RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 E4F1Q66K89 784 aaPredicted RBP17.64■□□□□ 0.41
C9orf3-218ENST00000482056 METTL16Q86W50 562 aaKnown RBP17.64■□□□□ 0.41
C9orf3-218ENST00000482056 UBAC1Q9BSL1 405 aa17.64■□□□□ 0.41
C9orf3-218ENST00000482056 CCDC87Q9NVE4 849 aa17.64■□□□□ 0.41
C9orf3-218ENST00000482056 KANK3Q6NY19 840 aa17.64■□□□□ 0.41
C9orf3-218ENST00000482056 LCORLQ8N3X6 602 aa17.64■□□□□ 0.41
C9orf3-218ENST00000482056 CCDC34Q96HJ3 373 aa17.64■□□□□ 0.41
C9orf3-218ENST00000482056 OGFRQ9NZT2 677 aa17.64■□□□□ 0.41
C9orf3-218ENST00000482056 BTBD18B2RXH4 712 aa17.63■□□□□ 0.41
C9orf3-218ENST00000482056 ATP1A3P13637 1013 aa17.63■□□□□ 0.41
C9orf3-218ENST00000482056 XBP1P17861 261 aa17.63■□□□□ 0.41
C9orf3-218ENST00000482056 CRACR2BQ8N4Y2 399 aaPredicted RBP17.63■□□□□ 0.41
C9orf3-218ENST00000482056 ZNF579Q8NAF0 562 aaKnown RBP17.63■□□□□ 0.41
C9orf3-218ENST00000482056 ZNF215Q9UL58 517 aaPredicted RBP17.63■□□□□ 0.41
C9orf3-218ENST00000482056 PCDHA5Q9Y5H7 936 aa17.63■□□□□ 0.41
C9orf3-218ENST00000482056 DOT1LQ8TEK3 1739 aa17.63■□□□□ 0.41
C9orf3-218ENST00000482056 LAMB2P55268 1798 aa17.63■□□□□ 0.41
C9orf3-218ENST00000482056 WNK3Q9BYP7 1800 aa17.63■□□□□ 0.41
C9orf3-218ENST00000482056 PRKAB2O43741 272 aa17.62■□□□□ 0.41
C9orf3-218ENST00000482056 TOP1P11387 765 aaKnown RBP17.62■□□□□ 0.41
C9orf3-218ENST00000482056 PTPREP23469 700 aa17.62■□□□□ 0.41
C9orf3-218ENST00000482056 BCAMP50895 628 aa17.62■□□□□ 0.41
C9orf3-218ENST00000482056 AKAP17AQ02040 695 aaKnown RBP17.62■□□□□ 0.41
C9orf3-218ENST00000482056 VSTM4Q8IW00 320 aa17.62■□□□□ 0.41
C9orf3-218ENST00000482056 ZNF397Q8NF99 534 aaPredicted RBP17.62■□□□□ 0.41
C9orf3-218ENST00000482056 SEC31BQ9NQW1 1179 aa17.62■□□□□ 0.41
C9orf3-218ENST00000482056 GNL3LQ9NVN8 582 aaKnown RBP17.62■□□□□ 0.41
C9orf3-218ENST00000482056 PHLPP1O60346 1717 aa17.62■□□□□ 0.41
C9orf3-218ENST00000482056 PPARAQ07869 468 aa17.62■□□□□ 0.41
C9orf3-218ENST00000482056 POSTNQ15063 836 aa17.62■□□□□ 0.41
C9orf3-218ENST00000482056 ZNF654Q8IZM8 581 aa17.62■□□□□ 0.41
C9orf3-218ENST00000482056 STK11IPQ8N1F8 1099 aa17.62■□□□□ 0.41
C9orf3-218ENST00000482056 MLKLQ8NB16 471 aa17.62■□□□□ 0.41
C9orf3-218ENST00000482056 FANCBQ8NB91 859 aa17.62■□□□□ 0.41
C9orf3-218ENST00000482056 ESR2Q92731 530 aa17.62■□□□□ 0.41
C9orf3-218ENST00000482056 CDC5LQ99459 802 aaKnown RBP17.62■□□□□ 0.41
C9orf3-218ENST00000482056 CDCA7Q9BWT1 371 aaPredicted RBP17.62■□□□□ 0.41
C9orf3-218ENST00000482056 HSD3B7Q9H2F3 369 aa17.62■□□□□ 0.41
C9orf3-218ENST00000482056 SLIT2O94813 1529 aa17.61■□□□□ 0.41
C9orf3-218ENST00000482056 CYP7A1P22680 504 aa17.61■□□□□ 0.41
C9orf3-218ENST00000482056 FCHSD1Q86WN1 690 aa17.61■□□□□ 0.41
C9orf3-218ENST00000482056 HOMER1Q86YM7 354 aa17.61■□□□□ 0.41
C9orf3-218ENST00000482056 TRIML1Q8N9V2 468 aa17.61■□□□□ 0.41
C9orf3-218ENST00000482056 NUP133Q8WUM0 1156 aa17.61■□□□□ 0.41
C9orf3-218ENST00000482056 SMARCE1Q969G3 411 aa17.61■□□□□ 0.41
C9orf3-218ENST00000482056 ZKSCAN3Q9BRR0 538 aa17.61■□□□□ 0.41
C9orf3-218ENST00000482056 FBXO2Q9UK22 296 aaPredicted RBP17.61■□□□□ 0.41
C9orf3-218ENST00000482056 KCNJ14Q9UNX9 436 aa17.61■□□□□ 0.41
C9orf3-218ENST00000482056 TACC3Q9Y6A5 838 aa17.61■□□□□ 0.41
C9orf3-218ENST00000482056 MYH6P13533 1939 aa17.61■□□□□ 0.41
C9orf3-218ENST00000482056 SPDYE4A6NLX3 237 aa17.6■□□□□ 0.41
C9orf3-218ENST00000482056 GUCY1A2P33402 732 aa17.6■□□□□ 0.41
C9orf3-218ENST00000482056 UTP14CQ5TAP6 766 aaKnown RBP17.6■□□□□ 0.41
C9orf3-218ENST00000482056 GTPBP4Q9BZE4 634 aaKnown RBP17.6■□□□□ 0.41
C9orf3-218ENST00000482056 MAGEB6P1A0A0J9YX57 407 aa17.6■□□□□ 0.41
C9orf3-218ENST00000482056 TOB1P50616 345 aaPredicted RBP17.6■□□□□ 0.41
C9orf3-218ENST00000482056 MDM2Q00987 491 aaPredicted RBP17.6■□□□□ 0.41
C9orf3-218ENST00000482056 INTS5Q6P9B9 1019 aaKnown RBP17.6■□□□□ 0.41
C9orf3-218ENST00000482056 MIGA1Q8NAN2 632 aa17.6■□□□□ 0.41
C9orf3-218ENST00000482056 RNF26Q9BY78 433 aaPredicted RBP17.6■□□□□ 0.41
C9orf3-218ENST00000482056 FANCLQ9NW38 375 aa17.6■□□□□ 0.41
C9orf3-218ENST00000482056 ANAPC4Q9UJX5 808 aa17.6■□□□□ 0.41
C9orf3-218ENST00000482056 SRPRBQ9Y5M8 271 aaKnown RBP17.6■□□□□ 0.41
C9orf3-218ENST00000482056 UBE2Q2LH0YL09 131 aa17.59■□□□□ 0.41
C9orf3-218ENST00000482056 SNAP23O00161 211 aa17.59■□□□□ 0.41
C9orf3-218ENST00000482056 ZSCAN12O43309 604 aa17.59■□□□□ 0.41
C9orf3-218ENST00000482056 CRKLP46109 303 aaKnown RBP17.59■□□□□ 0.41
C9orf3-218ENST00000482056 CHRNDQ07001 517 aa17.59■□□□□ 0.41
C9orf3-218ENST00000482056 SYT10Q6XYQ8 523 aa17.59■□□□□ 0.41
C9orf3-218ENST00000482056 L2HGDHQ9H9P8 463 aa17.59■□□□□ 0.41
C9orf3-218ENST00000482056 PRDM10Q9NQV6 1147 aa17.59■□□□□ 0.41
C9orf3-218ENST00000482056 MAN1B1Q9UKM7 699 aa17.59■□□□□ 0.41
C9orf3-218ENST00000482056 MORC2Q9Y6X9 1032 aaPredicted RBP17.59■□□□□ 0.41
C9orf3-218ENST00000482056 PHLPP2Q6ZVD8 1323 aa17.59■□□□□ 0.41
C9orf3-218ENST00000482056 POLR2DO15514 142 aaKnown RBP17.59■□□□□ 0.41
C9orf3-218ENST00000482056 CAMTA2O94983 1202 aa17.59■□□□□ 0.41
C9orf3-218ENST00000482056 ATP6V1AP38606 617 aa17.59■□□□□ 0.41
C9orf3-218ENST00000482056 DMTNQ08495 405 aa17.59■□□□□ 0.41
C9orf3-218ENST00000482056 NAA30Q147X3 362 aaPredicted RBP17.59■□□□□ 0.41
C9orf3-218ENST00000482056 NT5DC1Q5TFE4 455 aa17.59■□□□□ 0.41
C9orf3-218ENST00000482056 NIP7Q9Y221 180 aaKnown RBP eCLIP17.59■□□□□ 0.41
C9orf3-218ENST00000482056 ZNF652Q9Y2D9 606 aa17.59■□□□□ 0.41
C9orf3-218ENST00000482056 BMP15O95972 392 aa17.58■□□□□ 0.4
C9orf3-218ENST00000482056 CDK11BP21127 795 aaKnown RBP17.58■□□□□ 0.4
C9orf3-218ENST00000482056 FOXP4Q8IVH2 680 aaPredicted RBP17.58■□□□□ 0.4
C9orf3-218ENST00000482056 CCDC82Q8N4S0 544 aa17.58■□□□□ 0.4
C9orf3-218ENST00000482056 DPF2Q92785 391 aa17.58■□□□□ 0.4
C9orf3-218ENST00000482056 TMX1Q9H3N1 280 aa17.58■□□□□ 0.4
C9orf3-218ENST00000482056 RAI14Q9P0K7 980 aa17.58■□□□□ 0.4
C9orf3-218ENST00000482056 SERTAD1Q9UHV2 236 aa17.58■□□□□ 0.4
C9orf3-218ENST00000482056 TNKSO95271 1327 aa17.57■□□□□ 0.4
C9orf3-218ENST00000482056 RREB1Q92766 1687 aa17.57■□□□□ 0.4
C9orf3-218ENST00000482056 MINDY4BA8MYZ0 360 aa17.57■□□□□ 0.4
C9orf3-218ENST00000482056 NTSR2O95665 410 aa17.57■□□□□ 0.4
C9orf3-218ENST00000482056 ETF1P62495 437 aaKnown RBP17.57■□□□□ 0.4
C9orf3-218ENST00000482056 CT47A1Q5JQC4 288 aaPredicted RBP17.57■□□□□ 0.4
C9orf3-218ENST00000482056 SPECC1Q5M775 1068 aa17.57■□□□□ 0.4
C9orf3-218ENST00000482056 ENOX1Q8TC92 643 aaKnown RBP17.57■□□□□ 0.4
C9orf3-218ENST00000482056 BRMS1Q9HCU9 246 aa17.57■□□□□ 0.4
C9orf3-218ENST00000482056 DDX41Q9UJV9 622 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms