RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 NDUFB9Q9Y6M9 179 aa16.45■□□□□ 0.22
CTDSP1-208ENST00000482272 ADGRA2Q96PE1 1338 aa16.45■□□□□ 0.22
CTDSP1-208ENST00000482272 RBBP6Q7Z6E9 1792 aaKnown RBP16.44■□□□□ 0.22
CTDSP1-208ENST00000482272 FMNL1O95466 1100 aaPredicted RBP16.44■□□□□ 0.22
CTDSP1-208ENST00000482272 CTGFP29279 349 aa16.44■□□□□ 0.22
CTDSP1-208ENST00000482272 ZAP70P43403 619 aa16.44■□□□□ 0.22
CTDSP1-208ENST00000482272 PSMC4P43686 418 aa16.44■□□□□ 0.22
CTDSP1-208ENST00000482272 PPP4CP60510 307 aa16.44■□□□□ 0.22
CTDSP1-208ENST00000482272 RRP1BQ14684 758 aaKnown RBP16.44■□□□□ 0.22
CTDSP1-208ENST00000482272 HSP90AB4PQ58FF6 505 aa16.44■□□□□ 0.22
CTDSP1-208ENST00000482272 GADL1Q6ZQY3 521 aa16.44■□□□□ 0.22
CTDSP1-208ENST00000482272 SIRT2Q8IXJ6 389 aa16.44■□□□□ 0.22
CTDSP1-208ENST00000482272 SH3RF3Q8TEJ3 882 aaPredicted RBP16.44■□□□□ 0.22
CTDSP1-208ENST00000482272 ZNF333Q96JL9 665 aa16.44■□□□□ 0.22
CTDSP1-208ENST00000482272 PI4KBQ9UBF8 816 aa16.44■□□□□ 0.22
CTDSP1-208ENST00000482272 SLC45A1Q9Y2W3 748 aa16.44■□□□□ 0.22
CTDSP1-208ENST00000482272 TRIM75PA6NK02 468 aa16.43■□□□□ 0.22
CTDSP1-208ENST00000482272 ECM2O94769 699 aaPredicted RBP16.43■□□□□ 0.22
CTDSP1-208ENST00000482272 CYP2C8P10632 490 aa16.43■□□□□ 0.22
CTDSP1-208ENST00000482272 SLC4A8Q2Y0W8 1093 aa16.43■□□□□ 0.22
CTDSP1-208ENST00000482272 C20orf194Q5TEA3 1177 aa16.43■□□□□ 0.22
CTDSP1-208ENST00000482272 TBC1D2Q9BYX2 928 aa16.43■□□□□ 0.22
CTDSP1-208ENST00000482272 HERC5Q9UII4 1024 aaKnown RBP16.43■□□□□ 0.22
CTDSP1-208ENST00000482272 COL2A1P02458 1487 aaPredicted RBP16.42■□□□□ 0.22
CTDSP1-208ENST00000482272 PRPF38BQ5VTL8 546 aaKnown RBP16.42■□□□□ 0.22
CTDSP1-208ENST00000482272 FOXP4Q8IVH2 680 aaPredicted RBP16.42■□□□□ 0.22
CTDSP1-208ENST00000482272 RPAP2Q8IXW5 612 aaPredicted RBP16.42■□□□□ 0.22
CTDSP1-208ENST00000482272 TGFBRAP1Q8WUH2 860 aa16.42■□□□□ 0.22
CTDSP1-208ENST00000482272 CHMP4BQ9H444 224 aaKnown RBP16.42■□□□□ 0.22
CTDSP1-208ENST00000482272 SRRDQ9UH36 339 aa16.42■□□□□ 0.22
CTDSP1-208ENST00000482272 COG6Q9Y2V7 657 aa16.42■□□□□ 0.22
CTDSP1-208ENST00000482272 LOC285556D6RIA3 1793 aa16.41■□□□□ 0.22
CTDSP1-208ENST00000482272 BCRP11274 1271 aa16.41■□□□□ 0.22
CTDSP1-208ENST00000482272 CAP2P40123 477 aa16.41■□□□□ 0.22
CTDSP1-208ENST00000482272 FCGRTP55899 365 aa16.41■□□□□ 0.22
CTDSP1-208ENST00000482272 RAET1EQ8TD07 263 aa16.41■□□□□ 0.22
CTDSP1-208ENST00000482272 TRIM34Q9BYJ4 488 aa16.41■□□□□ 0.22
CTDSP1-208ENST00000482272 ANTXR1Q9H6X2 564 aa16.41■□□□□ 0.22
CTDSP1-208ENST00000482272 AS3MTQ9HBK9 375 aa16.41■□□□□ 0.22
CTDSP1-208ENST00000482272 DDX19BQ9UMR2 479 aa16.41■□□□□ 0.22
CTDSP1-208ENST00000482272 DDX60LQ5H9U9 1706 aaKnown RBP16.41■□□□□ 0.22
CTDSP1-208ENST00000482272 MGAMO43451 1857 aa16.4■□□□□ 0.22
CTDSP1-208ENST00000482272 USP17L5A8MUK1 530 aa16.4■□□□□ 0.22
CTDSP1-208ENST00000482272 IDH1O75874 414 aaKnown RBP16.4■□□□□ 0.22
CTDSP1-208ENST00000482272 EN2P19622 333 aaPredicted RBP16.4■□□□□ 0.22
CTDSP1-208ENST00000482272 OSBPP22059 807 aa16.4■□□□□ 0.22
CTDSP1-208ENST00000482272 CYP7A1P22680 504 aa16.4■□□□□ 0.22
CTDSP1-208ENST00000482272 SPP2Q13103 211 aa16.4■□□□□ 0.22
CTDSP1-208ENST00000482272 SHROOM1Q2M3G4 852 aaPredicted RBP16.4■□□□□ 0.22
CTDSP1-208ENST00000482272 TMED8Q6PL24 325 aaPredicted RBP16.4■□□□□ 0.22
CTDSP1-208ENST00000482272 AACSQ86V21 672 aa16.4■□□□□ 0.22
CTDSP1-208ENST00000482272 CERS3Q8IU89 383 aa16.4■□□□□ 0.22
CTDSP1-208ENST00000482272 MAPKAPK5Q8IW41 473 aa16.4■□□□□ 0.22
CTDSP1-208ENST00000482272 ZNF280CQ8ND82 737 aa16.4■□□□□ 0.22
CTDSP1-208ENST00000482272 SMCR8Q8TEV9 937 aaPredicted RBP16.4■□□□□ 0.22
CTDSP1-208ENST00000482272 SH3TC2Q8TF17 1288 aa16.4■□□□□ 0.22
CTDSP1-208ENST00000482272 TRIM47Q96LD4 638 aa16.4■□□□□ 0.22
CTDSP1-208ENST00000482272 ZBTB40Q9NUA8 1239 aa16.4■□□□□ 0.22
CTDSP1-208ENST00000482272 PNMA3Q9UL41 463 aa16.4■□□□□ 0.22
CTDSP1-208ENST00000482272 AGTPBP1Q9UPW5 1226 aa16.4■□□□□ 0.22
CTDSP1-208ENST00000482272 HMMRO75330 724 aa16.39■□□□□ 0.21
CTDSP1-208ENST00000482272 DYNLL1P63167 89 aaKnown RBP16.39■□□□□ 0.21
CTDSP1-208ENST00000482272 JAG1P78504 1218 aa16.39■□□□□ 0.21
CTDSP1-208ENST00000482272 MAP3K12Q12852 859 aa16.39■□□□□ 0.21
CTDSP1-208ENST00000482272 PABPC4Q13310 644 aaKnown RBP eCLIP16.39■□□□□ 0.21
CTDSP1-208ENST00000482272 CRACR2BQ8N4Y2 399 aaPredicted RBP16.39■□□□□ 0.21
CTDSP1-208ENST00000482272 PROCA1Q8NCQ7 364 aaPredicted RBP16.39■□□□□ 0.21
CTDSP1-208ENST00000482272 RHPN1Q8TCX5 695 aa16.39■□□□□ 0.21
CTDSP1-208ENST00000482272 DNAJC18Q9H819 358 aa16.39■□□□□ 0.21
CTDSP1-208ENST00000482272 IL1RAPL2Q9NP60 686 aa16.39■□□□□ 0.21
CTDSP1-208ENST00000482272 MYPNQ86TC9 1320 aa16.39■□□□□ 0.21
CTDSP1-208ENST00000482272 MYCP01106 439 aaPredicted RBP16.38■□□□□ 0.21
CTDSP1-208ENST00000482272 HLA-DOAP06340 250 aa16.38■□□□□ 0.21
CTDSP1-208ENST00000482272 GRK4P32298 578 aa16.38■□□□□ 0.21
CTDSP1-208ENST00000482272 CLASRPQ8N2M8 674 aaKnown RBP16.38■□□□□ 0.21
CTDSP1-208ENST00000482272 RCAN3Q9UKA8 241 aa16.38■□□□□ 0.21
CTDSP1-208ENST00000482272 PALD1Q9ULE6 856 aa16.38■□□□□ 0.21
CTDSP1-208ENST00000482272 FLT1P17948 1338 aa16.38■□□□□ 0.21
CTDSP1-208ENST00000482272 MKI67P46013 3256 aaKnown RBP16.37■□□□□ 0.21
CTDSP1-208ENST00000482272 MYH1P12882 1939 aa16.37■□□□□ 0.21
CTDSP1-208ENST00000482272 ASNSP08243 561 aa16.37■□□□□ 0.21
CTDSP1-208ENST00000482272 USP5P45974 858 aa16.37■□□□□ 0.21
CTDSP1-208ENST00000482272 TTF1Q15361 905 aaPredicted RBP16.37■□□□□ 0.21
CTDSP1-208ENST00000482272 METTL16Q86W50 562 aaKnown RBP16.37■□□□□ 0.21
CTDSP1-208ENST00000482272 MAGEB6Q8N7X4 407 aa16.37■□□□□ 0.21
CTDSP1-208ENST00000482272 KIF1BPQ96EK5 621 aa16.37■□□□□ 0.21
CTDSP1-208ENST00000482272 GINM1Q9NU53 330 aa16.37■□□□□ 0.21
CTDSP1-208ENST00000482272 HMGCS2P54868 508 aa16.36■□□□□ 0.21
CTDSP1-208ENST00000482272 SH3D19Q5HYK7 790 aa16.36■□□□□ 0.21
CTDSP1-208ENST00000482272 TREML2Q5T2D2 321 aa16.36■□□□□ 0.21
CTDSP1-208ENST00000482272 WDR18Q9BV38 432 aa16.36■□□□□ 0.21
CTDSP1-208ENST00000482272 BIN2Q9UBW5 565 aaPredicted RBP16.36■□□□□ 0.21
CTDSP1-208ENST00000482272 C19orf81C9J6K1 198 aa16.35■□□□□ 0.21
CTDSP1-208ENST00000482272 APBB1O00213 710 aa16.35■□□□□ 0.21
CTDSP1-208ENST00000482272 TNPO2O14787 897 aaKnown RBP16.35■□□□□ 0.21
CTDSP1-208ENST00000482272 IFIT2P09913 472 aaKnown RBP16.35■□□□□ 0.21
CTDSP1-208ENST00000482272 GCLCP48506 637 aaPredicted RBP16.35■□□□□ 0.21
CTDSP1-208ENST00000482272 UBXN2AP68543 259 aa16.35■□□□□ 0.21
CTDSP1-208ENST00000482272 PRKCZQ05513 592 aa16.35■□□□□ 0.21
CTDSP1-208ENST00000482272 ANKRD13CQ8N6S4 541 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms