RNA–Protein interactions for RNA: ENST00000480784.1

NEB-211, Transcript of nebulin, humanhuman

TSL 4

Gene NEB, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-211ENST00000480784 PLCD1P51178 756 aa16.92■□□□□ 0.3
NEB-211ENST00000480784 ZMYM1Q5SVZ6 1142 aa16.92■□□□□ 0.3
NEB-211ENST00000480784 NOL9Q5SY16 702 aaKnown RBP16.92■□□□□ 0.3
NEB-211ENST00000480784 FOXP4Q8IVH2 680 aaPredicted RBP16.92■□□□□ 0.3
NEB-211ENST00000480784 OTUD5Q96G74 571 aa16.92■□□□□ 0.3
NEB-211ENST00000480784 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.92■□□□□ 0.3
NEB-211ENST00000480784 SLC4A4Q9Y6R1 1079 aa16.92■□□□□ 0.3
NEB-211ENST00000480784 TRIM6-TRIM34B2RNG4 842 aa16.91■□□□□ 0.3
NEB-211ENST00000480784 SMIM22K7EJ46 135 aa16.91■□□□□ 0.3
NEB-211ENST00000480784 ZBTB48P10074 688 aaPredicted RBP16.91■□□□□ 0.3
NEB-211ENST00000480784 SKAP1Q86WV1 359 aa16.91■□□□□ 0.3
NEB-211ENST00000480784 ERO1BQ86YB8 467 aa16.91■□□□□ 0.3
NEB-211ENST00000480784 SCYL3Q8IZE3 742 aa16.91■□□□□ 0.3
NEB-211ENST00000480784 RILPL2Q969X0 211 aa16.91■□□□□ 0.3
NEB-211ENST00000480784 MS4A4AQ96JQ5 239 aa16.91■□□□□ 0.3
NEB-211ENST00000480784 MCM9Q9NXL9 1143 aa16.91■□□□□ 0.3
NEB-211ENST00000480784 HERC5Q9UII4 1024 aaKnown RBP16.91■□□□□ 0.3
NEB-211ENST00000480784 THSD7BQ9C0I4 1608 aa16.91■□□□□ 0.3
NEB-211ENST00000480784 IRF6O14896 467 aa16.9■□□□□ 0.3
NEB-211ENST00000480784 GPAA1O43292 621 aa16.9■□□□□ 0.3
NEB-211ENST00000480784 CTNND1O60716 968 aaKnown RBP16.9■□□□□ 0.3
NEB-211ENST00000480784 POLR3DP05423 398 aaPredicted RBP16.9■□□□□ 0.3
NEB-211ENST00000480784 HLA-DOAP06340 250 aa16.9■□□□□ 0.3
NEB-211ENST00000480784 NEFLP07196 543 aa16.9■□□□□ 0.3
NEB-211ENST00000480784 TM4SF4P48230 202 aa16.9■□□□□ 0.3
NEB-211ENST00000480784 JAG1P78504 1218 aa16.9■□□□□ 0.3
NEB-211ENST00000480784 SHROOM1Q2M3G4 852 aaPredicted RBP16.9■□□□□ 0.3
NEB-211ENST00000480784 LRRFIP1Q32MZ4 808 aaKnown RBP16.9■□□□□ 0.3
NEB-211ENST00000480784 CCDC84Q86UT8 332 aaPredicted RBP16.9■□□□□ 0.3
NEB-211ENST00000480784 TSKSQ9UJT2 592 aa16.9■□□□□ 0.3
NEB-211ENST00000480784 CYP2D7A0A087X1C5 515 aa16.89■□□□□ 0.29
NEB-211ENST00000480784 GSG1L2A8MUP6 293 aa16.89■□□□□ 0.29
NEB-211ENST00000480784 GSPT1P15170 499 aaKnown RBP16.89■□□□□ 0.29
NEB-211ENST00000480784 PTPRAP18433 802 aa16.89■□□□□ 0.29
NEB-211ENST00000480784 CCDC129Q6ZRS4 1044 aa16.89■□□□□ 0.29
NEB-211ENST00000480784 CENPQQ7L2Z9 268 aaPredicted RBP16.89■□□□□ 0.29
NEB-211ENST00000480784 TTC6Q86TZ1 520 aa16.89■□□□□ 0.29
NEB-211ENST00000480784 CRACR2BQ8N4Y2 399 aaPredicted RBP16.89■□□□□ 0.29
NEB-211ENST00000480784 FAM227BQ96M60 508 aa16.89■□□□□ 0.29
NEB-211ENST00000480784 ATP8A2Q9NTI2 1148 aa16.89■□□□□ 0.29
NEB-211ENST00000480784 RNF186Q9NXI6 227 aa16.89■□□□□ 0.29
NEB-211ENST00000480784 TESPA1A2RU30 521 aaPredicted RBP16.88■□□□□ 0.29
NEB-211ENST00000480784 MANSC4A6NHS7 340 aaPredicted RBP16.88■□□□□ 0.29
NEB-211ENST00000480784 USP17L12C9JPN9 530 aa16.88■□□□□ 0.29
NEB-211ENST00000480784 USP17L21D6R901 530 aa16.88■□□□□ 0.29
NEB-211ENST00000480784 CAP2P40123 477 aa16.88■□□□□ 0.29
NEB-211ENST00000480784 PPATQ06203 517 aa16.88■□□□□ 0.29
NEB-211ENST00000480784 GABPAQ06546 454 aa16.88■□□□□ 0.29
NEB-211ENST00000480784 PPIL2Q13356 520 aa16.88■□□□□ 0.29
NEB-211ENST00000480784 REM2Q8IYK8 340 aaPredicted RBP16.88■□□□□ 0.29
NEB-211ENST00000480784 BRI3BPQ8WY22 251 aa16.88■□□□□ 0.29
NEB-211ENST00000480784 PTPN18Q99952 460 aa16.88■□□□□ 0.29
NEB-211ENST00000480784 BEGAINQ9BUH8 593 aa16.88■□□□□ 0.29
NEB-211ENST00000480784 EHD4Q9H223 541 aa16.88■□□□□ 0.29
NEB-211ENST00000480784 EPB41L4AQ9HCS5 686 aaPredicted RBP16.88■□□□□ 0.29
NEB-211ENST00000480784 SERPINB13Q9UIV8 391 aa16.88■□□□□ 0.29
NEB-211ENST00000480784 ZHX2Q9Y6X8 837 aa16.88■□□□□ 0.29
NEB-211ENST00000480784 A0A0D9SFI3 127 aa16.87■□□□□ 0.29
NEB-211ENST00000480784 IGF2BP3O00425 579 aaKnown RBP eCLIP16.87■□□□□ 0.29
NEB-211ENST00000480784 TRPA1O75762 1119 aa16.87■□□□□ 0.29
NEB-211ENST00000480784 HSPA8P11142 646 aaKnown RBP16.87■□□□□ 0.29
NEB-211ENST00000480784 SDSP20132 328 aa16.87■□□□□ 0.29
NEB-211ENST00000480784 TTC22Q5TAA0 569 aa16.87■□□□□ 0.29
NEB-211ENST00000480784 CTR9Q6PD62 1173 aa16.87■□□□□ 0.29
NEB-211ENST00000480784 DYNLL2Q96FJ2 89 aa16.87■□□□□ 0.29
NEB-211ENST00000480784 PICK1Q9NRD5 415 aa16.87■□□□□ 0.29
NEB-211ENST00000480784 OTOFQ9HC10 1997 aa16.87■□□□□ 0.29
NEB-211ENST00000480784 PATL2C9JE40 543 aaKnown RBP16.86■□□□□ 0.29
NEB-211ENST00000480784 FOXP2O15409 715 aa16.86■□□□□ 0.29
NEB-211ENST00000480784 GDF11O95390 407 aa16.86■□□□□ 0.29
NEB-211ENST00000480784 SHMT1P34896 483 aa16.86■□□□□ 0.29
NEB-211ENST00000480784 GTF2A2P52657 109 aa16.86■□□□□ 0.29
NEB-211ENST00000480784 SREBF2Q12772 1141 aa16.86■□□□□ 0.29
NEB-211ENST00000480784 NMIQ13287 307 aaPredicted RBP16.86■□□□□ 0.29
NEB-211ENST00000480784 C12orf60Q5U649 245 aa16.86■□□□□ 0.29
NEB-211ENST00000480784 TATDN1Q6P1N9 297 aa16.86■□□□□ 0.29
NEB-211ENST00000480784 IFNL1Q8IU54 200 aa16.86■□□□□ 0.29
NEB-211ENST00000480784 SLC44A5Q8NCS7 719 aa16.86■□□□□ 0.29
NEB-211ENST00000480784 CCDC136Q96JN2 1154 aa16.86■□□□□ 0.29
NEB-211ENST00000480784 TRIM34Q9BYJ4 488 aa16.86■□□□□ 0.29
NEB-211ENST00000480784 KCNH4Q9UQ05 1017 aa16.86■□□□□ 0.29
NEB-211ENST00000480784 AFG3L2Q9Y4W6 797 aa16.86■□□□□ 0.29
NEB-211ENST00000480784 AK9Q5TCS8 1911 aa16.86■□□□□ 0.29
NEB-211ENST00000480784 CCL15-CCL14A0A0B4J2E2 113 aa16.85■□□□□ 0.29
NEB-211ENST00000480784 CTCFP49711 727 aaPredicted RBP16.85■□□□□ 0.29
NEB-211ENST00000480784 LBX1P52954 281 aa16.85■□□□□ 0.29
NEB-211ENST00000480784 INHBEP58166 350 aa16.85■□□□□ 0.29
NEB-211ENST00000480784 CCL15Q16663 113 aa16.85■□□□□ 0.29
NEB-211ENST00000480784 R3HDMLQ9H3Y0 253 aa16.85■□□□□ 0.29
NEB-211ENST00000480784 HELLSQ9NRZ9 838 aa16.85■□□□□ 0.29
NEB-211ENST00000480784 SIPA1L1O43166 1804 aa16.84■□□□□ 0.29
NEB-211ENST00000480784 PCNTO95613 3336 aa16.84■□□□□ 0.29
NEB-211ENST00000480784 APPP05067 770 aa16.84■□□□□ 0.29
NEB-211ENST00000480784 GNAT2P19087 354 aa16.84■□□□□ 0.29
NEB-211ENST00000480784 SNAPC2Q13487 334 aa16.84■□□□□ 0.29
NEB-211ENST00000480784 MOGSQ13724 837 aa16.84■□□□□ 0.29
NEB-211ENST00000480784 MCMDC2Q4G0Z9 681 aa16.84■□□□□ 0.29
NEB-211ENST00000480784 VPS53Q5VIR6 699 aa16.84■□□□□ 0.29
NEB-211ENST00000480784 GIMAP6Q6P9H5 292 aa16.84■□□□□ 0.29
NEB-211ENST00000480784 ZNF589Q86UQ0 364 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms