RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 KRT25Q7Z3Z0 450 aa21.99■■□□□ 1.11
CCM2-214ENST00000481194 OSBP2Q969R2 916 aa21.99■■□□□ 1.11
CCM2-214ENST00000481194 GPCPD1Q9NPB8 672 aa21.99■■□□□ 1.11
CCM2-214ENST00000481194 SUGT1Q9Y2Z0 365 aa21.99■■□□□ 1.11
CCM2-214ENST00000481194 TOP1P11387 765 aaKnown RBP21.99■■□□□ 1.11
CCM2-214ENST00000481194 SCNN1DP51172 638 aa21.99■■□□□ 1.11
CCM2-214ENST00000481194 V9GY48 417 aaPredicted RBP21.99■■□□□ 1.11
CCM2-214ENST00000481194 STAT6P42226 847 aa21.99■■□□□ 1.11
CCM2-214ENST00000481194 MECOMQ03112 1051 aa21.99■■□□□ 1.11
CCM2-214ENST00000481194 SYCP1Q15431 976 aa21.99■■□□□ 1.11
CCM2-214ENST00000481194 FAM114A1Q8IWE2 563 aa21.99■■□□□ 1.11
CCM2-214ENST00000481194 PRR5LQ6MZQ0 368 aa21.98■■□□□ 1.11
CCM2-214ENST00000481194 TNKSO95271 1327 aa21.98■■□□□ 1.11
CCM2-214ENST00000481194 ME3Q16798 604 aa21.98■■□□□ 1.11
CCM2-214ENST00000481194 KRI1Q8N9T8 703 aaKnown RBP21.98■■□□□ 1.11
CCM2-214ENST00000481194 PHLPP1O60346 1717 aa21.98■■□□□ 1.11
CCM2-214ENST00000481194 CCDC125Q86Z20 511 aa21.98■■□□□ 1.11
CCM2-214ENST00000481194 PUS7LQ9H0K6 701 aaKnown RBP21.97■■□□□ 1.11
CCM2-214ENST00000481194 GALNT17Q6IS24 598 aa21.97■■□□□ 1.11
CCM2-214ENST00000481194 LCORLQ8N3X6 602 aa21.97■■□□□ 1.11
CCM2-214ENST00000481194 NCOA5Q9HCD5 579 aaKnown RBP21.97■■□□□ 1.11
CCM2-214ENST00000481194 LTN1O94822 1766 aa21.97■■□□□ 1.11
CCM2-214ENST00000481194 PAXIP1Q6ZW49 1069 aaPredicted RBP21.97■■□□□ 1.11
CCM2-214ENST00000481194 DBNDD1Q9H9R9 158 aa21.97■■□□□ 1.11
CCM2-214ENST00000481194 CYP21A2P08686 494 aa21.96■■□□□ 1.11
CCM2-214ENST00000481194 CERKLQ49MI3 558 aaPredicted RBP21.96■■□□□ 1.11
CCM2-214ENST00000481194 FAM47AQ5JRC9 791 aa21.96■■□□□ 1.11
CCM2-214ENST00000481194 FKBP15Q5T1M5 1219 aa21.96■■□□□ 1.11
CCM2-214ENST00000481194 ADCY7P51828 1080 aa21.96■■□□□ 1.11
CCM2-214ENST00000481194 KRT79Q5XKE5 535 aa21.96■■□□□ 1.11
CCM2-214ENST00000481194 CHURC1Q8WUH1 139 aa21.96■■□□□ 1.11
CCM2-214ENST00000481194 TAOK3Q9H2K8 898 aa21.96■■□□□ 1.11
CCM2-214ENST00000481194 CD209Q9NNX6 404 aa21.96■■□□□ 1.11
CCM2-214ENST00000481194 DTHD1Q6ZMT9 781 aa21.96■■□□□ 1.11
CCM2-214ENST00000481194 CKAP2LQ8IYA6 745 aa21.95■■□□□ 1.11
CCM2-214ENST00000481194 ATF5Q9Y2D1 282 aaPredicted RBP21.95■■□□□ 1.11
CCM2-214ENST00000481194 GPR162Q16538 588 aa21.95■■□□□ 1.1
CCM2-214ENST00000481194 LRSAM1Q6UWE0 723 aa21.95■■□□□ 1.1
CCM2-214ENST00000481194 EXOC1Q9NV70 894 aa21.95■■□□□ 1.1
CCM2-214ENST00000481194 ZBED4O75132 1171 aa21.95■■□□□ 1.1
CCM2-214ENST00000481194 ZSCAN23Q3MJ62 389 aa21.95■■□□□ 1.1
CCM2-214ENST00000481194 PI16Q6UXB8 463 aa21.95■■□□□ 1.1
CCM2-214ENST00000481194 FANCBQ8NB91 859 aa21.95■■□□□ 1.1
CCM2-214ENST00000481194 WDR19Q8NEZ3 1342 aa21.95■■□□□ 1.1
CCM2-214ENST00000481194 FAM208AQ9UK61 1670 aaKnown RBP21.95■■□□□ 1.1
CCM2-214ENST00000481194 CIAPIN1Q6FI81 312 aa21.95■■□□□ 1.1
CCM2-214ENST00000481194 TBCAO75347 108 aaKnown RBP21.94■■□□□ 1.1
CCM2-214ENST00000481194 PARP4Q9UKK3 1724 aaKnown RBP21.94■■□□□ 1.1
CCM2-214ENST00000481194 CYP2E1P05181 493 aaPredicted RBP21.94■■□□□ 1.1
CCM2-214ENST00000481194 STYK1Q6J9G0 422 aa21.94■■□□□ 1.1
CCM2-214ENST00000481194 STRBPQ96SI9 672 aaKnown RBP21.94■■□□□ 1.1
CCM2-214ENST00000481194 GPSM2P81274 684 aa21.94■■□□□ 1.1
CCM2-214ENST00000481194 HSP90AA2PQ14568 343 aaPredicted RBP21.94■■□□□ 1.1
CCM2-214ENST00000481194 SLC10A5Q5PT55 438 aa21.94■■□□□ 1.1
CCM2-214ENST00000481194 DIS3L2Q8IYB7 885 aaKnown RBP21.94■■□□□ 1.1
CCM2-214ENST00000481194 ZNF397Q8NF99 534 aaPredicted RBP21.94■■□□□ 1.1
CCM2-214ENST00000481194 CLIP2Q9UDT6 1046 aa21.94■■□□□ 1.1
CCM2-214ENST00000481194 NECTIN1Q15223 517 aa21.94■■□□□ 1.1
CCM2-214ENST00000481194 CFAP100Q494V2 611 aa21.94■■□□□ 1.1
CCM2-214ENST00000481194 ANO1Q5XXA6 986 aa21.94■■□□□ 1.1
CCM2-214ENST00000481194 MTA3Q9BTC8 594 aa21.94■■□□□ 1.1
CCM2-214ENST00000481194 SETD1AO15047 1707 aaKnown RBP21.94■■□□□ 1.1
CCM2-214ENST00000481194 RFX5P48382 616 aaPredicted RBP21.93■■□□□ 1.1
CCM2-214ENST00000481194 ALX1Q15699 326 aa21.93■■□□□ 1.1
CCM2-214ENST00000481194 KRT40Q6A162 431 aa21.93■■□□□ 1.1
CCM2-214ENST00000481194 NAP1L1P55209 391 aaKnown RBP21.93■■□□□ 1.1
CCM2-214ENST00000481194 DYNLL1P63167 89 aaKnown RBP21.93■■□□□ 1.1
CCM2-214ENST00000481194 PNMA1Q8ND90 353 aa21.93■■□□□ 1.1
CCM2-214ENST00000481194 SAMM50Q9Y512 469 aa21.93■■□□□ 1.1
CCM2-214ENST00000481194 ZNF592Q92610 1267 aa21.93■■□□□ 1.1
CCM2-214ENST00000481194 TPCN1Q9ULQ1 816 aa21.93■■□□□ 1.1
CCM2-214ENST00000481194 ELP1O95163 1332 aa21.93■■□□□ 1.1
CCM2-214ENST00000481194 MARCKSP29966 332 aaPredicted RBP21.92■■□□□ 1.1
CCM2-214ENST00000481194 NONOQ15233 471 aaKnown RBP eCLIP21.92■■□□□ 1.1
CCM2-214ENST00000481194 ZNF609O15014 1411 aa21.92■■□□□ 1.1
CCM2-214ENST00000481194 CT47A1Q5JQC4 288 aaPredicted RBP21.92■■□□□ 1.1
CCM2-214ENST00000481194 RASEFQ8IZ41 740 aa21.92■■□□□ 1.1
CCM2-214ENST00000481194 DCPSQ96C86 337 aaKnown RBP21.92■■□□□ 1.1
CCM2-214ENST00000481194 MCM7P33993 719 aa21.92■■□□□ 1.1
CCM2-214ENST00000481194 RRAGBQ5VZM2 374 aa21.92■■□□□ 1.1
CCM2-214ENST00000481194 SPC24Q8NBT2 197 aa21.92■■□□□ 1.1
CCM2-214ENST00000481194 DNAI2Q9GZS0 605 aa21.92■■□□□ 1.1
CCM2-214ENST00000481194 TCP10L2B9ZVM9 353 aa21.91■■□□□ 1.1
CCM2-214ENST00000481194 MATR3P43243 847 aaKnown RBP eCLIP21.91■■□□□ 1.1
CCM2-214ENST00000481194 PLCD1P51178 756 aa21.91■■□□□ 1.1
CCM2-214ENST00000481194 ATP6V0A2Q9Y487 856 aa21.91■■□□□ 1.1
CCM2-214ENST00000481194 BRD1O95696 1058 aa21.91■■□□□ 1.1
CCM2-214ENST00000481194 PDIA3P30101 505 aaKnown RBP21.91■■□□□ 1.1
CCM2-214ENST00000481194 CUTAO60888 179 aa21.91■■□□□ 1.1
CCM2-214ENST00000481194 SLC15A2Q16348 729 aa21.91■■□□□ 1.1
CCM2-214ENST00000481194 DACT1Q9NYF0 836 aa21.91■■□□□ 1.1
CCM2-214ENST00000481194 CSADQ9Y600 493 aa21.91■■□□□ 1.1
CCM2-214ENST00000481194 A0A0U1RQG5 324 aaPredicted RBP21.91■■□□□ 1.1
CCM2-214ENST00000481194 hCG_1984214I3L0E3 225 aa21.91■■□□□ 1.1
CCM2-214ENST00000481194 ABCB5Q2M3G0 1257 aa21.91■■□□□ 1.1
CCM2-214ENST00000481194 ASPRV1Q53RT3 343 aa21.91■■□□□ 1.1
CCM2-214ENST00000481194 ZNF713Q8N859 430 aaPredicted RBP21.91■■□□□ 1.1
CCM2-214ENST00000481194 MYL10Q9BUA6 226 aa21.91■■□□□ 1.1
CCM2-214ENST00000481194 PEAK1Q9H792 1746 aa21.9■■□□□ 1.1
CCM2-214ENST00000481194 ICA1Q05084 483 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms