RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 VIPAS39Q9H9C1 493 aa13.43□□□□□ -0.26
VTI1A-205ENST00000483122 SH3TC1Q8TE82 1336 aa13.43□□□□□ -0.26
VTI1A-205ENST00000483122 ALS2Q96Q42 1657 aa13.43□□□□□ -0.26
VTI1A-205ENST00000483122 ATP6V1AP38606 617 aa13.43□□□□□ -0.26
VTI1A-205ENST00000483122 SPECC1Q5M775 1068 aa13.43□□□□□ -0.26
VTI1A-205ENST00000483122 CCDC102BQ68D86 513 aa13.43□□□□□ -0.26
VTI1A-205ENST00000483122 DSCC1Q9BVC3 393 aa13.43□□□□□ -0.26
VTI1A-205ENST00000483122 FAM107BQ9H098 131 aa13.43□□□□□ -0.26
VTI1A-205ENST00000483122 SUFUQ9UMX1 484 aa13.43□□□□□ -0.26
VTI1A-205ENST00000483122 HPS5Q9UPZ3 1129 aa13.43□□□□□ -0.26
VTI1A-205ENST00000483122 COL16A1Q07092 1604 aaPredicted RBP13.42□□□□□ -0.26
VTI1A-205ENST00000483122 FAM237AA0A1B0GTK4 181 aa13.42□□□□□ -0.26
VTI1A-205ENST00000483122 BTBD11A6QL63 1104 aa13.42□□□□□ -0.26
VTI1A-205ENST00000483122 SHOX2O60902 331 aaPredicted RBP13.42□□□□□ -0.26
VTI1A-205ENST00000483122 HSPD1P10809 573 aaKnown RBP13.42□□□□□ -0.26
VTI1A-205ENST00000483122 MDM2Q00987 491 aaPredicted RBP13.42□□□□□ -0.26
VTI1A-205ENST00000483122 KBTBD3Q8NAB2 608 aa13.42□□□□□ -0.26
VTI1A-205ENST00000483122 CTCFLQ8NI51 663 aaPredicted RBP13.42□□□□□ -0.26
VTI1A-205ENST00000483122 DDX17Q92841 729 aaKnown RBP13.42□□□□□ -0.26
VTI1A-205ENST00000483122 PIK3C2AO00443 1686 aa13.42□□□□□ -0.26
VTI1A-205ENST00000483122 USP54Q70EL1 1684 aa13.42□□□□□ -0.26
VTI1A-205ENST00000483122 KLF18A0A0U1RQI7 1052 aa13.42□□□□□ -0.26
VTI1A-205ENST00000483122 A0A1B0GTH6 734 aa13.42□□□□□ -0.26
VTI1A-205ENST00000483122 GOLGA8BA8MQT2 603 aa13.42□□□□□ -0.26
VTI1A-205ENST00000483122 PPP6R2O75170 966 aa13.42□□□□□ -0.26
VTI1A-205ENST00000483122 GGCXP38435 758 aa13.42□□□□□ -0.26
VTI1A-205ENST00000483122 ENOX1Q8TC92 643 aaKnown RBP13.42□□□□□ -0.26
VTI1A-205ENST00000483122 KCNH3Q9ULD8 1083 aa13.42□□□□□ -0.26
VTI1A-205ENST00000483122 PALLDQ8WX93 1383 aa13.42□□□□□ -0.26
VTI1A-205ENST00000483122 IGKV5-2P06315 115 aa13.41□□□□□ -0.26
VTI1A-205ENST00000483122 IRAK1P51617 712 aa13.41□□□□□ -0.26
VTI1A-205ENST00000483122 SLC9C2Q5TAH2 1124 aa13.41□□□□□ -0.26
VTI1A-205ENST00000483122 TNS3Q68CZ2 1445 aa13.41□□□□□ -0.26
VTI1A-205ENST00000483122 GOLIM4O00461 696 aa13.41□□□□□ -0.26
VTI1A-205ENST00000483122 EBAG9O00559 213 aa13.41□□□□□ -0.26
VTI1A-205ENST00000483122 TUBBP07437 444 aa13.41□□□□□ -0.26
VTI1A-205ENST00000483122 AMPD2Q01433 879 aa13.41□□□□□ -0.26
VTI1A-205ENST00000483122 PPFIBP1Q86W92 1011 aa13.41□□□□□ -0.26
VTI1A-205ENST00000483122 GSPT2Q8IYD1 628 aaKnown RBP13.41□□□□□ -0.26
VTI1A-205ENST00000483122 GRAMD1CQ8IYS0 662 aa13.41□□□□□ -0.26
VTI1A-205ENST00000483122 MAP3K14Q99558 947 aa13.41□□□□□ -0.26
VTI1A-205ENST00000483122 HOOK1Q9UJC3 728 aaKnown RBP13.41□□□□□ -0.26
VTI1A-205ENST00000483122 MYO6Q9UM54 1294 aa13.41□□□□□ -0.26
VTI1A-205ENST00000483122 AGPSO00116 658 aa13.4□□□□□ -0.26
VTI1A-205ENST00000483122 CPLX1O14810 134 aa13.4□□□□□ -0.26
VTI1A-205ENST00000483122 ARHGAP25P42331 645 aa13.4□□□□□ -0.26
VTI1A-205ENST00000483122 USP14P54578 494 aa13.4□□□□□ -0.26
VTI1A-205ENST00000483122 STIM1Q13586 685 aa13.4□□□□□ -0.26
VTI1A-205ENST00000483122 APTXQ7Z2E3 356 aaKnown RBP13.4□□□□□ -0.26
VTI1A-205ENST00000483122 VPS37DQ86XT2 251 aa13.4□□□□□ -0.26
VTI1A-205ENST00000483122 NUTM2AQ8IVF1 878 aaPredicted RBP13.4□□□□□ -0.26
VTI1A-205ENST00000483122 CCDC148Q8NFR7 591 aa13.4□□□□□ -0.26
VTI1A-205ENST00000483122 NAA15Q9BXJ9 866 aaKnown RBP13.4□□□□□ -0.26
VTI1A-205ENST00000483122 MFAP3LO75121 409 aa13.4□□□□□ -0.26
VTI1A-205ENST00000483122 ZMYND10O75800 440 aa13.4□□□□□ -0.26
VTI1A-205ENST00000483122 CASP14P31944 242 aa13.4□□□□□ -0.26
VTI1A-205ENST00000483122 HAND2P61296 217 aa13.4□□□□□ -0.26
VTI1A-205ENST00000483122 JMYQ8N9B5 988 aa13.4□□□□□ -0.26
VTI1A-205ENST00000483122 ANKRD24Q8TF21 1146 aa13.4□□□□□ -0.26
VTI1A-205ENST00000483122 HELLSQ9NRZ9 838 aa13.4□□□□□ -0.26
VTI1A-205ENST00000483122 MYH8P13535 1937 aa13.39□□□□□ -0.27
VTI1A-205ENST00000483122 SPATA31A3Q5VYP0 1347 aa13.39□□□□□ -0.27
VTI1A-205ENST00000483122 CCDC196A0A1B0GTZ2 297 aa13.39□□□□□ -0.27
VTI1A-205ENST00000483122 INPP5BP32019 993 aa13.39□□□□□ -0.27
VTI1A-205ENST00000483122 RFX5P48382 616 aaPredicted RBP13.39□□□□□ -0.27
VTI1A-205ENST00000483122 PTPN12Q05209 780 aaKnown RBP13.39□□□□□ -0.27
VTI1A-205ENST00000483122 POSTNQ15063 836 aa13.39□□□□□ -0.27
VTI1A-205ENST00000483122 ZMYM1Q5SVZ6 1142 aa13.39□□□□□ -0.27
VTI1A-205ENST00000483122 FAM76AQ8TAV0 307 aa13.39□□□□□ -0.27
VTI1A-205ENST00000483122 COG1Q8WTW3 980 aa13.39□□□□□ -0.27
VTI1A-205ENST00000483122 FAM212AQ96EL1 285 aa13.39□□□□□ -0.27
VTI1A-205ENST00000483122 SEC31BQ9NQW1 1179 aa13.39□□□□□ -0.27
VTI1A-205ENST00000483122 TTF2Q9UNY4 1162 aaKnown RBP13.39□□□□□ -0.27
VTI1A-205ENST00000483122 MAST3O60307 1309 aa13.39□□□□□ -0.27
VTI1A-205ENST00000483122 PRC1O43663 620 aa13.39□□□□□ -0.27
VTI1A-205ENST00000483122 MYBL2P10244 700 aa13.39□□□□□ -0.27
VTI1A-205ENST00000483122 ERVK-24P63145 666 aa13.39□□□□□ -0.27
VTI1A-205ENST00000483122 MORC3Q14149 939 aa13.39□□□□□ -0.27
VTI1A-205ENST00000483122 MPRIPQ6WCQ1 1025 aa13.39□□□□□ -0.27
VTI1A-205ENST00000483122 CNPY4Q8N129 248 aa13.39□□□□□ -0.27
VTI1A-205ENST00000483122 COPRSQ9NQ92 184 aa13.39□□□□□ -0.27
VTI1A-205ENST00000483122 SAMM50Q9Y512 469 aa13.39□□□□□ -0.27
VTI1A-205ENST00000483122 M0R2C6 588 aa13.38□□□□□ -0.27
VTI1A-205ENST00000483122 PBX1P40424 430 aa13.38□□□□□ -0.27
VTI1A-205ENST00000483122 FXR1P51114 621 aaKnown RBP eCLIP13.38□□□□□ -0.27
VTI1A-205ENST00000483122 NLRP6P59044 892 aa13.38□□□□□ -0.27
VTI1A-205ENST00000483122 GRIN1Q05586 938 aa13.38□□□□□ -0.27
VTI1A-205ENST00000483122 MLKLQ8NB16 471 aa13.38□□□□□ -0.27
VTI1A-205ENST00000483122 BCAS4Q8TDM0 211 aa13.38□□□□□ -0.27
VTI1A-205ENST00000483122 LRRC59Q96AG4 307 aaKnown RBP13.38□□□□□ -0.27
VTI1A-205ENST00000483122 ALG1Q9BT22 464 aa13.38□□□□□ -0.27
VTI1A-205ENST00000483122 NBPF3Q9H094 633 aa13.38□□□□□ -0.27
VTI1A-205ENST00000483122 HDAC6Q9UBN7 1215 aa13.38□□□□□ -0.27
VTI1A-205ENST00000483122 SERTAD1Q9UHV2 236 aa13.38□□□□□ -0.27
VTI1A-205ENST00000483122 MARF1Q9Y4F3 1742 aaKnown RBP13.38□□□□□ -0.27
VTI1A-205ENST00000483122 GRIN2DO15399 1336 aa13.38□□□□□ -0.27
VTI1A-205ENST00000483122 TTC39AQ5SRH9 613 aa13.38□□□□□ -0.27
VTI1A-205ENST00000483122 KRT40Q6A162 431 aa13.38□□□□□ -0.27
VTI1A-205ENST00000483122 TTC19Q6DKK2 380 aaPredicted RBP13.38□□□□□ -0.27
VTI1A-205ENST00000483122 FBXL16Q8N461 479 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms