RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 NKX2-3Q8TAU0 364 aa17.79■□□□□ 0.44
PHGDH-205ENST00000482968 PDE4BQ07343 736 aa17.78■□□□□ 0.44
PHGDH-205ENST00000482968 SH3BP5LQ7L8J4 393 aa17.78■□□□□ 0.44
PHGDH-205ENST00000482968 IPO9Q96P70 1041 aaKnown RBP17.78■□□□□ 0.44
PHGDH-205ENST00000482968 KRT23Q9C075 422 aa17.78■□□□□ 0.44
PHGDH-205ENST00000482968 DHX36Q9H2U1 1008 aaKnown RBP17.78■□□□□ 0.44
PHGDH-205ENST00000482968 CNNM2Q9H8M5 875 aa17.78■□□□□ 0.44
PHGDH-205ENST00000482968 ADARB2Q9NS39 739 aaKnown RBP17.78■□□□□ 0.44
PHGDH-205ENST00000482968 HACL1Q9UJ83 578 aa17.78■□□□□ 0.44
PHGDH-205ENST00000482968 KDM4AO75164 1064 aa17.77■□□□□ 0.44
PHGDH-205ENST00000482968 HLA-DOAP06340 250 aa17.77■□□□□ 0.44
PHGDH-205ENST00000482968 FKBP1CQ5VVH2 108 aa17.77■□□□□ 0.44
PHGDH-205ENST00000482968 MB21D2Q8IYB1 491 aaPredicted RBP17.77■□□□□ 0.44
PHGDH-205ENST00000482968 SLC44A5Q8NCS7 719 aa17.77■□□□□ 0.44
PHGDH-205ENST00000482968 FAM151AQ8WW52 585 aa17.77■□□□□ 0.44
PHGDH-205ENST00000482968 L3MBTL3Q96JM7 780 aaPredicted RBP17.77■□□□□ 0.44
PHGDH-205ENST00000482968 LRRC2Q9BYS8 371 aa17.77■□□□□ 0.44
PHGDH-205ENST00000482968 MKNK2Q9HBH9 465 aa17.77■□□□□ 0.44
PHGDH-205ENST00000482968 ZSWIM5Q9P217 1185 aa17.77■□□□□ 0.44
PHGDH-205ENST00000482968 DDX60LQ5H9U9 1706 aaKnown RBP17.77■□□□□ 0.44
PHGDH-205ENST00000482968 CNTNAP1P78357 1384 aa17.76■□□□□ 0.43
PHGDH-205ENST00000482968 FGRP09769 529 aa17.76■□□□□ 0.43
PHGDH-205ENST00000482968 MCM5P33992 734 aa17.76■□□□□ 0.43
PHGDH-205ENST00000482968 EXOSC10Q01780 885 aaKnown RBP17.76■□□□□ 0.43
PHGDH-205ENST00000482968 TTC14Q96N46 770 aa17.76■□□□□ 0.43
PHGDH-205ENST00000482968 LARP6Q9BRS8 491 aaKnown RBP17.76■□□□□ 0.43
PHGDH-205ENST00000482968 RANBP6O60518 1105 aaKnown RBP17.76■□□□□ 0.43
PHGDH-205ENST00000482968 PCP11498 1178 aaKnown RBP17.76■□□□□ 0.43
PHGDH-205ENST00000482968 TNNI2P48788 182 aa17.76■□□□□ 0.43
PHGDH-205ENST00000482968 CDK8P49336 464 aa17.76■□□□□ 0.43
PHGDH-205ENST00000482968 AK2P54819 239 aa17.76■□□□□ 0.43
PHGDH-205ENST00000482968 ANGEL2Q5VTE6 544 aaKnown RBP17.76■□□□□ 0.43
PHGDH-205ENST00000482968 NOL8Q76FK4 1167 aaKnown RBP17.76■□□□□ 0.43
PHGDH-205ENST00000482968 CYB5R4Q7L1T6 521 aa17.76■□□□□ 0.43
PHGDH-205ENST00000482968 FAM83AQ86UY5 434 aa17.76■□□□□ 0.43
PHGDH-205ENST00000482968 TMEM39BQ9GZU3 492 aa17.76■□□□□ 0.43
PHGDH-205ENST00000482968 PI4KBQ9UBF8 816 aa17.76■□□□□ 0.43
PHGDH-205ENST00000482968 SERPINB13Q9UIV8 391 aa17.76■□□□□ 0.43
PHGDH-205ENST00000482968 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.76■□□□□ 0.43
PHGDH-205ENST00000482968 ROBO3Q96MS0 1386 aa17.75■□□□□ 0.43
PHGDH-205ENST00000482968 PRC1O43663 620 aa17.75■□□□□ 0.43
PHGDH-205ENST00000482968 SLURP2P0DP57 97 aa17.75■□□□□ 0.43
PHGDH-205ENST00000482968 FGD1P98174 961 aa17.75■□□□□ 0.43
PHGDH-205ENST00000482968 RASA3Q14644 834 aa17.75■□□□□ 0.43
PHGDH-205ENST00000482968 Q6ZUG5 572 aa17.75■□□□□ 0.43
PHGDH-205ENST00000482968 C16orf86Q6ZW13 317 aa17.75■□□□□ 0.43
PHGDH-205ENST00000482968 ESR2Q92731 530 aa17.75■□□□□ 0.43
PHGDH-205ENST00000482968 SNX21Q969T3 373 aa17.75■□□□□ 0.43
PHGDH-205ENST00000482968 CSRNP1Q96S65 589 aa17.75■□□□□ 0.43
PHGDH-205ENST00000482968 TBC1D2Q9BYX2 928 aa17.75■□□□□ 0.43
PHGDH-205ENST00000482968 ORC4O43929 436 aa17.74■□□□□ 0.43
PHGDH-205ENST00000482968 ANTXR2P58335 489 aa17.74■□□□□ 0.43
PHGDH-205ENST00000482968 TNFAIP1Q13829 316 aa17.74■□□□□ 0.43
PHGDH-205ENST00000482968 ZNF444Q8N0Y2 327 aaPredicted RBP17.74■□□□□ 0.43
PHGDH-205ENST00000482968 CRACR2BQ8N4Y2 399 aaPredicted RBP17.74■□□□□ 0.43
PHGDH-205ENST00000482968 ZNF287Q9HBT7 754 aa17.74■□□□□ 0.43
PHGDH-205ENST00000482968 EPHX2P34913 555 aa17.74■□□□□ 0.43
PHGDH-205ENST00000482968 GABPAQ06546 454 aa17.74■□□□□ 0.43
PHGDH-205ENST00000482968 FAM47AQ5JRC9 791 aa17.74■□□□□ 0.43
PHGDH-205ENST00000482968 FOXP4Q8IVH2 680 aaPredicted RBP17.74■□□□□ 0.43
PHGDH-205ENST00000482968 HSCBQ8IWL3 235 aa17.74■□□□□ 0.43
PHGDH-205ENST00000482968 IL27Q8NEV9 243 aa17.74■□□□□ 0.43
PHGDH-205ENST00000482968 ZKSCAN3Q9BRR0 538 aa17.74■□□□□ 0.43
PHGDH-205ENST00000482968 GGA3Q9NZ52 723 aa17.74■□□□□ 0.43
PHGDH-205ENST00000482968 ATRNL1Q5VV63 1379 aa17.73■□□□□ 0.43
PHGDH-205ENST00000482968 POLR2AP24928 1970 aaKnown RBP17.73■□□□□ 0.43
PHGDH-205ENST00000482968 FAM196BA6NMK8 535 aa17.73■□□□□ 0.43
PHGDH-205ENST00000482968 POTECB2RU33 542 aa17.73■□□□□ 0.43
PHGDH-205ENST00000482968 BECN1Q14457 450 aa17.73■□□□□ 0.43
PHGDH-205ENST00000482968 CDAN1Q8IWY9 1227 aa17.73■□□□□ 0.43
PHGDH-205ENST00000482968 DEFB129Q9H1M3 183 aa17.73■□□□□ 0.43
PHGDH-205ENST00000482968 EHD4Q9H223 541 aa17.73■□□□□ 0.43
PHGDH-205ENST00000482968 IQCA1LA6NCM1 817 aa17.72■□□□□ 0.43
PHGDH-205ENST00000482968 TSPY2A6NKD2 308 aa17.72■□□□□ 0.43
PHGDH-205ENST00000482968 SLC4A3P48751 1232 aa17.72■□□□□ 0.43
PHGDH-205ENST00000482968 TFAP4Q01664 338 aa17.72■□□□□ 0.43
PHGDH-205ENST00000482968 TOB2Q14106 344 aaPredicted RBP17.72■□□□□ 0.43
PHGDH-205ENST00000482968 TRIM34Q9BYJ4 488 aa17.72■□□□□ 0.43
PHGDH-205ENST00000482968 ALDH8A1Q9H2A2 487 aaPredicted RBP17.72■□□□□ 0.43
PHGDH-205ENST00000482968 GPHNQ9NQX3 736 aaPredicted RBP17.72■□□□□ 0.43
PHGDH-205ENST00000482968 RASA1P20936 1047 aa17.71■□□□□ 0.43
PHGDH-205ENST00000482968 USP50Q70EL3 339 aaPredicted RBP17.71■□□□□ 0.43
PHGDH-205ENST00000482968 APOBEC3FQ8IUX4 373 aaKnown RBP17.71■□□□□ 0.43
PHGDH-205ENST00000482968 TAF1DQ9H5J8 278 aaPredicted RBP17.71■□□□□ 0.43
PHGDH-205ENST00000482968 SWAP70Q9UH65 585 aa17.71■□□□□ 0.43
PHGDH-205ENST00000482968 COL2A1P02458 1487 aaPredicted RBP17.71■□□□□ 0.43
PHGDH-205ENST00000482968 IFIT3O14879 490 aaKnown RBP17.71■□□□□ 0.43
PHGDH-205ENST00000482968 MCM2P49736 904 aa17.71■□□□□ 0.43
PHGDH-205ENST00000482968 ANKRD1Q15327 319 aa17.71■□□□□ 0.43
PHGDH-205ENST00000482968 EAPPQ56P03 285 aaPredicted RBP17.71■□□□□ 0.43
PHGDH-205ENST00000482968 BRF1Q92994 677 aa17.71■□□□□ 0.43
PHGDH-205ENST00000482968 DNAJC18Q9H819 358 aa17.71■□□□□ 0.43
PHGDH-205ENST00000482968 PGAP2Q9UHJ9 254 aa17.71■□□□□ 0.43
PHGDH-205ENST00000482968 WDR19Q8NEZ3 1342 aa17.7■□□□□ 0.42
PHGDH-205ENST00000482968 SIPA1L1O43166 1804 aa17.7■□□□□ 0.42
PHGDH-205ENST00000482968 SCN4AP35499 1836 aa17.7■□□□□ 0.42
PHGDH-205ENST00000482968 K7ELQ4 463 aaPredicted RBP17.7■□□□□ 0.42
PHGDH-205ENST00000482968 TSPY3P0CV98 308 aa17.7■□□□□ 0.42
PHGDH-205ENST00000482968 TSPY8P0CW00 308 aa17.7■□□□□ 0.42
PHGDH-205ENST00000482968 SHMT1P34896 483 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms