RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 ZNF280CQ8ND82 737 aa18.66■□□□□ 0.58
HDAC6-224ENST00000481929 SOCS4Q8WXH5 440 aa18.66■□□□□ 0.58
HDAC6-224ENST00000481929 LBHD1Q9BQE6 289 aaPredicted RBP18.66■□□□□ 0.58
HDAC6-224ENST00000481929 TBC1D2Q9BYX2 928 aa18.66■□□□□ 0.58
HDAC6-224ENST00000481929 DDX4Q9NQI0 724 aaKnown RBP18.66■□□□□ 0.58
HDAC6-224ENST00000481929 MORF4L1Q9UBU8 362 aa18.66■□□□□ 0.58
HDAC6-224ENST00000481929 TTC28Q96AY4 2481 aa18.66■□□□□ 0.58
HDAC6-224ENST00000481929 MYH2Q9UKX2 1941 aa18.66■□□□□ 0.58
HDAC6-224ENST00000481929 VCANP13611 3396 aa18.65■□□□□ 0.58
HDAC6-224ENST00000481929 SEMA3EO15041 775 aa18.65■□□□□ 0.58
HDAC6-224ENST00000481929 ATP2B3Q16720 1220 aa18.65■□□□□ 0.58
HDAC6-224ENST00000481929 DZIP1Q86YF9 867 aaKnown RBP18.65■□□□□ 0.58
HDAC6-224ENST00000481929 SLF2Q8IX21 1173 aa18.65■□□□□ 0.58
HDAC6-224ENST00000481929 TRMT44Q8IYL2 757 aaKnown RBP18.65■□□□□ 0.58
HDAC6-224ENST00000481929 NUDT12Q9BQG2 462 aa18.65■□□□□ 0.58
HDAC6-224ENST00000481929 OSBPL5Q9H0X9 879 aaPredicted RBP18.65■□□□□ 0.58
HDAC6-224ENST00000481929 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.65■□□□□ 0.58
HDAC6-224ENST00000481929 PLXNB2O15031 1838 aa18.65■□□□□ 0.58
HDAC6-224ENST00000481929 TBC1D12O60347 775 aa18.64■□□□□ 0.57
HDAC6-224ENST00000481929 XRCC5P13010 732 aaKnown RBP18.64■□□□□ 0.57
HDAC6-224ENST00000481929 ZKSCAN1P17029 563 aaPredicted RBP18.64■□□□□ 0.57
HDAC6-224ENST00000481929 SALL2Q9Y467 1007 aaPredicted RBP18.64■□□□□ 0.57
HDAC6-224ENST00000481929 FAM196BA6NMK8 535 aa18.63■□□□□ 0.57
HDAC6-224ENST00000481929 BTDP43251 543 aa18.63■□□□□ 0.57
HDAC6-224ENST00000481929 IRX3P78415 501 aaPredicted RBP18.63■□□□□ 0.57
HDAC6-224ENST00000481929 CACNB2Q08289 660 aaPredicted RBP18.63■□□□□ 0.57
HDAC6-224ENST00000481929 PDE3AQ14432 1141 aa18.63■□□□□ 0.57
HDAC6-224ENST00000481929 MAFAQ8NHW3 353 aaPredicted RBP18.63■□□□□ 0.57
HDAC6-224ENST00000481929 PHKA1P46020 1223 aa18.62■□□□□ 0.57
HDAC6-224ENST00000481929 RFX5P48382 616 aaPredicted RBP18.62■□□□□ 0.57
HDAC6-224ENST00000481929 SH3D19Q5HYK7 790 aa18.62■□□□□ 0.57
HDAC6-224ENST00000481929 ATG9AQ7Z3C6 839 aa18.62■□□□□ 0.57
HDAC6-224ENST00000481929 CDX2Q99626 313 aaPredicted RBP18.62■□□□□ 0.57
HDAC6-224ENST00000481929 USP17L5A8MUK1 530 aa18.61■□□□□ 0.57
HDAC6-224ENST00000481929 CCND3P30281 292 aaPredicted RBP18.61■□□□□ 0.57
HDAC6-224ENST00000481929 CCDC184Q52MB2 194 aa18.61■□□□□ 0.57
HDAC6-224ENST00000481929 LHX8Q68G74 356 aa18.61■□□□□ 0.57
HDAC6-224ENST00000481929 FAM163AQ96GL9 167 aaPredicted RBP18.61■□□□□ 0.57
HDAC6-224ENST00000481929 AS3MTQ9HBK9 375 aa18.61■□□□□ 0.57
HDAC6-224ENST00000481929 CEP126Q9P2H0 1117 aa18.61■□□□□ 0.57
HDAC6-224ENST00000481929 ABCF2Q9UG63 623 aa18.61■□□□□ 0.57
HDAC6-224ENST00000481929 SPTBN5Q9NRC6 3674 aaKnown RBP18.61■□□□□ 0.57
HDAC6-224ENST00000481929 LAMA2P24043 3122 aaKnown RBP18.6■□□□□ 0.57
HDAC6-224ENST00000481929 MROH7-TTC4A0A0A0MT08 1334 aa18.6■□□□□ 0.57
HDAC6-224ENST00000481929 MAPK4P31152 587 aa18.6■□□□□ 0.57
HDAC6-224ENST00000481929 CCAR1Q8IX12 1150 aaKnown RBP18.6■□□□□ 0.57
HDAC6-224ENST00000481929 GPRC5AQ8NFJ5 357 aa18.6■□□□□ 0.57
HDAC6-224ENST00000481929 PRKAG2Q9UGJ0 569 aa18.6■□□□□ 0.57
HDAC6-224ENST00000481929 NPM3O75607 178 aaKnown RBP18.59■□□□□ 0.57
HDAC6-224ENST00000481929 CAP2P40123 477 aa18.59■□□□□ 0.57
HDAC6-224ENST00000481929 RGS2P41220 211 aa18.59■□□□□ 0.57
HDAC6-224ENST00000481929 SPTY2D1Q68D10 685 aaPredicted RBP18.59■□□□□ 0.57
HDAC6-224ENST00000481929 SENP6Q9GZR1 1112 aaPredicted RBP18.59■□□□□ 0.57
HDAC6-224ENST00000481929 USP44Q9H0E7 712 aa18.59■□□□□ 0.57
HDAC6-224ENST00000481929 SIL1Q9H173 461 aa18.59■□□□□ 0.57
HDAC6-224ENST00000481929 TMOD4Q9NZQ9 345 aa18.59■□□□□ 0.57
HDAC6-224ENST00000481929 FBXO3Q9UK99 471 aa18.59■□□□□ 0.57
HDAC6-224ENST00000481929 ATAD5Q96QE3 1844 aa18.58■□□□□ 0.57
HDAC6-224ENST00000481929 MAST2Q6P0Q8 1798 aa18.58■□□□□ 0.57
HDAC6-224ENST00000481929 ZBTB22O15209 634 aa18.58■□□□□ 0.56
HDAC6-224ENST00000481929 CIAO1O76071 339 aa18.58■□□□□ 0.56
HDAC6-224ENST00000481929 CCL14Q16627 93 aa18.58■□□□□ 0.56
HDAC6-224ENST00000481929 SYMPKQ92797 1274 aaKnown RBP18.58■□□□□ 0.56
HDAC6-224ENST00000481929 P2RX7Q99572 595 aaKnown RBP18.58■□□□□ 0.56
HDAC6-224ENST00000481929 APBA2Q99767 749 aa18.58■□□□□ 0.56
HDAC6-224ENST00000481929 TXNRD2Q9NNW7 524 aa18.58■□□□□ 0.56
HDAC6-224ENST00000481929 GPR75-ASB3A0A0A6YYF3 556 aa18.57■□□□□ 0.56
HDAC6-224ENST00000481929 PEX10O60683 326 aa18.57■□□□□ 0.56
HDAC6-224ENST00000481929 HOXA7P31268 230 aaPredicted RBP18.57■□□□□ 0.56
HDAC6-224ENST00000481929 RHBDL3P58872 404 aa18.57■□□□□ 0.56
HDAC6-224ENST00000481929 HERVK_113P62684 666 aa18.57■□□□□ 0.56
HDAC6-224ENST00000481929 MTMR2Q13614 643 aa18.57■□□□□ 0.56
HDAC6-224ENST00000481929 RASGRF1Q13972 1273 aa18.57■□□□□ 0.56
HDAC6-224ENST00000481929 CCDC102BQ68D86 513 aa18.57■□□□□ 0.56
HDAC6-224ENST00000481929 USP6NLQ92738 828 aa18.57■□□□□ 0.56
HDAC6-224ENST00000481929 SEMA6BQ9H3T3 888 aa18.57■□□□□ 0.56
HDAC6-224ENST00000481929 PDS5AQ29RF7 1337 aaKnown RBP18.56■□□□□ 0.56
HDAC6-224ENST00000481929 GPR142Q7Z601 462 aa18.56■□□□□ 0.56
HDAC6-224ENST00000481929 WDR18Q9BV38 432 aa18.56■□□□□ 0.56
HDAC6-224ENST00000481929 CWC22Q9HCG8 908 aaKnown RBP18.56■□□□□ 0.56
HDAC6-224ENST00000481929 EYSQ5T1H1 3165 aa18.55■□□□□ 0.56
HDAC6-224ENST00000481929 PTPRCP08575 1304 aa18.55■□□□□ 0.56
HDAC6-224ENST00000481929 MAP4K4O95819 1239 aaPredicted RBP18.55■□□□□ 0.56
HDAC6-224ENST00000481929 ADORA1P30542 326 aa18.55■□□□□ 0.56
HDAC6-224ENST00000481929 ATN1P54259 1190 aaPredicted RBP18.55■□□□□ 0.56
HDAC6-224ENST00000481929 BACE1P56817 501 aa18.55■□□□□ 0.56
HDAC6-224ENST00000481929 ERVK-9P63128 1117 aa18.55■□□□□ 0.56
HDAC6-224ENST00000481929 ERVK-24P63145 666 aa18.55■□□□□ 0.56
HDAC6-224ENST00000481929 MECOMQ03112 1051 aa18.55■□□□□ 0.56
HDAC6-224ENST00000481929 RRP1BQ14684 758 aaKnown RBP18.55■□□□□ 0.56
HDAC6-224ENST00000481929 MORN1Q5T089 497 aa18.55■□□□□ 0.56
HDAC6-224ENST00000481929 ERICH6Q7L0X2 663 aa18.55■□□□□ 0.56
HDAC6-224ENST00000481929 PLEKHH3Q7Z736 793 aa18.55■□□□□ 0.56
HDAC6-224ENST00000481929 GTF3C2Q8WUA4 911 aaPredicted RBP18.55■□□□□ 0.56
HDAC6-224ENST00000481929 MYLIPQ8WY64 445 aa18.55■□□□□ 0.56
HDAC6-224ENST00000481929 PORCNQ9H237 461 aa18.55■□□□□ 0.56
HDAC6-224ENST00000481929 HERC5Q9UII4 1024 aaKnown RBP18.55■□□□□ 0.56
HDAC6-224ENST00000481929 FRMPD3Q5JV73 1810 aa18.54■□□□□ 0.56
HDAC6-224ENST00000481929 FOSL2P15408 326 aa18.54■□□□□ 0.56
HDAC6-224ENST00000481929 MFSD14CQ5VZR4 134 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms