENST00000483338 PPP1R15BQ5SWA1 713 aa8.82□□□□□ -1
COL4A5-205ENST00000483338 LARP1Q6PKG0 1096 aaKnown RBP8.82□□□□□ -1
COL4A5-205ENST00000483338 ZFAND2BQ8WV99 257 aa8.82□□□□□ -1
COL4A5-205ENST00000483338 CUL5Q93034 780 aa8.82□□□□□ -1
COL4A5-205ENST00000483338 ACTR5Q9H9F9 607 aaPredicted RBP8.82□□□□□ -1
COL4A5-205ENST00000483338 PIDD1Q9HB75 910 aa8.82□□□□□ -1
COL4A5-205ENST00000483338 LZTFL1Q9NQ48 299 aa8.82□□□□□ -1
COL4A5-205ENST00000483338 SH2B1Q9NRF2 756 aaPredicted RBP8.82□□□□□ -1
COL4A5-205ENST00000483338 NPHP4O75161 1426 aaPredicted RBP8.82□□□□□ -1
COL4A5-205ENST00000483338 MINK1Q8N4C8 1332 aaPredicted RBP8.82□□□□□ -1
COL4A5-205ENST00000483338 NSD3Q9BZ95 1437 aa8.82□□□□□ -1
COL4A5-205ENST00000483338 TMEM232C9JQI7 657 aa8.82□□□□□ -1
COL4A5-205ENST00000483338 LIN7AO14910 233 aaPredicted RBP8.82□□□□□ -1
COL4A5-205ENST00000483338 MAP3K13O43283 966 aa8.82□□□□□ -1
COL4A5-205ENST00000483338 ZNF24P17028 368 aa8.82□□□□□ -1
COL4A5-205ENST00000483338 AKAP17AQ02040 695 aaKnown RBP8.82□□□□□ -1
COL4A5-205ENST00000483338 G3BP1Q13283 466 aaKnown RBP eCLIP8.82□□□□□ -1
COL4A5-205ENST00000483338 SFMBT2Q5VUG0 894 aa8.82□□□□□ -1
COL4A5-205ENST00000483338 BPIFA3Q9BQP9 254 aa8.82□□□□□ -1
COL4A5-205ENST00000483338 FANCLQ9NW38 375 aa8.82□□□□□ -1
COL4A5-205ENST00000483338 ANKIB1Q9P2G1 1089 aa8.82□□□□□ -1
COL4A5-205ENST00000483338 SMIM24O75264 130 aa8.81□□□□□ -1
COL4A5-205ENST00000483338 CTCFP49711 727 aaPredicted RBP8.81□□□□□ -1
COL4A5-205ENST00000483338 HDLBPQ00341 1268 aaKnown RBP8.81□□□□□ -1
COL4A5-205ENST00000483338 MPP3Q13368 585 aa8.81□□□□□ -1
COL4A5-205ENST00000483338 VSTM4Q8IW00 320 aa8.81□□□□□ -1
COL4A5-205ENST00000483338 GSPT2Q8IYD1 628 aaKnown RBP8.81□□□□□ -1
COL4A5-205ENST00000483338 ENGASEQ8NFI3 743 aa8.81□□□□□ -1
COL4A5-205ENST00000483338 OSBPL7Q9BZF2 842 aa8.81□□□□□ -1
COL4A5-205ENST00000483338 ABL2P42684 1182 aa8.81□□□□□ -1
COL4A5-205ENST00000483338 SDCCAG8Q86SQ7 713 aaPredicted RBP8.81□□□□□ -1
COL4A5-205ENST00000483338 SYCP3Q8IZU3 236 aa8.81□□□□□ -1
COL4A5-205ENST00000483338 ZSCAN31Q96LW9 406 aaPredicted RBP8.81□□□□□ -1
COL4A5-205ENST00000483338 MTRQ99707 1265 aa8.81□□□□□ -1
COL4A5-205ENST00000483338 EPN3Q9H201 632 aa8.81□□□□□ -1
COL4A5-205ENST00000483338 C14orf93Q9H972 538 aaKnown RBP8.81□□□□□ -1
COL4A5-205ENST00000483338 POLD4Q9HCU8 107 aa8.81□□□□□ -1
COL4A5-205ENST00000483338 MADDQ8WXG6 1647 aa8.81□□□□□ -1
COL4A5-205ENST00000483338 PTPRMP28827 1452 aa8.81□□□□□ -1
COL4A5-205ENST00000483338 STX10O60499 249 aa8.81□□□□□ -1
COL4A5-205ENST00000483338 GIGYF1O75420 1035 aaPredicted RBP8.81□□□□□ -1
COL4A5-205ENST00000483338 SFSWAPQ12872 951 aaKnown RBP8.81□□□□□ -1
COL4A5-205ENST00000483338 XRCC4Q13426 336 aa8.81□□□□□ -1
COL4A5-205ENST00000483338 CUL3Q13618 768 aa8.81□□□□□ -1
COL4A5-205ENST00000483338 MTF1Q14872 753 aa8.81□□□□□ -1
COL4A5-205ENST00000483338 NUGGCQ68CJ6 796 aa8.81□□□□□ -1
COL4A5-205ENST00000483338 SELENOOQ9BVL4 669 aa8.81□□□□□ -1
COL4A5-205ENST00000483338 UBE2OQ9C0C9 1292 aaKnown RBP8.81□□□□□ -1
COL4A5-205ENST00000483338 GGA2Q9UJY4 613 aa8.81□□□□□ -1
COL4A5-205ENST00000483338 L3MBTL1Q9Y468 752 aa8.81□□□□□ -1
COL4A5-205ENST00000483338 MROH1Q8NDA8 1641 aa8.81□□□□□ -1
COL4A5-205ENST00000483338 KIF24Q5T7B8 1368 aa8.81□□□□□ -1
COL4A5-205ENST00000483338 TOP1P11387 765 aaKnown RBP8.8□□□□□ -1
COL4A5-205ENST00000483338 PDCP20941 246 aa8.8□□□□□ -1
COL4A5-205ENST00000483338 LSP1P33241 339 aa8.8□□□□□ -1
COL4A5-205ENST00000483338 UBASH3AP57075 661 aa8.8□□□□□ -1
COL4A5-205ENST00000483338 CCDC121Q6ZUS5 278 aa8.8□□□□□ -1
COL4A5-205ENST00000483338 CABP2Q9NPB3 220 aa8.8□□□□□ -1
COL4A5-205ENST00000483338 BAIAP2L1Q9UHR4 511 aa8.8□□□□□ -1
COL4A5-205ENST00000483338 TMEM2Q9UHN6 1383 aa8.8□□□□□ -1
COL4A5-205ENST00000483338 NRXN1Q9ULB1 1477 aa8.8□□□□□ -1
COL4A5-205ENST00000483338 EIF4BP23588 611 aaKnown RBP8.8□□□□□ -1
COL4A5-205ENST00000483338 INHBCP55103 352 aa8.8□□□□□ -1
COL4A5-205ENST00000483338 ELF3P78545 371 aaPredicted RBP8.8□□□□□ -1
COL4A5-205ENST00000483338 TUBB2AQ13885 445 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms