RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 ADGRA1Q86SQ6 560 aa17.51■□□□□ 0.39
DDR1-244ENST00000482873 HSD3B7Q9H2F3 369 aa17.51■□□□□ 0.39
DDR1-244ENST00000482873 LY9Q9HBG7 655 aa17.51■□□□□ 0.39
DDR1-244ENST00000482873 JAG2Q9Y219 1238 aa17.51■□□□□ 0.39
DDR1-244ENST00000482873 TULP2O00295 520 aa17.51■□□□□ 0.39
DDR1-244ENST00000482873 SEC31AO94979 1220 aaKnown RBP17.51■□□□□ 0.39
DDR1-244ENST00000482873 IARSP41252 1262 aaKnown RBP17.51■□□□□ 0.39
DDR1-244ENST00000482873 EIF5P55010 431 aaKnown RBP17.51■□□□□ 0.39
DDR1-244ENST00000482873 FANCCQ00597 558 aa17.51■□□□□ 0.39
DDR1-244ENST00000482873 TMCO3Q6UWJ1 677 aa17.51■□□□□ 0.39
DDR1-244ENST00000482873 C3orf67Q6ZVT6 689 aa17.51■□□□□ 0.39
DDR1-244ENST00000482873 FAM217BQ9NTX9 383 aaPredicted RBP17.51■□□□□ 0.39
DDR1-244ENST00000482873 CCDC87Q9NVE4 849 aa17.51■□□□□ 0.39
DDR1-244ENST00000482873 CYP2D7A0A087X1C5 515 aa17.5■□□□□ 0.39
DDR1-244ENST00000482873 GSG1L2A8MUP6 293 aa17.5■□□□□ 0.39
DDR1-244ENST00000482873 ZMYM6O95789 1325 aa17.5■□□□□ 0.39
DDR1-244ENST00000482873 NLRP12P59046 1061 aa17.5■□□□□ 0.39
DDR1-244ENST00000482873 PIP4K2BP78356 416 aa17.5■□□□□ 0.39
DDR1-244ENST00000482873 PHLPP2Q6ZVD8 1323 aa17.5■□□□□ 0.39
DDR1-244ENST00000482873 TRERF1Q96PN7 1200 aa17.5■□□□□ 0.39
DDR1-244ENST00000482873 EPC1Q9H2F5 836 aa17.5■□□□□ 0.39
DDR1-244ENST00000482873 SLC12A7Q9Y666 1083 aa17.5■□□□□ 0.39
DDR1-244ENST00000482873 LOC102724428A0A0B4J2F2 783 aa17.5■□□□□ 0.39
DDR1-244ENST00000482873 PATL2C9JE40 543 aaKnown RBP17.5■□□□□ 0.39
DDR1-244ENST00000482873 POLR3GO15318 223 aaPredicted RBP17.5■□□□□ 0.39
DDR1-244ENST00000482873 NRDCO43847 1150 aa17.5■□□□□ 0.39
DDR1-244ENST00000482873 TUBB4AP04350 444 aa17.5■□□□□ 0.39
DDR1-244ENST00000482873 UQCRFS1P1P0C7P4 283 aa17.5■□□□□ 0.39
DDR1-244ENST00000482873 SIK1P57059 783 aa17.5■□□□□ 0.39
DDR1-244ENST00000482873 AXDND1Q5T1B0 1012 aaPredicted RBP17.5■□□□□ 0.39
DDR1-244ENST00000482873 RGS22Q8NE09 1264 aa17.5■□□□□ 0.39
DDR1-244ENST00000482873 AKAP11Q9UKA4 1901 aa17.5■□□□□ 0.39
DDR1-244ENST00000482873 PRDM1O75626 825 aa17.49■□□□□ 0.39
DDR1-244ENST00000482873 URI1O94763 535 aaPredicted RBP17.49■□□□□ 0.39
DDR1-244ENST00000482873 EVX2Q03828 476 aa17.49■□□□□ 0.39
DDR1-244ENST00000482873 CHRNDQ07001 517 aa17.49■□□□□ 0.39
DDR1-244ENST00000482873 FBXL16Q8N461 479 aa17.49■□□□□ 0.39
DDR1-244ENST00000482873 MARCH10Q8NA82 808 aaPredicted RBP17.49■□□□□ 0.39
DDR1-244ENST00000482873 KCNG4Q8TDN1 519 aa17.49■□□□□ 0.39
DDR1-244ENST00000482873 DPF2Q92785 391 aa17.49■□□□□ 0.39
DDR1-244ENST00000482873 POLR3EQ9NVU0 708 aa17.49■□□□□ 0.39
DDR1-244ENST00000482873 BTBD18B2RXH4 712 aa17.49■□□□□ 0.39
DDR1-244ENST00000482873 TADA3O75528 432 aa17.49■□□□□ 0.39
DDR1-244ENST00000482873 GOLGA8FQ08AF8 430 aa17.49■□□□□ 0.39
DDR1-244ENST00000482873 GOLGA8DPQ0D2H9 430 aa17.49■□□□□ 0.39
DDR1-244ENST00000482873 CARD6Q9BX69 1037 aa17.49■□□□□ 0.39
DDR1-244ENST00000482873 ARGLU1Q9NWB6 273 aaPredicted RBP17.49■□□□□ 0.39
DDR1-244ENST00000482873 MROH5Q6ZUA9 1318 aa17.48■□□□□ 0.39
DDR1-244ENST00000482873 ERVV-1B6SEH8 477 aa17.48■□□□□ 0.39
DDR1-244ENST00000482873 IGHMBP2P38935 993 aaKnown RBP17.48■□□□□ 0.39
DDR1-244ENST00000482873 PNOCQ13519 176 aa17.48■□□□□ 0.39
DDR1-244ENST00000482873 MFSD6Q6ZSS7 791 aa17.48■□□□□ 0.39
DDR1-244ENST00000482873 MNS1Q8NEH6 495 aa17.48■□□□□ 0.39
DDR1-244ENST00000482873 ITGB4P16144 1822 aa17.48■□□□□ 0.39
DDR1-244ENST00000482873 TPM4P67936 248 aa17.48■□□□□ 0.39
DDR1-244ENST00000482873 GRIN1Q05586 938 aa17.48■□□□□ 0.39
DDR1-244ENST00000482873 NTRK3Q16288 839 aa17.48■□□□□ 0.39
DDR1-244ENST00000482873 REXO1L1PQ8IX06 675 aa17.48■□□□□ 0.39
DDR1-244ENST00000482873 RAI14Q9P0K7 980 aa17.48■□□□□ 0.39
DDR1-244ENST00000482873 PARP3Q9Y6F1 533 aa17.48■□□□□ 0.39
DDR1-244ENST00000482873 FOXN1O15353 648 aa17.47■□□□□ 0.39
DDR1-244ENST00000482873 SASH3O75995 380 aa17.47■□□□□ 0.39
DDR1-244ENST00000482873 CAMTA2O94983 1202 aa17.47■□□□□ 0.39
DDR1-244ENST00000482873 CYP7A1P22680 504 aa17.47■□□□□ 0.39
DDR1-244ENST00000482873 IRX3P78415 501 aaPredicted RBP17.47■□□□□ 0.39
DDR1-244ENST00000482873 SHC4Q6S5L8 630 aa17.47■□□□□ 0.39
DDR1-244ENST00000482873 BRAPQ7Z569 592 aa17.47■□□□□ 0.39
DDR1-244ENST00000482873 NEK11Q8NG66 645 aa17.47■□□□□ 0.39
DDR1-244ENST00000482873 ABCA3Q99758 1704 aa17.47■□□□□ 0.39
DDR1-244ENST00000482873 NR5A1Q13285 461 aa17.47■□□□□ 0.39
DDR1-244ENST00000482873 PTF1AQ7RTS3 328 aa17.47■□□□□ 0.39
DDR1-244ENST00000482873 TMX1Q9H3N1 280 aa17.47■□□□□ 0.39
DDR1-244ENST00000482873 ZCCHC17Q9NP64 241 aaKnown RBP17.47■□□□□ 0.39
DDR1-244ENST00000482873 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.47■□□□□ 0.39
DDR1-244ENST00000482873 YEATS4O95619 227 aa17.46■□□□□ 0.39
DDR1-244ENST00000482873 SYKP43405 635 aa17.46■□□□□ 0.39
DDR1-244ENST00000482873 AKNAD1Q5T1N1 836 aa17.46■□□□□ 0.39
DDR1-244ENST00000482873 SLC51AQ86UW1 340 aa17.46■□□□□ 0.39
DDR1-244ENST00000482873 FAM177A1Q8N128 213 aaPredicted RBP17.46■□□□□ 0.39
DDR1-244ENST00000482873 EFCAB8A8MWE9 144 aa17.46■□□□□ 0.39
DDR1-244ENST00000482873 IKBKBO14920 756 aa17.46■□□□□ 0.39
DDR1-244ENST00000482873 UBASH3AP57075 661 aa17.46■□□□□ 0.39
DDR1-244ENST00000482873 DYNLL1P63167 89 aaKnown RBP17.46■□□□□ 0.39
DDR1-244ENST00000482873 ST5P78524 1137 aa17.46■□□□□ 0.39
DDR1-244ENST00000482873 TRIM29Q14134 588 aa17.46■□□□□ 0.39
DDR1-244ENST00000482873 SLC39A14Q15043 492 aa17.46■□□□□ 0.39
DDR1-244ENST00000482873 CCDC152Q4G0S7 254 aa17.46■□□□□ 0.39
DDR1-244ENST00000482873 FAM182BQ5T319 152 aa17.46■□□□□ 0.39
DDR1-244ENST00000482873 CPLX2Q6PUV4 134 aaKnown RBP17.46■□□□□ 0.39
DDR1-244ENST00000482873 ZNF512BQ96KM6 892 aaPredicted RBP17.46■□□□□ 0.39
DDR1-244ENST00000482873 CCP110O43303 1012 aa17.45■□□□□ 0.38
DDR1-244ENST00000482873 DHX8Q14562 1220 aaKnown RBP17.45■□□□□ 0.38
DDR1-244ENST00000482873 ERFEQ4G0M1 354 aa17.45■□□□□ 0.38
DDR1-244ENST00000482873 DHX37Q8IY37 1157 aaKnown RBP17.45■□□□□ 0.38
DDR1-244ENST00000482873 PDILTQ8N807 584 aa17.45■□□□□ 0.38
DDR1-244ENST00000482873 SRRTQ9BXP5 876 aaKnown RBP17.45■□□□□ 0.38
DDR1-244ENST00000482873 TBC1D8O95759 1140 aa17.45■□□□□ 0.38
DDR1-244ENST00000482873 SSRP1Q08945 709 aaKnown RBP17.45■□□□□ 0.38
DDR1-244ENST00000482873 UBXN6Q9BZV1 441 aa17.45■□□□□ 0.38
DDR1-244ENST00000482873 DISP2A7MBM2 1401 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms