RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 ZMYM6O95789 1325 aa16.21■□□□□ 0.18
COL20A1-206ENST00000479501 M0R2C6 588 aa16.2■□□□□ 0.18
COL20A1-206ENST00000479501 LETM2Q2VYF4 491 aa16.2■□□□□ 0.18
COL20A1-206ENST00000479501 MLKLQ8NB16 471 aa16.2■□□□□ 0.18
COL20A1-206ENST00000479501 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.2■□□□□ 0.18
COL20A1-206ENST00000479501 DEPDC5O75140 1603 aa16.2■□□□□ 0.18
COL20A1-206ENST00000479501 TRAF1Q13077 416 aa16.2■□□□□ 0.18
COL20A1-206ENST00000479501 FANCBQ8NB91 859 aa16.2■□□□□ 0.18
COL20A1-206ENST00000479501 VPS54Q9P1Q0 977 aa16.2■□□□□ 0.18
COL20A1-206ENST00000479501 CYLC1P35663 651 aaPredicted RBP16.2■□□□□ 0.18
COL20A1-206ENST00000479501 DNA2P51530 1060 aa16.2■□□□□ 0.18
COL20A1-206ENST00000479501 PCDHA7Q9UN72 937 aa16.2■□□□□ 0.18
COL20A1-206ENST00000479501 TERF1P54274 439 aa16.2■□□□□ 0.18
COL20A1-206ENST00000479501 SEPT7Q16181 437 aaKnown RBP16.2■□□□□ 0.18
COL20A1-206ENST00000479501 MICALCLQ6ZW33 695 aa16.2■□□□□ 0.18
COL20A1-206ENST00000479501 TFAP4Q01664 338 aa16.19■□□□□ 0.18
COL20A1-206ENST00000479501 EYA3Q99504 573 aa16.19■□□□□ 0.18
COL20A1-206ENST00000479501 TECPR2O15040 1411 aa16.19■□□□□ 0.18
COL20A1-206ENST00000479501 PFKFB1P16118 471 aa16.19■□□□□ 0.18
COL20A1-206ENST00000479501 WWC2Q6AWC2 1192 aa16.19■□□□□ 0.18
COL20A1-206ENST00000479501 SYT10Q6XYQ8 523 aa16.19■□□□□ 0.18
COL20A1-206ENST00000479501 NOSTRINQ8IVI9 506 aa16.19■□□□□ 0.18
COL20A1-206ENST00000479501 ADD2P35612 726 aa16.19■□□□□ 0.18
COL20A1-206ENST00000479501 CMTR1Q8N1G2 835 aaKnown RBP16.19■□□□□ 0.18
COL20A1-206ENST00000479501 OGFOD1Q8N543 542 aa16.19■□□□□ 0.18
COL20A1-206ENST00000479501 TTLL11Q8NHH1 800 aa16.19■□□□□ 0.18
COL20A1-206ENST00000479501 PUS7LQ9H0K6 701 aaKnown RBP16.19■□□□□ 0.18
COL20A1-206ENST00000479501 ZNF335Q9H4Z2 1342 aaPredicted RBP16.19■□□□□ 0.18
COL20A1-206ENST00000479501 ERVV-1B6SEH8 477 aa16.18■□□□□ 0.18
COL20A1-206ENST00000479501 FAM47AQ5JRC9 791 aa16.18■□□□□ 0.18
COL20A1-206ENST00000479501 ALS2CR12Q96Q35 445 aa16.18■□□□□ 0.18
COL20A1-206ENST00000479501 SEC31BQ9NQW1 1179 aa16.18■□□□□ 0.18
COL20A1-206ENST00000479501 PARP3Q9Y6F1 533 aa16.18■□□□□ 0.18
COL20A1-206ENST00000479501 TNKSO95271 1327 aa16.18■□□□□ 0.18
COL20A1-206ENST00000479501 UBE4AQ14139 1066 aa16.18■□□□□ 0.18
COL20A1-206ENST00000479501 CERS3Q8IU89 383 aa16.18■□□□□ 0.18
COL20A1-206ENST00000479501 EHBP1Q8NDI1 1231 aa16.18■□□□□ 0.18
COL20A1-206ENST00000479501 NFE2L3Q9Y4A8 694 aa16.18■□□□□ 0.18
COL20A1-206ENST00000479501 TBCAO75347 108 aaKnown RBP16.18■□□□□ 0.18
COL20A1-206ENST00000479501 TRMT1LQ7Z2T5 733 aaKnown RBP16.18■□□□□ 0.18
COL20A1-206ENST00000479501 SRRTQ9BXP5 876 aaKnown RBP16.18■□□□□ 0.18
COL20A1-206ENST00000479501 PREX1Q8TCU6 1659 aa16.18■□□□□ 0.18
COL20A1-206ENST00000479501 CMA1P23946 247 aa16.18■□□□□ 0.18
COL20A1-206ENST00000479501 PLCD1P51178 756 aa16.18■□□□□ 0.18
COL20A1-206ENST00000479501 UBXN1Q04323 297 aa16.18■□□□□ 0.18
COL20A1-206ENST00000479501 POSTNQ15063 836 aa16.18■□□□□ 0.18
COL20A1-206ENST00000479501 ZRSR2Q15696 482 aaKnown RBP16.18■□□□□ 0.18
COL20A1-206ENST00000479501 APOA5Q6Q788 366 aa16.18■□□□□ 0.18
COL20A1-206ENST00000479501 BAG1Q99933 345 aaPredicted RBP16.18■□□□□ 0.18
COL20A1-206ENST00000479501 BICDL2A1A5D9 508 aa16.17■□□□□ 0.18
COL20A1-206ENST00000479501 BTBD18B2RXH4 712 aa16.17■□□□□ 0.18
COL20A1-206ENST00000479501 JADE2Q9NQC1 790 aa16.17■□□□□ 0.18
COL20A1-206ENST00000479501 INCENPQ9NQS7 918 aa16.17■□□□□ 0.18
COL20A1-206ENST00000479501 RSPH14Q9UHP6 348 aa16.17■□□□□ 0.18
COL20A1-206ENST00000479501 MED23Q9ULK4 1368 aa16.17■□□□□ 0.18
COL20A1-206ENST00000479501 IVLP07476 585 aa16.17■□□□□ 0.18
COL20A1-206ENST00000479501 STXBP4Q6ZWJ1 553 aa16.17■□□□□ 0.18
COL20A1-206ENST00000479501 FERMT2Q96AC1 680 aa16.17■□□□□ 0.18
COL20A1-206ENST00000479501 GTF2A1P52655 376 aaPredicted RBP16.17■□□□□ 0.18
COL20A1-206ENST00000479501 MAPKAPK5Q8IW41 473 aa16.17■□□□□ 0.18
COL20A1-206ENST00000479501 USP21Q9UK80 565 aa16.17■□□□□ 0.18
COL20A1-206ENST00000479501 WWC3Q9ULE0 1092 aa16.17■□□□□ 0.18
COL20A1-206ENST00000479501 ATP10DQ9P241 1426 aa16.17■□□□□ 0.18
COL20A1-206ENST00000479501 MROH2AA6NES4 1674 aa16.17■□□□□ 0.18
COL20A1-206ENST00000479501 ZSCAN10Q96SZ4 725 aaPredicted RBP16.17■□□□□ 0.18
COL20A1-206ENST00000479501 MMRN2Q9H8L6 949 aa16.17■□□□□ 0.18
COL20A1-206ENST00000479501 RTEL1Q9NZ71 1219 aa16.17■□□□□ 0.18
COL20A1-206ENST00000479501 IMPACTQ9P2X3 320 aa16.17■□□□□ 0.18
COL20A1-206ENST00000479501 ARPP21Q9UBL0 812 aaPredicted RBP16.17■□□□□ 0.18
COL20A1-206ENST00000479501 MYO1BO43795 1136 aa16.16■□□□□ 0.18
COL20A1-206ENST00000479501 SMARCC2Q8TAQ2 1214 aa16.16■□□□□ 0.18
COL20A1-206ENST00000479501 TGFBRAP1Q8WUH2 860 aa16.16■□□□□ 0.18
COL20A1-206ENST00000479501 MRPL12P52815 198 aaKnown RBP16.16■□□□□ 0.18
COL20A1-206ENST00000479501 CETN1Q12798 172 aa16.16■□□□□ 0.18
COL20A1-206ENST00000479501 KARSQ15046 597 aaKnown RBP16.16■□□□□ 0.18
COL20A1-206ENST00000479501 CNGA4Q8IV77 575 aa16.16■□□□□ 0.18
COL20A1-206ENST00000479501 LUC7L2Q9Y383 392 aaKnown RBP16.16■□□□□ 0.18
COL20A1-206ENST00000479501 CARMIL3Q8ND23 1372 aa16.16■□□□□ 0.18
COL20A1-206ENST00000479501 SPDYE3A6NKU9 549 aa16.16■□□□□ 0.18
COL20A1-206ENST00000479501 AKR1B15C9JRZ8 316 aaPredicted RBP16.16■□□□□ 0.18
COL20A1-206ENST00000479501 ZNF500O60304 480 aaPredicted RBP16.16■□□□□ 0.18
COL20A1-206ENST00000479501 CAPN2P17655 700 aa16.16■□□□□ 0.18
COL20A1-206ENST00000479501 DYDC1Q8WWB3 177 aa16.16■□□□□ 0.18
COL20A1-206ENST00000479501 TTC14Q96N46 770 aa16.16■□□□□ 0.18
COL20A1-206ENST00000479501 SPAG5Q96R06 1193 aa16.16■□□□□ 0.18
COL20A1-206ENST00000479501 LZTFL1Q9NQ48 299 aa16.16■□□□□ 0.18
COL20A1-206ENST00000479501 RNF216Q9NWF9 866 aaPredicted RBP16.16■□□□□ 0.18
COL20A1-206ENST00000479501 HDAC9Q9UKV0 1011 aa16.16■□□□□ 0.18
COL20A1-206ENST00000479501 SAMM50Q9Y512 469 aa16.16■□□□□ 0.18
COL20A1-206ENST00000479501 CLIC4Q9Y696 253 aa16.16■□□□□ 0.18
COL20A1-206ENST00000479501 FRMPD1Q5SYB0 1578 aa16.16■□□□□ 0.18
COL20A1-206ENST00000479501 CCT6AP40227 531 aaKnown RBP16.15■□□□□ 0.18
COL20A1-206ENST00000479501 MATR3P43243 847 aaKnown RBP eCLIP16.15■□□□□ 0.18
COL20A1-206ENST00000479501 TICAM2Q86XR7 235 aa16.15■□□□□ 0.18
COL20A1-206ENST00000479501 MYRIPQ8NFW9 859 aa16.15■□□□□ 0.18
COL20A1-206ENST00000479501 GPCPD1Q9NPB8 672 aa16.15■□□□□ 0.18
COL20A1-206ENST00000479501 RCOR1Q9UKL0 485 aa16.15■□□□□ 0.18
COL20A1-206ENST00000479501 HLFQ16534 295 aa16.15■□□□□ 0.18
COL20A1-206ENST00000479501 USPL1Q5W0Q7 1092 aa16.15■□□□□ 0.18
COL20A1-206ENST00000479501 PPLO60437 1756 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms