RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 SSC5DA1L4H1 1573 aa11.28□□□□□ -0.6
HLA-B-253ENST00000481849 POLR2AP24928 1970 aaKnown RBP11.28□□□□□ -0.6
HLA-B-253ENST00000481849 ZNF646O15015 1829 aaPredicted RBP11.28□□□□□ -0.6
HLA-B-253ENST00000481849 DDX11L8A8MPP1 907 aa11.28□□□□□ -0.6
HLA-B-253ENST00000481849 TCP10L2B9ZVM9 353 aa11.28□□□□□ -0.6
HLA-B-253ENST00000481849 GPR25O00155 361 aa11.28□□□□□ -0.6
HLA-B-253ENST00000481849 PPP1R12BO60237 982 aaPredicted RBP11.28□□□□□ -0.6
HLA-B-253ENST00000481849 SLFN5Q08AF3 891 aa11.28□□□□□ -0.6
HLA-B-253ENST00000481849 GRIK5Q16478 980 aa11.28□□□□□ -0.6
HLA-B-253ENST00000481849 RABL6Q3YEC7 729 aaPredicted RBP11.28□□□□□ -0.6
HLA-B-253ENST00000481849 SUPT20HL1Q3ZLR7 823 aa11.28□□□□□ -0.6
HLA-B-253ENST00000481849 ZNF70Q9UC06 446 aaPredicted RBP11.28□□□□□ -0.6
HLA-B-253ENST00000481849 PPP2R3BQ9Y5P8 575 aa11.28□□□□□ -0.6
HLA-B-253ENST00000481849 PTPRCP08575 1304 aa11.28□□□□□ -0.6
HLA-B-253ENST00000481849 COL1A1P02452 1464 aaPredicted RBP11.27□□□□□ -0.6
HLA-B-253ENST00000481849 CRKP46108 304 aa11.27□□□□□ -0.61
HLA-B-253ENST00000481849 CAVIN4Q5BKX8 364 aa11.27□□□□□ -0.61
HLA-B-253ENST00000481849 ZNF598Q86UK7 904 aaKnown RBP11.27□□□□□ -0.61
HLA-B-253ENST00000481849 WNK4Q96J92 1243 aa11.27□□□□□ -0.61
HLA-B-253ENST00000481849 SPSB2Q99619 263 aa11.27□□□□□ -0.61
HLA-B-253ENST00000481849 USP44Q9H0E7 712 aa11.27□□□□□ -0.61
HLA-B-253ENST00000481849 SMC4Q9NTJ3 1288 aa11.27□□□□□ -0.61
HLA-B-253ENST00000481849 CENPFP49454 3210 aa11.27□□□□□ -0.61
HLA-B-253ENST00000481849 MANSC4A6NHS7 340 aaPredicted RBP11.26□□□□□ -0.61
HLA-B-253ENST00000481849 USP2O75604 605 aaPredicted RBP11.26□□□□□ -0.61
HLA-B-253ENST00000481849 PDE8BO95263 885 aa11.26□□□□□ -0.61
HLA-B-253ENST00000481849 IREB2P48200 963 aaKnown RBP11.26□□□□□ -0.61
HLA-B-253ENST00000481849 CACNB3P54284 484 aa11.26□□□□□ -0.61
HLA-B-253ENST00000481849 MAP3K11Q16584 847 aa11.26□□□□□ -0.61
HLA-B-253ENST00000481849 FBXO33Q7Z6M2 555 aa11.26□□□□□ -0.61
HLA-B-253ENST00000481849 GPIHBP1Q8IV16 184 aa11.26□□□□□ -0.61
HLA-B-253ENST00000481849 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.26□□□□□ -0.61
HLA-B-253ENST00000481849 DZIP1LQ8IYY4 767 aaKnown RBP11.26□□□□□ -0.61
HLA-B-253ENST00000481849 NLRP7Q8WX94 980 aa11.26□□□□□ -0.61
HLA-B-253ENST00000481849 EMID1Q96A84 441 aaPredicted RBP11.26□□□□□ -0.61
HLA-B-253ENST00000481849 ELP3Q9H9T3 547 aa11.26□□□□□ -0.61
HLA-B-253ENST00000481849 SERPINA10Q9UK55 444 aa11.26□□□□□ -0.61
HLA-B-253ENST00000481849 GPR37O15354 613 aa11.25□□□□□ -0.61
HLA-B-253ENST00000481849 FKTNO75072 461 aa11.25□□□□□ -0.61
HLA-B-253ENST00000481849 GJA5P36382 358 aa11.25□□□□□ -0.61
HLA-B-253ENST00000481849 TNFAIP1Q13829 316 aa11.25□□□□□ -0.61
HLA-B-253ENST00000481849 LIAT1Q6ZQX7 453 aa11.25□□□□□ -0.61
HLA-B-253ENST00000481849 TMEM39BQ9GZU3 492 aa11.25□□□□□ -0.61
HLA-B-253ENST00000481849 UNC79Q9P2D8 2635 aa11.24□□□□□ -0.61
HLA-B-253ENST00000481849 KIAA0100Q14667 2235 aaKnown RBP11.24□□□□□ -0.61
HLA-B-253ENST00000481849 IGF2BP3O00425 579 aaKnown RBP eCLIP11.24□□□□□ -0.61
HLA-B-253ENST00000481849 IFIT1P09914 478 aaKnown RBP11.24□□□□□ -0.61
HLA-B-253ENST00000481849 ZBTB48P10074 688 aaPredicted RBP11.24□□□□□ -0.61
HLA-B-253ENST00000481849 TNNI2P48788 182 aa11.24□□□□□ -0.61
HLA-B-253ENST00000481849 PUM3Q15397 648 aaKnown RBP11.24□□□□□ -0.61
HLA-B-253ENST00000481849 ANKRD13AQ8IZ07 590 aa11.24□□□□□ -0.61
HLA-B-253ENST00000481849 VGLL2Q8N8G2 317 aa11.24□□□□□ -0.61
HLA-B-253ENST00000481849 TEKT1Q969V4 418 aa11.24□□□□□ -0.61
HLA-B-253ENST00000481849 SIL1Q9H173 461 aa11.24□□□□□ -0.61
HLA-B-253ENST00000481849 HTTP42858 3142 aa11.23□□□□□ -0.61
HLA-B-253ENST00000481849 EYA2O00167 538 aa11.23□□□□□ -0.61
HLA-B-253ENST00000481849 ALDH1A1P00352 501 aa11.23□□□□□ -0.61
HLA-B-253ENST00000481849 RFX5P48382 616 aaPredicted RBP11.23□□□□□ -0.61
HLA-B-253ENST00000481849 PKN2Q16513 984 aaKnown RBP11.23□□□□□ -0.61
HLA-B-253ENST00000481849 ALDH1L2Q3SY69 923 aa11.23□□□□□ -0.61
HLA-B-253ENST00000481849 ZNF697Q5TEC3 545 aa11.23□□□□□ -0.61
HLA-B-253ENST00000481849 ZNF787Q6DD87 383 aa11.23□□□□□ -0.61
HLA-B-253ENST00000481849 TRIM67Q6ZTA4 783 aa11.23□□□□□ -0.61
HLA-B-253ENST00000481849 TBC1D22AQ8WUA7 517 aa11.23□□□□□ -0.61
HLA-B-253ENST00000481849 OPTNQ96CV9 577 aa11.23□□□□□ -0.61
HLA-B-253ENST00000481849 TEPSINQ96N21 525 aa11.23□□□□□ -0.61
HLA-B-253ENST00000481849 NOB1Q9ULX3 412 aaKnown RBP11.23□□□□□ -0.61
HLA-B-253ENST00000481849 SYNGAP1Q96PV0 1343 aa11.23□□□□□ -0.61
HLA-B-253ENST00000481849 A0A1B0GUL6 1792 aa11.23□□□□□ -0.61
HLA-B-253ENST00000481849 UBTFL1P0CB47 393 aaPredicted RBP11.22□□□□□ -0.61
HLA-B-253ENST00000481849 SLC5A1P13866 664 aa11.22□□□□□ -0.61
HLA-B-253ENST00000481849 INHBEP58166 350 aa11.22□□□□□ -0.61
HLA-B-253ENST00000481849 FUT2Q10981 343 aa11.22□□□□□ -0.61
HLA-B-253ENST00000481849 PKDCCQ504Y2 493 aa11.22□□□□□ -0.61
HLA-B-253ENST00000481849 EYSQ5T1H1 3165 aa11.22□□□□□ -0.61
HLA-B-253ENST00000481849 FBXO46Q6PJ61 603 aaPredicted RBP11.22□□□□□ -0.61
HLA-B-253ENST00000481849 TMOD2Q9NZR1 351 aa11.22□□□□□ -0.61
HLA-B-253ENST00000481849 TRIM17Q9Y577 477 aa11.22□□□□□ -0.61
HLA-B-253ENST00000481849 PRUNE2Q8WUY3 3088 aa11.21□□□□□ -0.61
HLA-B-253ENST00000481849 BAHCC1Q9P281 2608 aa11.21□□□□□ -0.61
HLA-B-253ENST00000481849 FGFR2P21802 821 aa11.21□□□□□ -0.61
HLA-B-253ENST00000481849 CRHR2Q13324 411 aa11.21□□□□□ -0.61
HLA-B-253ENST00000481849 VGLL4Q14135 290 aa11.21□□□□□ -0.61
HLA-B-253ENST00000481849 NOM1Q5C9Z4 860 aaKnown RBP11.21□□□□□ -0.61
HLA-B-253ENST00000481849 MORN1Q5T089 497 aa11.21□□□□□ -0.61
HLA-B-253ENST00000481849 OTUD7BQ6GQQ9 843 aa11.21□□□□□ -0.61
HLA-B-253ENST00000481849 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.21□□□□□ -0.61
HLA-B-253ENST00000481849 ATG9AQ7Z3C6 839 aa11.21□□□□□ -0.61
HLA-B-253ENST00000481849 PTPN18Q99952 460 aa11.21□□□□□ -0.61
HLA-B-253ENST00000481849 CFHR5Q9BXR6 569 aa11.21□□□□□ -0.61
HLA-B-253ENST00000481849 LRRFIP2Q9Y608 721 aaKnown RBP11.21□□□□□ -0.61
HLA-B-253ENST00000481849 UNCXA6NJT0 531 aa11.2□□□□□ -0.62
HLA-B-253ENST00000481849 TULP1O00294 542 aaPredicted RBP11.2□□□□□ -0.62
HLA-B-253ENST00000481849 GCGRP47871 477 aa11.2□□□□□ -0.62
HLA-B-253ENST00000481849 HDLBPQ00341 1268 aaKnown RBP11.2□□□□□ -0.62
HLA-B-253ENST00000481849 ATP2B3Q16720 1220 aa11.2□□□□□ -0.62
HLA-B-253ENST00000481849 APOBEC3HQ6NTF7 200 aaKnown RBP11.2□□□□□ -0.62
HLA-B-253ENST00000481849 TRMT2AQ8IZ69 625 aaKnown RBP11.2□□□□□ -0.62
HLA-B-253ENST00000481849 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.2□□□□□ -0.623e-15■□□□□ 9.4
HLA-B-253ENST00000481849 CD99L2Q8TCZ2 262 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms