RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 DDX19BQ9UMR2 479 aa14.84□□□□□ -0.03
SQSTM1-207ENST00000481335 MYH1P12882 1939 aa14.84□□□□□ -0.03
SQSTM1-207ENST00000481335 GPAT2Q6NUI2 795 aa14.83□□□□□ -0.04
SQSTM1-207ENST00000481335 RPAP2Q8IXW5 612 aaPredicted RBP14.83□□□□□ -0.04
SQSTM1-207ENST00000481335 TMEM106CQ9BVX2 250 aa14.83□□□□□ -0.04
SQSTM1-207ENST00000481335 GINM1Q9NU53 330 aa14.83□□□□□ -0.04
SQSTM1-207ENST00000481335 PTCH2Q9Y6C5 1203 aa14.83□□□□□ -0.04
SQSTM1-207ENST00000481335 HMMRO75330 724 aa14.82□□□□□ -0.04
SQSTM1-207ENST00000481335 BCRP11274 1271 aa14.82□□□□□ -0.04
SQSTM1-207ENST00000481335 ZAP70P43403 619 aa14.82□□□□□ -0.04
SQSTM1-207ENST00000481335 METTL16Q86W50 562 aaKnown RBP14.82□□□□□ -0.04
SQSTM1-207ENST00000481335 PROCA1Q8NCQ7 364 aaPredicted RBP14.82□□□□□ -0.04
SQSTM1-207ENST00000481335 SH3RF3Q8TEJ3 882 aaPredicted RBP14.82□□□□□ -0.04
SQSTM1-207ENST00000481335 EAF2Q96CJ1 260 aaPredicted RBP14.82□□□□□ -0.04
SQSTM1-207ENST00000481335 SNRKQ9NRH2 765 aa14.82□□□□□ -0.04
SQSTM1-207ENST00000481335 AATFQ9NY61 560 aaKnown RBP eCLIP14.82□□□□□ -0.041e-6■□□□□ 10.1
SQSTM1-207ENST00000481335 PNMA3Q9UL41 463 aa14.82□□□□□ -0.04
SQSTM1-207ENST00000481335 AGTPBP1Q9UPW5 1226 aa14.82□□□□□ -0.04
SQSTM1-207ENST00000481335 CAP2P40123 477 aa14.81□□□□□ -0.04
SQSTM1-207ENST00000481335 PSMC4P43686 418 aa14.81□□□□□ -0.04
SQSTM1-207ENST00000481335 PANK1Q8TE04 598 aa14.81□□□□□ -0.04
SQSTM1-207ENST00000481335 ARHGAP39Q9C0H5 1083 aa14.81□□□□□ -0.04
SQSTM1-207ENST00000481335 AS3MTQ9HBK9 375 aa14.81□□□□□ -0.04
SQSTM1-207ENST00000481335 SRRDQ9UH36 339 aa14.81□□□□□ -0.04
SQSTM1-207ENST00000481335 CPA4Q9UI42 421 aa14.81□□□□□ -0.04
SQSTM1-207ENST00000481335 FLT1P17948 1338 aa14.81□□□□□ -0.04
SQSTM1-207ENST00000481335 POTEFA5A3E0 1075 aa14.8□□□□□ -0.04
SQSTM1-207ENST00000481335 ASNSP08243 561 aa14.8□□□□□ -0.04
SQSTM1-207ENST00000481335 FCGRTP55899 365 aa14.8□□□□□ -0.04
SQSTM1-207ENST00000481335 PABPC4Q13310 644 aaKnown RBP eCLIP14.8□□□□□ -0.04
SQSTM1-207ENST00000481335 GADL1Q6ZQY3 521 aa14.8□□□□□ -0.04
SQSTM1-207ENST00000481335 FOXP4Q8IVH2 680 aaPredicted RBP14.8□□□□□ -0.04
SQSTM1-207ENST00000481335 ZNF280CQ8ND82 737 aa14.8□□□□□ -0.04
SQSTM1-207ENST00000481335 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.8□□□□□ -0.04
SQSTM1-207ENST00000481335 KIF1BPQ96EK5 621 aa14.8□□□□□ -0.04
SQSTM1-207ENST00000481335 TRIM47Q96LD4 638 aa14.8□□□□□ -0.04
SQSTM1-207ENST00000481335 CCDC8Q9H0W5 538 aaPredicted RBP14.8□□□□□ -0.04
SQSTM1-207ENST00000481335 TLR7Q9NYK1 1049 aaKnown RBP14.8□□□□□ -0.04
SQSTM1-207ENST00000481335 EXOC6BQ9Y2D4 811 aa14.8□□□□□ -0.04
SQSTM1-207ENST00000481335 DDX60LQ5H9U9 1706 aaKnown RBP14.8□□□□□ -0.04
SQSTM1-207ENST00000481335 TRIM75PA6NK02 468 aa14.79□□□□□ -0.04
SQSTM1-207ENST00000481335 USP17L5A8MUK1 530 aa14.79□□□□□ -0.04
SQSTM1-207ENST00000481335 HLA-DOAP06340 250 aa14.79□□□□□ -0.04
SQSTM1-207ENST00000481335 OSBPP22059 807 aa14.79□□□□□ -0.04
SQSTM1-207ENST00000481335 MAP3K12Q12852 859 aa14.79□□□□□ -0.04
SQSTM1-207ENST00000481335 TTF1Q15361 905 aaPredicted RBP14.79□□□□□ -0.04
SQSTM1-207ENST00000481335 SH3D19Q5HYK7 790 aa14.79□□□□□ -0.04
SQSTM1-207ENST00000481335 ADGRA1Q86SQ6 560 aa14.79□□□□□ -0.04
SQSTM1-207ENST00000481335 AACSQ86V21 672 aa14.79□□□□□ -0.04
SQSTM1-207ENST00000481335 CLASRPQ8N2M8 674 aaKnown RBP14.79□□□□□ -0.04
SQSTM1-207ENST00000481335 RHPN1Q8TCX5 695 aa14.79□□□□□ -0.04
SQSTM1-207ENST00000481335 SMCR8Q8TEV9 937 aaPredicted RBP14.79□□□□□ -0.04
SQSTM1-207ENST00000481335 PIH1D3Q9NQM4 214 aaKnown RBP14.79□□□□□ -0.04
SQSTM1-207ENST00000481335 ZBTB40Q9NUA8 1239 aa14.79□□□□□ -0.04
SQSTM1-207ENST00000481335 MYPNQ86TC9 1320 aa14.78□□□□□ -0.04
SQSTM1-207ENST00000481335 RAB11FIP3O75154 756 aa14.78□□□□□ -0.04
SQSTM1-207ENST00000481335 IDH1O75874 414 aaKnown RBP14.78□□□□□ -0.04
SQSTM1-207ENST00000481335 FMNL1O95466 1100 aaPredicted RBP14.78□□□□□ -0.04
SQSTM1-207ENST00000481335 CYP2C8P10632 490 aa14.78□□□□□ -0.04
SQSTM1-207ENST00000481335 CAPN2P17655 700 aa14.78□□□□□ -0.04
SQSTM1-207ENST00000481335 FAM110CQ1W6H9 321 aa14.78□□□□□ -0.04
SQSTM1-207ENST00000481335 RAET1EQ8TD07 263 aa14.78□□□□□ -0.04
SQSTM1-207ENST00000481335 TGFBRAP1Q8WUH2 860 aa14.78□□□□□ -0.04
SQSTM1-207ENST00000481335 WDR18Q9BV38 432 aa14.78□□□□□ -0.04
SQSTM1-207ENST00000481335 TRIM34Q9BYJ4 488 aa14.78□□□□□ -0.04
SQSTM1-207ENST00000481335 NAV1Q8NEY1 1877 aa14.78□□□□□ -0.04
SQSTM1-207ENST00000481335 DOCK3Q8IZD9 2030 aa14.77□□□□□ -0.04
SQSTM1-207ENST00000481335 MYH7P12883 1935 aa14.77□□□□□ -0.04
SQSTM1-207ENST00000481335 FAM196BA6NMK8 535 aa14.77□□□□□ -0.05
SQSTM1-207ENST00000481335 CYP7A1P22680 504 aa14.77□□□□□ -0.05
SQSTM1-207ENST00000481335 CTGFP29279 349 aa14.77□□□□□ -0.05
SQSTM1-207ENST00000481335 GRK4P32298 578 aa14.77□□□□□ -0.05
SQSTM1-207ENST00000481335 GCLCP48506 637 aaPredicted RBP14.77□□□□□ -0.05
SQSTM1-207ENST00000481335 SPP2Q13103 211 aa14.77□□□□□ -0.05
SQSTM1-207ENST00000481335 SLC4A8Q2Y0W8 1093 aa14.77□□□□□ -0.05
SQSTM1-207ENST00000481335 MAPKAPK5Q8IW41 473 aa14.77□□□□□ -0.05
SQSTM1-207ENST00000481335 CRACR2BQ8N4Y2 399 aaPredicted RBP14.77□□□□□ -0.05
SQSTM1-207ENST00000481335 SLAIN1Q8ND83 568 aa14.77□□□□□ -0.05
SQSTM1-207ENST00000481335 NKX2-3Q8TAU0 364 aa14.77□□□□□ -0.05
SQSTM1-207ENST00000481335 EHD4Q9H223 541 aa14.77□□□□□ -0.05
SQSTM1-207ENST00000481335 RCAN3Q9UKA8 241 aa14.77□□□□□ -0.05
SQSTM1-207ENST00000481335 C19orf81C9J6K1 198 aa14.76□□□□□ -0.05
SQSTM1-207ENST00000481335 SLURP2P0DP57 97 aa14.76□□□□□ -0.05
SQSTM1-207ENST00000481335 PDE3AQ14432 1141 aa14.76□□□□□ -0.05
SQSTM1-207ENST00000481335 MAGEB6Q8N7X4 407 aa14.76□□□□□ -0.05
SQSTM1-207ENST00000481335 GCC1Q96CN9 775 aa14.76□□□□□ -0.05
SQSTM1-207ENST00000481335 DNAJC18Q9H819 358 aa14.76□□□□□ -0.05
SQSTM1-207ENST00000481335 TAOK2Q9UL54 1235 aa14.76□□□□□ -0.05
SQSTM1-207ENST00000481335 EN2P19622 333 aaPredicted RBP14.75□□□□□ -0.05
SQSTM1-207ENST00000481335 BACE1P56817 501 aa14.75□□□□□ -0.05
SQSTM1-207ENST00000481335 UBXN2AP68543 259 aa14.75□□□□□ -0.05
SQSTM1-207ENST00000481335 IRF5Q13568 498 aa14.75□□□□□ -0.05
SQSTM1-207ENST00000481335 PXYLP1Q8TE99 480 aa14.75□□□□□ -0.05
SQSTM1-207ENST00000481335 SH3TC2Q8TF17 1288 aa14.75□□□□□ -0.05
SQSTM1-207ENST00000481335 PALD1Q9ULE6 856 aa14.75□□□□□ -0.05
SQSTM1-207ENST00000481335 COG6Q9Y2V7 657 aa14.75□□□□□ -0.05
SQSTM1-207ENST00000481335 MYH8P13535 1937 aa14.74□□□□□ -0.05
SQSTM1-207ENST00000481335 IFIT2P09913 472 aaKnown RBP14.74□□□□□ -0.05
SQSTM1-207ENST00000481335 HOXA7P31268 230 aaPredicted RBP14.74□□□□□ -0.05
SQSTM1-207ENST00000481335 USP5P45974 858 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms