RNA–Protein interactions for RNA: ENST00000481385.6

PHF3-204, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-204ENST00000481385 ZNF654Q8IZM8 581 aa16.26■□□□□ 0.19
PHF3-204ENST00000481385 TNKSO95271 1327 aa16.25■□□□□ 0.19
PHF3-204ENST00000481385 PRDM1O75626 825 aa16.25■□□□□ 0.19
PHF3-204ENST00000481385 SYKP43405 635 aa16.25■□□□□ 0.19
PHF3-204ENST00000481385 NR5A1Q13285 461 aa16.25■□□□□ 0.19
PHF3-204ENST00000481385 LRRC8AQ8IWT6 810 aa16.25■□□□□ 0.19
PHF3-204ENST00000481385 DIS3L2Q8IYB7 885 aaKnown RBP16.25■□□□□ 0.19
PHF3-204ENST00000481385 CRACR2BQ8N4Y2 399 aaPredicted RBP16.25■□□□□ 0.19
PHF3-204ENST00000481385 OXER1Q8TDS5 423 aa16.25■□□□□ 0.19
PHF3-204ENST00000481385 PRIMPOLQ96LW4 560 aa16.25■□□□□ 0.19
PHF3-204ENST00000481385 PNOCQ13519 176 aa16.25■□□□□ 0.19
PHF3-204ENST00000481385 NCAPHQ15003 741 aa16.25■□□□□ 0.19
PHF3-204ENST00000481385 FAM182BQ5T319 152 aa16.25■□□□□ 0.19
PHF3-204ENST00000481385 RESP18Q5W5W9 173 aa16.25■□□□□ 0.19
PHF3-204ENST00000481385 FILIP1Q7Z7B0 1213 aa16.25■□□□□ 0.19
PHF3-204ENST00000481385 NLRP12P59046 1061 aa16.24■□□□□ 0.19
PHF3-204ENST00000481385 SART3Q15020 963 aaKnown RBP16.24■□□□□ 0.19
PHF3-204ENST00000481385 FANCBQ8NB91 859 aa16.24■□□□□ 0.19
PHF3-204ENST00000481385 BAZ2AQ9UIF9 1905 aaKnown RBP16.24■□□□□ 0.19
PHF3-204ENST00000481385 NAT10Q9H0A0 1025 aaKnown RBP16.24■□□□□ 0.19
PHF3-204ENST00000481385 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.24■□□□□ 0.19
PHF3-204ENST00000481385 ANAPC4Q9UJX5 808 aa16.24■□□□□ 0.19
PHF3-204ENST00000481385 hCG_1642624A0A1W2PR95 340 aa16.23■□□□□ 0.19
PHF3-204ENST00000481385 ERICH2A1L162 156 aa16.23■□□□□ 0.19
PHF3-204ENST00000481385 FOXN1O15353 648 aa16.23■□□□□ 0.19
PHF3-204ENST00000481385 LONRF3Q496Y0 759 aa16.23■□□□□ 0.19
PHF3-204ENST00000481385 CAVIN4Q5BKX8 364 aa16.23■□□□□ 0.19
PHF3-204ENST00000481385 ENAHQ8N8S7 591 aaPredicted RBP16.23■□□□□ 0.19
PHF3-204ENST00000481385 C16orf45Q96MC5 204 aaPredicted RBP16.23■□□□□ 0.19
PHF3-204ENST00000481385 UBAC1Q9BSL1 405 aa16.23■□□□□ 0.19
PHF3-204ENST00000481385 HSD3B7Q9H2F3 369 aa16.23■□□□□ 0.19
PHF3-204ENST00000481385 TFCP2L1Q9NZI6 479 aa16.23■□□□□ 0.19
PHF3-204ENST00000481385 FAM237AA0A1B0GTK4 181 aa16.23■□□□□ 0.19
PHF3-204ENST00000481385 GTF2E1P29083 439 aaPredicted RBP16.23■□□□□ 0.19
PHF3-204ENST00000481385 METTL16Q86W50 562 aaKnown RBP16.23■□□□□ 0.19
PHF3-204ENST00000481385 FOXP4Q8IVH2 680 aaPredicted RBP16.23■□□□□ 0.19
PHF3-204ENST00000481385 C8orf37Q96NL8 207 aa16.23■□□□□ 0.19
PHF3-204ENST00000481385 BPIFA3Q9BQP9 254 aa16.23■□□□□ 0.19
PHF3-204ENST00000481385 RNF41Q9H4P4 317 aaPredicted RBP16.23■□□□□ 0.19
PHF3-204ENST00000481385 GNL3LQ9NVN8 582 aaKnown RBP16.23■□□□□ 0.19
PHF3-204ENST00000481385 JAG2Q9Y219 1238 aa16.23■□□□□ 0.19
PHF3-204ENST00000481385 DUOX1Q9NRD9 1551 aa16.23■□□□□ 0.19
PHF3-204ENST00000481385 CNTNAP4Q9C0A0 1308 aa16.23■□□□□ 0.19
PHF3-204ENST00000481385 USP27XA6NNY8 438 aa16.22■□□□□ 0.19
PHF3-204ENST00000481385 RBM6P78332 1123 aaKnown RBP16.22■□□□□ 0.19
PHF3-204ENST00000481385 TUBE1Q9UJT0 475 aa16.22■□□□□ 0.19
PHF3-204ENST00000481385 SLC10A5Q5PT55 438 aa16.22■□□□□ 0.19
PHF3-204ENST00000481385 FBXO33Q7Z6M2 555 aa16.22■□□□□ 0.19
PHF3-204ENST00000481385 TXNRD3Q86VQ6 643 aa16.22■□□□□ 0.19
PHF3-204ENST00000481385 TIGD1Q96MW7 591 aa16.22■□□□□ 0.19
PHF3-204ENST00000481385 PCDHB6Q9Y5E3 794 aa16.22■□□□□ 0.19
PHF3-204ENST00000481385 FAM205CA6NFA0 338 aa16.21■□□□□ 0.19
PHF3-204ENST00000481385 GTF2F1P35269 517 aaKnown RBP eCLIP16.21■□□□□ 0.192e-6■■■□□ 17.2
PHF3-204ENST00000481385 CTR9Q6PD62 1173 aa16.21■□□□□ 0.19
PHF3-204ENST00000481385 TRIM22Q8IYM9 498 aa16.21■□□□□ 0.19
PHF3-204ENST00000481385 ESR2Q92731 530 aa16.21■□□□□ 0.19
PHF3-204ENST00000481385 NSUN4Q96CB9 384 aaKnown RBP16.21■□□□□ 0.19
PHF3-204ENST00000481385 XPO4Q9C0E2 1151 aaKnown RBP16.21■□□□□ 0.19
PHF3-204ENST00000481385 ZNF831Q5JPB2 1677 aa16.21■□□□□ 0.19
PHF3-204ENST00000481385 RIOK3O14730 519 aaKnown RBP16.21■□□□□ 0.19
PHF3-204ENST00000481385 DEXIO95424 95 aa16.21■□□□□ 0.19
PHF3-204ENST00000481385 CCZ1BP86790 482 aa16.21■□□□□ 0.19
PHF3-204ENST00000481385 CCZ1P86791 482 aaPredicted RBP16.21■□□□□ 0.19
PHF3-204ENST00000481385 MECOMQ03112 1051 aa16.21■□□□□ 0.19
PHF3-204ENST00000481385 ZRSR1Q15695 479 aaKnown RBP16.21■□□□□ 0.19
PHF3-204ENST00000481385 ZNF710Q8N1W2 664 aa16.21■□□□□ 0.19
PHF3-204ENST00000481385 JMYQ8N9B5 988 aa16.21■□□□□ 0.19
PHF3-204ENST00000481385 MYH2Q9UKX2 1941 aa16.21■□□□□ 0.19
PHF3-204ENST00000481385 CUTAO60888 179 aa16.21■□□□□ 0.18
PHF3-204ENST00000481385 PLEKHA8P1O95397 391 aa16.21■□□□□ 0.18
PHF3-204ENST00000481385 ATP1A3P13637 1013 aa16.21■□□□□ 0.18
PHF3-204ENST00000481385 PRDX5P30044 214 aa16.21■□□□□ 0.18
PHF3-204ENST00000481385 PKN1Q16512 942 aa16.21■□□□□ 0.18
PHF3-204ENST00000481385 EARS2Q5JPH6 523 aaKnown RBP16.21■□□□□ 0.18
PHF3-204ENST00000481385 WASF1Q92558 559 aa16.21■□□□□ 0.18
PHF3-204ENST00000481385 ZSCAN10Q96SZ4 725 aaPredicted RBP16.21■□□□□ 0.18
PHF3-204ENST00000481385 IFNKQ9P0W0 207 aa16.21■□□□□ 0.18
PHF3-204ENST00000481385 FBXO2Q9UK22 296 aaPredicted RBP16.21■□□□□ 0.18
PHF3-204ENST00000481385 KCNH3Q9ULD8 1083 aa16.21■□□□□ 0.18
PHF3-204ENST00000481385 NMT2O60551 498 aa16.2■□□□□ 0.18
PHF3-204ENST00000481385 RPS8P62241 208 aaKnown RBP16.2■□□□□ 0.18
PHF3-204ENST00000481385 FUT2Q10981 343 aa16.2■□□□□ 0.18
PHF3-204ENST00000481385 AATFQ9NY61 560 aaKnown RBP eCLIP16.2■□□□□ 0.18
PHF3-204ENST00000481385 NARFQ9UHQ1 456 aa16.2■□□□□ 0.18
PHF3-204ENST00000481385 USP17L12C9JPN9 530 aa16.2■□□□□ 0.18
PHF3-204ENST00000481385 USP17L21D6R901 530 aa16.2■□□□□ 0.18
PHF3-204ENST00000481385 GNPATO15228 680 aa16.2■□□□□ 0.18
PHF3-204ENST00000481385 ATP2B1P20020 1258 aa16.2■□□□□ 0.18
PHF3-204ENST00000481385 BMP6P22004 513 aa16.2■□□□□ 0.18
PHF3-204ENST00000481385 NBPF5PQ86XG9 351 aaPredicted RBP16.2■□□□□ 0.18
PHF3-204ENST00000481385 TMTC2Q8N394 836 aa16.2■□□□□ 0.18
PHF3-204ENST00000481385 KRI1Q8N9T8 703 aaKnown RBP16.2■□□□□ 0.18
PHF3-204ENST00000481385 MTA3Q9BTC8 594 aa16.2■□□□□ 0.18
PHF3-204ENST00000481385 BRIP1Q9BX63 1249 aa16.2■□□□□ 0.18
PHF3-204ENST00000481385 FOXP1Q9H334 677 aaPredicted RBP16.2■□□□□ 0.18
PHF3-204ENST00000481385 VPS54Q9P1Q0 977 aa16.2■□□□□ 0.18
PHF3-204ENST00000481385 LMOD1P29536 600 aaPredicted RBP16.19■□□□□ 0.18
PHF3-204ENST00000481385 KRBA2Q6ZNG9 492 aa16.19■□□□□ 0.18
PHF3-204ENST00000481385 SETDB2Q96T68 719 aa16.19■□□□□ 0.18
PHF3-204ENST00000481385 WNT7AO00755 349 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms