RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 HLA-DOAP06340 250 aa16.83■□□□□ 0.28
VARS-225ENST00000482996 SLURP2P0DP57 97 aa16.83■□□□□ 0.28
VARS-225ENST00000482996 PDE6AP16499 860 aa16.83■□□□□ 0.28
VARS-225ENST00000482996 PTPRAP18433 802 aa16.83■□□□□ 0.28
VARS-225ENST00000482996 ERO1AQ96HE7 468 aa16.83■□□□□ 0.28
VARS-225ENST00000482996 HAUS7Q99871 368 aa16.83■□□□□ 0.28
VARS-225ENST00000482996 PCDHB15Q9Y5E8 787 aa16.83■□□□□ 0.28
VARS-225ENST00000482996 MAGEB6P1A0A0J9YX57 407 aa16.82■□□□□ 0.28
VARS-225ENST00000482996 SP3Q02447 781 aa16.82■□□□□ 0.28
VARS-225ENST00000482996 ANKRD23Q86SG2 305 aa16.82■□□□□ 0.28
VARS-225ENST00000482996 FOXP4Q8IVH2 680 aaPredicted RBP16.82■□□□□ 0.28
VARS-225ENST00000482996 CRACR2BQ8N4Y2 399 aaPredicted RBP16.82■□□□□ 0.28
VARS-225ENST00000482996 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.82■□□□□ 0.283e-7■■■□□ 17.9
VARS-225ENST00000482996 ZNF532Q9HCE3 1301 aa16.81■□□□□ 0.28
VARS-225ENST00000482996 FASTKD5Q7L8L6 764 aaKnown RBP16.81■□□□□ 0.28
VARS-225ENST00000482996 EDC3Q96F86 508 aaKnown RBP16.81■□□□□ 0.28
VARS-225ENST00000482996 ECHDC1Q9NTX5 307 aa16.81■□□□□ 0.28
VARS-225ENST00000482996 SAP30BPQ9UHR5 308 aaKnown RBP16.81■□□□□ 0.28
VARS-225ENST00000482996 PALD1Q9ULE6 856 aa16.81■□□□□ 0.28
VARS-225ENST00000482996 AFG3L2Q9Y4W6 797 aa16.81■□□□□ 0.28
VARS-225ENST00000482996 CAP2P40123 477 aa16.8■□□□□ 0.28
VARS-225ENST00000482996 ARHGEF6Q15052 776 aa16.8■□□□□ 0.28
VARS-225ENST00000482996 RIOK1Q9BRS2 568 aaKnown RBP16.8■□□□□ 0.28
VARS-225ENST00000482996 TBC1D2Q9BYX2 928 aa16.8■□□□□ 0.28
VARS-225ENST00000482996 CRNKL1Q9BZJ0 848 aaKnown RBP16.8■□□□□ 0.28
VARS-225ENST00000482996 ZBTB47Q9UFB7 747 aaPredicted RBP16.8■□□□□ 0.28
VARS-225ENST00000482996 A0A0G2JLL6 359 aaPredicted RBP16.79■□□□□ 0.28
VARS-225ENST00000482996 PDHXO00330 501 aa16.79■□□□□ 0.28
VARS-225ENST00000482996 TLR2O60603 784 aa16.79■□□□□ 0.28
VARS-225ENST00000482996 AAMPQ13685 434 aa16.79■□□□□ 0.28
VARS-225ENST00000482996 ZSCAN25Q6NSZ9 544 aa16.79■□□□□ 0.28
VARS-225ENST00000482996 FBXO46Q6PJ61 603 aaPredicted RBP16.79■□□□□ 0.28
VARS-225ENST00000482996 PRRT2Q7Z6L0 340 aaPredicted RBP16.79■□□□□ 0.28
VARS-225ENST00000482996 METTL16Q86W50 562 aaKnown RBP16.79■□□□□ 0.28
VARS-225ENST00000482996 CD99L2Q8TCZ2 262 aa16.79■□□□□ 0.28
VARS-225ENST00000482996 TRIM17Q9Y577 477 aa16.79■□□□□ 0.28
VARS-225ENST00000482996 DOCK1Q14185 1865 aa16.79■□□□□ 0.28
VARS-225ENST00000482996 TCRBV5S4A2TA0A5A2 114 aa16.78■□□□□ 0.28
VARS-225ENST00000482996 TRIM75PA6NK02 468 aa16.78■□□□□ 0.28
VARS-225ENST00000482996 ADD2P35612 726 aa16.78■□□□□ 0.28
VARS-225ENST00000482996 MOGSQ13724 837 aa16.78■□□□□ 0.28
VARS-225ENST00000482996 GADL1Q6ZQY3 521 aa16.78■□□□□ 0.28
VARS-225ENST00000482996 TTC6Q86TZ1 520 aa16.78■□□□□ 0.28
VARS-225ENST00000482996 PARK7Q99497 189 aaKnown RBP16.78■□□□□ 0.28
VARS-225ENST00000482996 EFCC1Q9HA90 598 aa16.78■□□□□ 0.28
VARS-225ENST00000482996 GINM1Q9NU53 330 aa16.78■□□□□ 0.28
VARS-225ENST00000482996 CDK5RAP2Q96SN8 1893 aa16.78■□□□□ 0.28
VARS-225ENST00000482996 FOCADQ5VW36 1801 aa16.77■□□□□ 0.28
VARS-225ENST00000482996 USP17L5A8MUK1 530 aa16.77■□□□□ 0.28
VARS-225ENST00000482996 ASNSP08243 561 aa16.77■□□□□ 0.28
VARS-225ENST00000482996 KIF22Q14807 665 aa16.77■□□□□ 0.28
VARS-225ENST00000482996 SLC4A8Q2Y0W8 1093 aa16.77■□□□□ 0.28
VARS-225ENST00000482996 OTOP1Q7RTM1 612 aa16.77■□□□□ 0.28
VARS-225ENST00000482996 CCDC84Q86UT8 332 aaPredicted RBP16.77■□□□□ 0.28
VARS-225ENST00000482996 ZNF280CQ8ND82 737 aa16.77■□□□□ 0.28
VARS-225ENST00000482996 AS3MTQ9HBK9 375 aa16.77■□□□□ 0.28
VARS-225ENST00000482996 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.77■□□□□ 0.28
VARS-225ENST00000482996 HPS5Q9UPZ3 1129 aa16.77■□□□□ 0.28
VARS-225ENST00000482996 POLR3DP05423 398 aaPredicted RBP16.76■□□□□ 0.27
VARS-225ENST00000482996 SPP2Q13103 211 aa16.76■□□□□ 0.27
VARS-225ENST00000482996 RRP1BQ14684 758 aaKnown RBP16.76■□□□□ 0.27
VARS-225ENST00000482996 UBE3CQ15386 1083 aa16.76■□□□□ 0.27
VARS-225ENST00000482996 GPAT2Q6NUI2 795 aa16.76■□□□□ 0.27
VARS-225ENST00000482996 EHD4Q9H223 541 aa16.76■□□□□ 0.27
VARS-225ENST00000482996 DNAJC18Q9H819 358 aa16.76■□□□□ 0.27
VARS-225ENST00000482996 SERPINB13Q9UIV8 391 aa16.76■□□□□ 0.27
VARS-225ENST00000482996 TTC41PQ6P2S7 1318 aa16.75■□□□□ 0.27
VARS-225ENST00000482996 ERC2O15083 957 aa16.75■□□□□ 0.27
VARS-225ENST00000482996 MBD4O95243 580 aa16.75■□□□□ 0.27
VARS-225ENST00000482996 LCORLQ8N3X6 602 aa16.75■□□□□ 0.27
VARS-225ENST00000482996 ARMT1Q9H993 441 aa16.75■□□□□ 0.27
VARS-225ENST00000482996 MCM9Q9NXL9 1143 aa16.75■□□□□ 0.27
VARS-225ENST00000482996 SLC45A1Q9Y2W3 748 aa16.75■□□□□ 0.27
VARS-225ENST00000482996 MYH1P12882 1939 aa16.74■□□□□ 0.27
VARS-225ENST00000482996 GDF11O95390 407 aa16.74■□□□□ 0.27
VARS-225ENST00000482996 HDAC1Q13547 482 aaPredicted RBP16.74■□□□□ 0.27
VARS-225ENST00000482996 TSHZ3Q63HK5 1081 aa16.74■□□□□ 0.27
VARS-225ENST00000482996 C17orf99Q6UX52 265 aa16.74■□□□□ 0.27
VARS-225ENST00000482996 PROCA1Q8NCQ7 364 aaPredicted RBP16.74■□□□□ 0.27
VARS-225ENST00000482996 GCC1Q96CN9 775 aa16.74■□□□□ 0.27
VARS-225ENST00000482996 WDR18Q9BV38 432 aa16.74■□□□□ 0.27
VARS-225ENST00000482996 CPA4Q9UI42 421 aa16.74■□□□□ 0.27
VARS-225ENST00000482996 AGTPBP1Q9UPW5 1226 aa16.74■□□□□ 0.27
VARS-225ENST00000482996 SIPA1L1O43166 1804 aa16.74■□□□□ 0.27
VARS-225ENST00000482996 LACTBP83111 547 aaPredicted RBP16.73■□□□□ 0.27
VARS-225ENST00000482996 PABPC4Q13310 644 aaKnown RBP eCLIP16.73■□□□□ 0.27
VARS-225ENST00000482996 LRRFIP1Q32MZ4 808 aaKnown RBP16.73■□□□□ 0.27
VARS-225ENST00000482996 ANKRD45Q5TZF3 282 aa16.73■□□□□ 0.27
VARS-225ENST00000482996 KBTBD3Q8NAB2 608 aa16.73■□□□□ 0.27
VARS-225ENST00000482996 SDR42E1Q8WUS8 393 aa16.73■□□□□ 0.27
VARS-225ENST00000482996 DDRGK1Q96HY6 314 aa16.73■□□□□ 0.27
VARS-225ENST00000482996 DCP1AQ9NPI6 582 aaPredicted RBP16.73■□□□□ 0.27
VARS-225ENST00000482996 ATP8A2Q9NTI2 1148 aa16.73■□□□□ 0.27
VARS-225ENST00000482996 PNMA3Q9UL41 463 aa16.73■□□□□ 0.27
VARS-225ENST00000482996 ZBTB21Q9ULJ3 1066 aa16.73■□□□□ 0.27
VARS-225ENST00000482996 PTPN22Q9Y2R2 807 aa16.73■□□□□ 0.27
VARS-225ENST00000482996 PHIPQ8WWQ0 1821 aa16.73■□□□□ 0.27
VARS-225ENST00000482996 ADGRA2Q96PE1 1338 aa16.72■□□□□ 0.27
VARS-225ENST00000482996 GLRX3O76003 335 aaKnown RBP16.72■□□□□ 0.27
VARS-225ENST00000482996 CYP2C8P10632 490 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms