RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 ZBTB43O43298 467 aa23.62■■□□□ 1.37
COL13A1-208ENST00000479733 CASP1P29466 404 aa23.62■■□□□ 1.37
COL13A1-208ENST00000479733 NR1I3Q14994 352 aa23.62■■□□□ 1.37
COL13A1-208ENST00000479733 PLEKHA4Q9H4M7 779 aa23.62■■□□□ 1.37
COL13A1-208ENST00000479733 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.62■■□□□ 1.37
COL13A1-208ENST00000479733 GOLGA8AA7E2F4 631 aa23.62■■□□□ 1.37
COL13A1-208ENST00000479733 MLKLQ8NB16 471 aa23.62■■□□□ 1.37
COL13A1-208ENST00000479733 RNF216Q9NWF9 866 aaPredicted RBP23.62■■□□□ 1.37
COL13A1-208ENST00000479733 ZNF330Q9Y3S2 320 aaPredicted RBP23.62■■□□□ 1.37
COL13A1-208ENST00000479733 FAM237AA0A1B0GTK4 181 aa23.61■■□□□ 1.37
COL13A1-208ENST00000479733 GUCY1A2P33402 732 aa23.61■■□□□ 1.37
COL13A1-208ENST00000479733 VSNL1P62760 191 aa23.61■■□□□ 1.37
COL13A1-208ENST00000479733 UBN2Q6ZU65 1347 aa23.61■■□□□ 1.37
COL13A1-208ENST00000479733 CMTR1Q8N1G2 835 aaKnown RBP23.61■■□□□ 1.37
COL13A1-208ENST00000479733 SLC35F6Q8N357 371 aa23.61■■□□□ 1.37
COL13A1-208ENST00000479733 ACRBPQ8NEB7 543 aa23.61■■□□□ 1.37
COL13A1-208ENST00000479733 PSD3Q9NYI0 1048 aa23.61■■□□□ 1.37
COL13A1-208ENST00000479733 C5P01031 1676 aa23.61■■□□□ 1.37
COL13A1-208ENST00000479733 NBPF26B4DH59 902 aa23.6■■□□□ 1.37
COL13A1-208ENST00000479733 SH2B2O14492 632 aaPredicted RBP23.6■■□□□ 1.37
COL13A1-208ENST00000479733 AFMP43652 599 aa23.6■■□□□ 1.37
COL13A1-208ENST00000479733 NBPF14Q5TI25 921 aa23.6■■□□□ 1.37
COL13A1-208ENST00000479733 NBPF10Q6P3W6 841 aaKnown RBP23.6■■□□□ 1.37
COL13A1-208ENST00000479733 NBPF15Q8N660 670 aa23.6■■□□□ 1.37
COL13A1-208ENST00000479733 ZFYP08048 801 aaPredicted RBP23.6■■□□□ 1.37
COL13A1-208ENST00000479733 TATP17735 454 aaPredicted RBP23.6■■□□□ 1.37
COL13A1-208ENST00000479733 CEP112Q8N8E3 955 aa23.6■■□□□ 1.37
COL13A1-208ENST00000479733 FER1L4A9Z1Z3 1794 aa23.6■■□□□ 1.37
COL13A1-208ENST00000479733 TOB1P50616 345 aaPredicted RBP23.6■■□□□ 1.37
COL13A1-208ENST00000479733 SMYD4Q8IYR2 804 aaPredicted RBP23.6■■□□□ 1.37
COL13A1-208ENST00000479733 RGS22Q8NE09 1264 aa23.6■■□□□ 1.37
COL13A1-208ENST00000479733 L1RE1Q9UN81 338 aa23.6■■□□□ 1.37
COL13A1-208ENST00000479733 CPDO75976 1380 aa23.59■■□□□ 1.37
COL13A1-208ENST00000479733 ERLIN1O75477 346 aa23.59■■□□□ 1.37
COL13A1-208ENST00000479733 A1BGP04217 495 aa23.59■■□□□ 1.37
COL13A1-208ENST00000479733 CSB-PGBD3P0DP91 1061 aa23.59■■□□□ 1.37
COL13A1-208ENST00000479733 MORC3Q14149 939 aa23.59■■□□□ 1.37
COL13A1-208ENST00000479733 CCDC57Q2TAC2 916 aa23.59■■□□□ 1.37
COL13A1-208ENST00000479733 NOSTRINQ8IVI9 506 aa23.59■■□□□ 1.37
COL13A1-208ENST00000479733 DACH1Q9UI36 760 aa23.59■■□□□ 1.37
COL13A1-208ENST00000479733 CTAGE9A4FU28 777 aa23.59■■□□□ 1.37
COL13A1-208ENST00000479733 CASP14P31944 242 aa23.59■■□□□ 1.37
COL13A1-208ENST00000479733 ATG3Q9NT62 314 aa23.59■■□□□ 1.37
COL13A1-208ENST00000479733 PCDHB6Q9Y5E3 794 aa23.59■■□□□ 1.37
COL13A1-208ENST00000479733 EIF3JO75822 258 aaKnown RBP23.58■■□□□ 1.37
COL13A1-208ENST00000479733 TAF7LQ5H9L4 462 aa23.58■■□□□ 1.37
COL13A1-208ENST00000479733 TMEM67Q5HYA8 995 aa23.58■■□□□ 1.37
COL13A1-208ENST00000479733 DIS3L2Q8IYB7 885 aaKnown RBP23.58■■□□□ 1.37
COL13A1-208ENST00000479733 IDH1O75874 414 aaKnown RBP23.58■■□□□ 1.36
COL13A1-208ENST00000479733 CABP4P57796 275 aa23.58■■□□□ 1.36
COL13A1-208ENST00000479733 NR5A1Q13285 461 aa23.58■■□□□ 1.36
COL13A1-208ENST00000479733 CASP8Q14790 479 aa23.58■■□□□ 1.36
COL13A1-208ENST00000479733 NTRK3Q16288 839 aa23.58■■□□□ 1.36
COL13A1-208ENST00000479733 HSP90B2PQ58FF3 399 aa23.58■■□□□ 1.36
COL13A1-208ENST00000479733 IFNL2Q8IZJ0 200 aa23.58■■□□□ 1.36
COL13A1-208ENST00000479733 AFDNP55196 1824 aaKnown RBP23.57■■□□□ 1.36
COL13A1-208ENST00000479733 A0A1B0GTH6 734 aa23.57■■□□□ 1.36
COL13A1-208ENST00000479733 SSRP1Q08945 709 aaKnown RBP23.57■■□□□ 1.36
COL13A1-208ENST00000479733 FAM217BQ9NTX9 383 aaPredicted RBP23.57■■□□□ 1.36
COL13A1-208ENST00000479733 PANX2Q96RD6 677 aa23.57■■□□□ 1.36
COL13A1-208ENST00000479733 NOA1Q8NC60 698 aaKnown RBP23.56■■□□□ 1.36
COL13A1-208ENST00000479733 HNRNPLLQ8WVV9 542 aaKnown RBP23.56■■□□□ 1.36
COL13A1-208ENST00000479733 FBXO2Q9UK22 296 aaPredicted RBP23.56■■□□□ 1.36
COL13A1-208ENST00000479733 NWD2Q9ULI1 1742 aa23.56■■□□□ 1.36
COL13A1-208ENST00000479733 CCT6AP40227 531 aaKnown RBP23.56■■□□□ 1.36
COL13A1-208ENST00000479733 SARSP49591 514 aaKnown RBP23.56■■□□□ 1.36
COL13A1-208ENST00000479733 PLCD1P51178 756 aa23.56■■□□□ 1.36
COL13A1-208ENST00000479733 ZKSCAN3Q9BRR0 538 aa23.56■■□□□ 1.36
COL13A1-208ENST00000479733 RAB21Q9UL25 225 aa23.56■■□□□ 1.36
COL13A1-208ENST00000479733 AKAP2Q9Y2D5 859 aa23.56■■□□□ 1.36
COL13A1-208ENST00000479733 CTAGE15A4D2H0 777 aa23.55■■□□□ 1.36
COL13A1-208ENST00000479733 CTAGE8P0CG41 777 aa23.55■■□□□ 1.36
COL13A1-208ENST00000479733 CDC25AP30304 524 aa23.55■■□□□ 1.36
COL13A1-208ENST00000479733 FXR1P51114 621 aaKnown RBP eCLIP23.55■■□□□ 1.36
COL13A1-208ENST00000479733 SAFBQ15424 915 aaKnown RBP eCLIP23.55■■□□□ 1.36
COL13A1-208ENST00000479733 NCAPH2Q6IBW4 605 aa23.55■■□□□ 1.36
COL13A1-208ENST00000479733 CTAGE6Q86UF2 777 aa23.55■■□□□ 1.36
COL13A1-208ENST00000479733 CTAGE4Q8IX94 777 aa23.55■■□□□ 1.36
COL13A1-208ENST00000479733 SLC12A7Q9Y666 1083 aa23.55■■□□□ 1.36
COL13A1-208ENST00000479733 CYP27B1O15528 508 aa23.55■■□□□ 1.36
COL13A1-208ENST00000479733 CD44P16070 742 aaKnown RBP23.55■■□□□ 1.36
COL13A1-208ENST00000479733 STAMQ92783 540 aa23.55■■□□□ 1.36
COL13A1-208ENST00000479733 CSRNP2Q9H175 543 aa23.55■■□□□ 1.36
COL13A1-208ENST00000479733 TOMM22Q9NS69 142 aa23.55■■□□□ 1.36
COL13A1-208ENST00000479733 IFIT3O14879 490 aaKnown RBP23.54■■□□□ 1.36
COL13A1-208ENST00000479733 PTPREP23469 700 aa23.54■■□□□ 1.36
COL13A1-208ENST00000479733 RRP12Q5JTH9 1297 aaKnown RBP23.54■■□□□ 1.36
COL13A1-208ENST00000479733 MSANTD4Q8NCY6 345 aa23.54■■□□□ 1.36
COL13A1-208ENST00000479733 GDAP1L1Q96MZ0 367 aa23.54■■□□□ 1.36
COL13A1-208ENST00000479733 LRRIQ3A6PVS8 624 aaPredicted RBP23.54■■□□□ 1.36
COL13A1-208ENST00000479733 IVLP07476 585 aa23.54■■□□□ 1.36
COL13A1-208ENST00000479733 USP5P45974 858 aa23.54■■□□□ 1.36
COL13A1-208ENST00000479733 IGDCC4Q8TDY8 1250 aa23.54■■□□□ 1.36
COL13A1-208ENST00000479733 LY9Q9HBG7 655 aa23.53■■□□□ 1.36
COL13A1-208ENST00000479733 POTEB2H3BUK9 544 aa23.53■■□□□ 1.36
COL13A1-208ENST00000479733 MCAMP43121 646 aa23.53■■□□□ 1.36
COL13A1-208ENST00000479733 AKAP17AQ02040 695 aaKnown RBP23.53■■□□□ 1.36
COL13A1-208ENST00000479733 CTDSPL2Q05D32 466 aa23.53■■□□□ 1.36
COL13A1-208ENST00000479733 APTXQ7Z2E3 356 aaKnown RBP23.53■■□□□ 1.36
COL13A1-208ENST00000479733 MFAP3LO75121 409 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms