RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 ECE1P42892 770 aa18.17■□□□□ 0.5
ABCF3-213ENST00000480539 MKRN3Q13064 507 aaKnown RBP18.17■□□□□ 0.5
ABCF3-213ENST00000480539 CRACR2BQ8N4Y2 399 aaPredicted RBP18.17■□□□□ 0.5
ABCF3-213ENST00000480539 TRIM34Q9BYJ4 488 aa18.17■□□□□ 0.5
ABCF3-213ENST00000480539 DNAJC18Q9H819 358 aa18.17■□□□□ 0.5
ABCF3-213ENST00000480539 CSADQ9Y600 493 aa18.17■□□□□ 0.5
ABCF3-213ENST00000480539 SNCAIPQ9Y6H5 919 aa18.17■□□□□ 0.5
ABCF3-213ENST00000480539 LAMB1P07942 1786 aa18.17■□□□□ 0.5
ABCF3-213ENST00000480539 DOCK1Q14185 1865 aa18.16■□□□□ 0.5
ABCF3-213ENST00000480539 FAM155AB1AL88 458 aaPredicted RBP18.16■□□□□ 0.5
ABCF3-213ENST00000480539 POLR3DP05423 398 aaPredicted RBP18.16■□□□□ 0.5
ABCF3-213ENST00000480539 MAP3K9P80192 1104 aa18.16■□□□□ 0.5
ABCF3-213ENST00000480539 ZNF589Q86UQ0 364 aaPredicted RBP18.16■□□□□ 0.5
ABCF3-213ENST00000480539 DDRGK1Q96HY6 314 aa18.16■□□□□ 0.5
ABCF3-213ENST00000480539 HELLSQ9NRZ9 838 aa18.16■□□□□ 0.5
ABCF3-213ENST00000480539 ATP8A2Q9NTI2 1148 aa18.16■□□□□ 0.5
ABCF3-213ENST00000480539 PI4KBQ9UBF8 816 aa18.16■□□□□ 0.5
ABCF3-213ENST00000480539 CYP2D7A0A087X1C5 515 aa18.15■□□□□ 0.5
ABCF3-213ENST00000480539 GSG1L2A8MUP6 293 aa18.15■□□□□ 0.5
ABCF3-213ENST00000480539 GNAT2P19087 354 aa18.15■□□□□ 0.5
ABCF3-213ENST00000480539 PLCD1P51178 756 aa18.15■□□□□ 0.5
ABCF3-213ENST00000480539 CWC27Q6UX04 472 aaKnown RBP18.15■□□□□ 0.5
ABCF3-213ENST00000480539 CNKSR2Q8WXI2 1034 aa18.15■□□□□ 0.5
ABCF3-213ENST00000480539 SLC10A4Q96EP9 437 aa18.15■□□□□ 0.5
ABCF3-213ENST00000480539 HERC5Q9UII4 1024 aaKnown RBP18.15■□□□□ 0.5
ABCF3-213ENST00000480539 ZNF112Q9UJU3 913 aa18.15■□□□□ 0.5
ABCF3-213ENST00000480539 PHF20L1A8MW92 1017 aa18.14■□□□□ 0.49
ABCF3-213ENST00000480539 HIP1O00291 1037 aa18.14■□□□□ 0.49
ABCF3-213ENST00000480539 APPP05067 770 aa18.14■□□□□ 0.49
ABCF3-213ENST00000480539 TDO2P48775 406 aa18.14■□□□□ 0.49
ABCF3-213ENST00000480539 MAP3K10Q02779 954 aa18.14■□□□□ 0.49
ABCF3-213ENST00000480539 MCMDC2Q4G0Z9 681 aa18.14■□□□□ 0.49
ABCF3-213ENST00000480539 TTC6Q86TZ1 520 aa18.14■□□□□ 0.49
ABCF3-213ENST00000480539 TICAM2Q86XR7 235 aa18.14■□□□□ 0.49
ABCF3-213ENST00000480539 CCDC102AQ96A19 550 aa18.14■□□□□ 0.49
ABCF3-213ENST00000480539 ZIC5Q96T25 663 aa18.14■□□□□ 0.49
ABCF3-213ENST00000480539 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.14■□□□□ 0.49
ABCF3-213ENST00000480539 CCDC171Q6TFL3 1326 aa18.14■□□□□ 0.49
ABCF3-213ENST00000480539 UNCXA6NJT0 531 aa18.13■□□□□ 0.49
ABCF3-213ENST00000480539 USP17L12C9JPN9 530 aa18.13■□□□□ 0.49
ABCF3-213ENST00000480539 USP17L21D6R901 530 aa18.13■□□□□ 0.49
ABCF3-213ENST00000480539 SMIM22K7EJ46 135 aa18.13■□□□□ 0.49
ABCF3-213ENST00000480539 FOXP2O15409 715 aa18.13■□□□□ 0.49
ABCF3-213ENST00000480539 TBC1D12O60347 775 aa18.13■□□□□ 0.49
ABCF3-213ENST00000480539 GJA5P36382 358 aa18.13■□□□□ 0.49
ABCF3-213ENST00000480539 NOL9Q5SY16 702 aaKnown RBP18.13■□□□□ 0.49
ABCF3-213ENST00000480539 VPS53Q5VIR6 699 aa18.13■□□□□ 0.49
ABCF3-213ENST00000480539 CTR9Q6PD62 1173 aa18.13■□□□□ 0.49
ABCF3-213ENST00000480539 AMOTL1Q8IY63 956 aa18.13■□□□□ 0.49
ABCF3-213ENST00000480539 OPTNQ96CV9 577 aa18.13■□□□□ 0.49
ABCF3-213ENST00000480539 OTUD5Q96G74 571 aa18.13■□□□□ 0.49
ABCF3-213ENST00000480539 WNK4Q96J92 1243 aa18.13■□□□□ 0.49
ABCF3-213ENST00000480539 EHD4Q9H223 541 aa18.13■□□□□ 0.49
ABCF3-213ENST00000480539 ARPP21Q9UBL0 812 aaPredicted RBP18.13■□□□□ 0.49
ABCF3-213ENST00000480539 SERPINB13Q9UIV8 391 aa18.13■□□□□ 0.49
ABCF3-213ENST00000480539 ATAD5Q96QE3 1844 aa18.13■□□□□ 0.49
ABCF3-213ENST00000480539 GDF11O95390 407 aa18.12■□□□□ 0.49
ABCF3-213ENST00000480539 NOGQ13253 232 aa18.12■□□□□ 0.49
ABCF3-213ENST00000480539 RRP1BQ14684 758 aaKnown RBP18.12■□□□□ 0.49
ABCF3-213ENST00000480539 SPRYD7Q5W111 196 aa18.12■□□□□ 0.49
ABCF3-213ENST00000480539 METTL16Q86W50 562 aaKnown RBP18.12■□□□□ 0.49
ABCF3-213ENST00000480539 SLC44A5Q8NCS7 719 aa18.12■□□□□ 0.49
ABCF3-213ENST00000480539 DYNLL2Q96FJ2 89 aa18.12■□□□□ 0.49
ABCF3-213ENST00000480539 PATL2C9JE40 543 aaKnown RBP18.11■□□□□ 0.49
ABCF3-213ENST00000480539 SHROOM1Q2M3G4 852 aaPredicted RBP18.11■□□□□ 0.49
ABCF3-213ENST00000480539 BMP2KLQ5H9B9 411 aa18.11■□□□□ 0.49
ABCF3-213ENST00000480539 GIMAP6Q6P9H5 292 aa18.11■□□□□ 0.49
ABCF3-213ENST00000480539 CCDC84Q86UT8 332 aaPredicted RBP18.11■□□□□ 0.49
ABCF3-213ENST00000480539 FOXP4Q8IVH2 680 aaPredicted RBP18.11■□□□□ 0.49
ABCF3-213ENST00000480539 SCYL3Q8IZE3 742 aa18.11■□□□□ 0.49
ABCF3-213ENST00000480539 IFNL3Q8IZI9 196 aa18.11■□□□□ 0.49
ABCF3-213ENST00000480539 NACAP1Q9BZK3 213 aa18.11■□□□□ 0.49
ABCF3-213ENST00000480539 NAPBQ9H115 298 aa18.11■□□□□ 0.49
ABCF3-213ENST00000480539 IL25Q9H293 177 aa18.11■□□□□ 0.49
ABCF3-213ENST00000480539 SPDYE5A6NIY4 337 aa18.1■□□□□ 0.49
ABCF3-213ENST00000480539 CTNND1O60716 968 aaKnown RBP18.1■□□□□ 0.49
ABCF3-213ENST00000480539 CHMLP26374 656 aa18.1■□□□□ 0.49
ABCF3-213ENST00000480539 SHMT1P34896 483 aa18.1■□□□□ 0.49
ABCF3-213ENST00000480539 KIF23Q02241 960 aaPredicted RBP18.1■□□□□ 0.49
ABCF3-213ENST00000480539 GABPAQ06546 454 aa18.1■□□□□ 0.49
ABCF3-213ENST00000480539 C12orf60Q5U649 245 aa18.1■□□□□ 0.49
ABCF3-213ENST00000480539 STK11IPQ8N1F8 1099 aa18.1■□□□□ 0.49
ABCF3-213ENST00000480539 PICK1Q9NRD5 415 aa18.1■□□□□ 0.49
ABCF3-213ENST00000480539 ROBO3Q96MS0 1386 aa18.09■□□□□ 0.49
ABCF3-213ENST00000480539 MINDY4BA8MYZ0 360 aa18.09■□□□□ 0.49
ABCF3-213ENST00000480539 ZBTB48P10074 688 aaPredicted RBP18.09■□□□□ 0.49
ABCF3-213ENST00000480539 CAP2P40123 477 aa18.09■□□□□ 0.49
ABCF3-213ENST00000480539 MFAP1P55081 439 aaKnown RBP18.09■□□□□ 0.49
ABCF3-213ENST00000480539 ERO1BQ86YB8 467 aa18.09■□□□□ 0.49
ABCF3-213ENST00000480539 JMYQ8N9B5 988 aa18.09■□□□□ 0.49
ABCF3-213ENST00000480539 RAD50Q92878 1312 aa18.08■□□□□ 0.49
ABCF3-213ENST00000480539 HSPD1P10809 573 aaKnown RBP18.08■□□□□ 0.48
ABCF3-213ENST00000480539 PTPRAP18433 802 aa18.08■□□□□ 0.48
ABCF3-213ENST00000480539 JAG1P78504 1218 aa18.08■□□□□ 0.48
ABCF3-213ENST00000480539 SBK1Q52WX2 424 aa18.08■□□□□ 0.48
ABCF3-213ENST00000480539 MAP2K2P36507 400 aa18.07■□□□□ 0.48
ABCF3-213ENST00000480539 PPIL2Q13356 520 aa18.07■□□□□ 0.48
ABCF3-213ENST00000480539 TATDN1Q6P1N9 297 aa18.07■□□□□ 0.48
ABCF3-213ENST00000480539 C16orf86Q6ZW13 317 aa18.07■□□□□ 0.48
ABCF3-213ENST00000480539 ZBTB21Q9ULJ3 1066 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms