RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 CRACR2BQ8N4Y2 399 aaPredicted RBP15.79■□□□□ 0.12
HDAC1-208ENST00000482310 DYNLL2Q96FJ2 89 aa15.79■□□□□ 0.12
HDAC1-208ENST00000482310 TRIM34Q9BYJ4 488 aa15.79■□□□□ 0.12
HDAC1-208ENST00000482310 MKRN1Q9UHC7 482 aaKnown RBP15.79■□□□□ 0.12
HDAC1-208ENST00000482310 PPP2R3BQ9Y5P8 575 aa15.79■□□□□ 0.12
HDAC1-208ENST00000482310 COL2A1P02458 1487 aaPredicted RBP15.78■□□□□ 0.12
HDAC1-208ENST00000482310 ITGBL1O95965 494 aaPredicted RBP15.78■□□□□ 0.12
HDAC1-208ENST00000482310 FGAP02671 866 aa15.78■□□□□ 0.12
HDAC1-208ENST00000482310 NF2P35240 595 aa15.78■□□□□ 0.12
HDAC1-208ENST00000482310 CTDSPL2Q05D32 466 aa15.78■□□□□ 0.12
HDAC1-208ENST00000482310 MOB2Q70IA6 237 aa15.78■□□□□ 0.12
HDAC1-208ENST00000482310 ARPP21Q9UBL0 812 aaPredicted RBP15.78■□□□□ 0.12
HDAC1-208ENST00000482310 MYH4Q9Y623 1939 aa15.78■□□□□ 0.12
HDAC1-208ENST00000482310 ATRNL1Q5VV63 1379 aa15.77■□□□□ 0.12
HDAC1-208ENST00000482310 NPM3O75607 178 aaKnown RBP15.77■□□□□ 0.12
HDAC1-208ENST00000482310 C8orf34Q49A92 452 aa15.77■□□□□ 0.12
HDAC1-208ENST00000482310 TNS4Q8IZW8 715 aa15.77■□□□□ 0.12
HDAC1-208ENST00000482310 SLC44A5Q8NCS7 719 aa15.77■□□□□ 0.12
HDAC1-208ENST00000482310 DSCC1Q9BVC3 393 aa15.77■□□□□ 0.12
HDAC1-208ENST00000482310 LSG1Q9H089 658 aaKnown RBP15.77■□□□□ 0.12
HDAC1-208ENST00000482310 DHX36Q9H2U1 1008 aaKnown RBP15.77■□□□□ 0.12
HDAC1-208ENST00000482310 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.77■□□□□ 0.12
HDAC1-208ENST00000482310 PPARAQ07869 468 aa15.76■□□□□ 0.11
HDAC1-208ENST00000482310 SUPT20HL1Q3ZLR7 823 aa15.76■□□□□ 0.11
HDAC1-208ENST00000482310 C12orf60Q5U649 245 aa15.76■□□□□ 0.11
HDAC1-208ENST00000482310 GIMAP6Q6P9H5 292 aa15.76■□□□□ 0.11
HDAC1-208ENST00000482310 TTC6Q86TZ1 520 aa15.76■□□□□ 0.11
HDAC1-208ENST00000482310 PI4KBQ9UBF8 816 aa15.76■□□□□ 0.11
HDAC1-208ENST00000482310 ANGEL1Q9UNK9 670 aaKnown RBP15.76■□□□□ 0.11
HDAC1-208ENST00000482310 RBM8AQ9Y5S9 174 aaKnown RBP15.76■□□□□ 0.11
HDAC1-208ENST00000482310 SEC24BO95487 1268 aa15.75■□□□□ 0.11
HDAC1-208ENST00000482310 INCENPQ9NQS7 918 aa15.75■□□□□ 0.11
HDAC1-208ENST00000482310 TOMM22Q9NS69 142 aa15.75■□□□□ 0.11
HDAC1-208ENST00000482310 PHIPQ8WWQ0 1821 aa15.75■□□□□ 0.11
HDAC1-208ENST00000482310 PASKQ96RG2 1323 aa15.74■□□□□ 0.11
HDAC1-208ENST00000482310 PRDM1O75626 825 aa15.74■□□□□ 0.11
HDAC1-208ENST00000482310 REC8O95072 547 aa15.74■□□□□ 0.11
HDAC1-208ENST00000482310 GDF11O95390 407 aa15.74■□□□□ 0.11
HDAC1-208ENST00000482310 ALX1Q15699 326 aa15.74■□□□□ 0.11
HDAC1-208ENST00000482310 IMMTQ16891 758 aaKnown RBP15.74■□□□□ 0.11
HDAC1-208ENST00000482310 RRP12Q5JTH9 1297 aaKnown RBP15.74■□□□□ 0.11
HDAC1-208ENST00000482310 DCAF15Q66K64 600 aa15.74■□□□□ 0.11
HDAC1-208ENST00000482310 PIAS4Q8N2W9 510 aaPredicted RBP15.74■□□□□ 0.11
HDAC1-208ENST00000482310 DNAJC18Q9H819 358 aa15.74■□□□□ 0.11
HDAC1-208ENST00000482310 GBA2Q9HCG7 927 aaPredicted RBP15.74■□□□□ 0.11
HDAC1-208ENST00000482310 SERPINB13Q9UIV8 391 aa15.74■□□□□ 0.11
HDAC1-208ENST00000482310 U3KPZ7 1027 aaPredicted RBP15.74■□□□□ 0.11
HDAC1-208ENST00000482310 UBE2Q2LH0YL09 131 aa15.73■□□□□ 0.11
HDAC1-208ENST00000482310 ZNF213O14771 459 aa15.73■□□□□ 0.11
HDAC1-208ENST00000482310 PPP1R12BO60237 982 aaPredicted RBP15.73■□□□□ 0.11
HDAC1-208ENST00000482310 SHROOM1Q2M3G4 852 aaPredicted RBP15.73■□□□□ 0.11
HDAC1-208ENST00000482310 SBK1Q52WX2 424 aa15.73■□□□□ 0.11
HDAC1-208ENST00000482310 CST9Q5W186 159 aa15.73■□□□□ 0.11
HDAC1-208ENST00000482310 TBC1D10CQ8IV04 446 aa15.73■□□□□ 0.11
HDAC1-208ENST00000482310 MAP4K1Q92918 833 aa15.73■□□□□ 0.11
HDAC1-208ENST00000482310 HOOK2Q96ED9 719 aa15.73■□□□□ 0.11
HDAC1-208ENST00000482310 WRNIP1Q96S55 665 aa15.73■□□□□ 0.11
HDAC1-208ENST00000482310 ZNF341Q9BYN7 854 aa15.73■□□□□ 0.11
HDAC1-208ENST00000482310 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.73■□□□□ 0.11
HDAC1-208ENST00000482310 CTNNA3Q9UI47 895 aa15.73■□□□□ 0.11
HDAC1-208ENST00000482310 ZMYM6O95789 1325 aa15.72■□□□□ 0.11
HDAC1-208ENST00000482310 USP2O75604 605 aaPredicted RBP15.72■□□□□ 0.11
HDAC1-208ENST00000482310 CDK8P49336 464 aa15.72■□□□□ 0.11
HDAC1-208ENST00000482310 C2orf69Q8N8R5 385 aa15.72■□□□□ 0.11
HDAC1-208ENST00000482310 ZKSCAN4Q969J2 545 aaPredicted RBP15.72■□□□□ 0.11
HDAC1-208ENST00000482310 NBPF3Q9H094 633 aa15.72■□□□□ 0.11
HDAC1-208ENST00000482310 TAF6LQ9Y6J9 622 aa15.72■□□□□ 0.11
HDAC1-208ENST00000482310 GREB1LQ9C091 1923 aaPredicted RBP15.72■□□□□ 0.11
HDAC1-208ENST00000482310 NEDD4P46934 1319 aa15.71■□□□□ 0.11
HDAC1-208ENST00000482310 PTPRFP10586 1907 aa15.71■□□□□ 0.11
HDAC1-208ENST00000482310 MPHOSPH10O00566 681 aaKnown RBP15.71■□□□□ 0.11
HDAC1-208ENST00000482310 SLC3A2P08195 630 aaKnown RBP15.71■□□□□ 0.11
HDAC1-208ENST00000482310 INPP5BP32019 993 aa15.71■□□□□ 0.11
HDAC1-208ENST00000482310 SHMT1P34896 483 aa15.71■□□□□ 0.11
HDAC1-208ENST00000482310 IREB2P48200 963 aaKnown RBP15.71■□□□□ 0.11
HDAC1-208ENST00000482310 RRP1BQ14684 758 aaKnown RBP15.71■□□□□ 0.11
HDAC1-208ENST00000482310 CREB3L3Q68CJ9 461 aa15.71■□□□□ 0.11
HDAC1-208ENST00000482310 C16orf86Q6ZW13 317 aa15.71■□□□□ 0.11
HDAC1-208ENST00000482310 ARMC9Q7Z3E5 817 aa15.71■□□□□ 0.11
HDAC1-208ENST00000482310 EHD4Q9H223 541 aa15.71■□□□□ 0.11
HDAC1-208ENST00000482310 MKNK2Q9HBH9 465 aa15.71■□□□□ 0.11
HDAC1-208ENST00000482310 CREBZFQ9NS37 354 aa15.71■□□□□ 0.11
HDAC1-208ENST00000482310 HERC5Q9UII4 1024 aaKnown RBP15.71■□□□□ 0.11
HDAC1-208ENST00000482310 ABT1Q9ULW3 272 aaKnown RBP15.71■□□□□ 0.11
HDAC1-208ENST00000482310 TACC3Q9Y6A5 838 aa15.71■□□□□ 0.11
HDAC1-208ENST00000482310 ROBO3Q96MS0 1386 aa15.71■□□□□ 0.11
HDAC1-208ENST00000482310 SLC27A2O14975 620 aa15.7■□□□□ 0.1
HDAC1-208ENST00000482310 CYP21A2P08686 494 aa15.7■□□□□ 0.1
HDAC1-208ENST00000482310 PDE4BQ07343 736 aa15.7■□□□□ 0.1
HDAC1-208ENST00000482310 PAXIP1Q6ZW49 1069 aaPredicted RBP15.7■□□□□ 0.1
HDAC1-208ENST00000482310 CCDC84Q86UT8 332 aaPredicted RBP15.7■□□□□ 0.1
HDAC1-208ENST00000482310 FOXP4Q8IVH2 680 aaPredicted RBP15.7■□□□□ 0.1
HDAC1-208ENST00000482310 CLMNQ96JQ2 1002 aa15.7■□□□□ 0.1
HDAC1-208ENST00000482310 TMEM88BA6NKF7 163 aa15.69■□□□□ 0.1
HDAC1-208ENST00000482310 RANBP6O60518 1105 aaKnown RBP15.69■□□□□ 0.1
HDAC1-208ENST00000482310 HUNKP57058 714 aa15.69■□□□□ 0.1
HDAC1-208ENST00000482310 GABPAQ06546 454 aa15.69■□□□□ 0.1
HDAC1-208ENST00000482310 GRM1Q13255 1194 aa15.69■□□□□ 0.1
HDAC1-208ENST00000482310 CERKLQ49MI3 558 aaPredicted RBP15.69■□□□□ 0.1
HDAC1-208ENST00000482310 FAM47AQ5JRC9 791 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms