RNA–Protein interactions for RNA: ENST00000479458.1

HMGCL-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-205ENST00000479458 TFCP2Q12800 502 aa9.49□□□□□ -0.89
HMGCL-205ENST00000479458 G3BP1Q13283 466 aaKnown RBP eCLIP9.49□□□□□ -0.89
HMGCL-205ENST00000479458 CFAP100Q494V2 611 aa9.49□□□□□ -0.89
HMGCL-205ENST00000479458 TJAP1Q5JTD0 557 aa9.49□□□□□ -0.89
HMGCL-205ENST00000479458 MFSD14BQ5SR56 506 aa9.49□□□□□ -0.89
HMGCL-205ENST00000479458 ZNF697Q5TEC3 545 aa9.49□□□□□ -0.89
HMGCL-205ENST00000479458 ZNF467Q7Z7K2 595 aaPredicted RBP9.49□□□□□ -0.89
HMGCL-205ENST00000479458 C7orf61Q8IZ16 206 aa9.49□□□□□ -0.89
HMGCL-205ENST00000479458 DEFB118Q96PH6 123 aa9.49□□□□□ -0.89
HMGCL-205ENST00000479458 NBPF3Q9H094 633 aa9.49□□□□□ -0.89
HMGCL-205ENST00000479458 ZMYND8Q9ULU4 1186 aaPredicted RBP9.49□□□□□ -0.89
HMGCL-205ENST00000479458 NOP58Q9Y2X3 529 aaKnown RBP9.49□□□□□ -0.89
HMGCL-205ENST00000479458 PCDHB13Q9Y5F0 798 aa9.49□□□□□ -0.89
HMGCL-205ENST00000479458 A0A1B0GUL7 405 aa9.48□□□□□ -0.89
HMGCL-205ENST00000479458 IRF6O14896 467 aa9.48□□□□□ -0.89
HMGCL-205ENST00000479458 PHKA1P46020 1223 aa9.48□□□□□ -0.89
HMGCL-205ENST00000479458 RRP1P56182 461 aaKnown RBP9.48□□□□□ -0.89
HMGCL-205ENST00000479458 PPATQ06203 517 aa9.48□□□□□ -0.89
HMGCL-205ENST00000479458 CHAF1AQ13111 956 aaPredicted RBP9.48□□□□□ -0.89
HMGCL-205ENST00000479458 CDX2Q99626 313 aaPredicted RBP9.48□□□□□ -0.89
HMGCL-205ENST00000479458 CHMP4BQ9H444 224 aaKnown RBP9.48□□□□□ -0.89
HMGCL-205ENST00000479458 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.48□□□□□ -0.89
HMGCL-205ENST00000479458 CPA4Q9UI42 421 aa9.48□□□□□ -0.89
HMGCL-205ENST00000479458 AKAP2Q9Y2D5 859 aa9.48□□□□□ -0.89
HMGCL-205ENST00000479458 SNCAIPQ9Y6H5 919 aa9.48□□□□□ -0.89
HMGCL-205ENST00000479458 CLRN2A0PK11 232 aa9.47□□□□□ -0.89
HMGCL-205ENST00000479458 F8W031 263 aaPredicted RBP9.47□□□□□ -0.89
HMGCL-205ENST00000479458 FRAT2O75474 233 aaPredicted RBP9.47□□□□□ -0.89
HMGCL-205ENST00000479458 SURF6O75683 361 aaKnown RBP9.47□□□□□ -0.89
HMGCL-205ENST00000479458 INHAP05111 366 aa9.47□□□□□ -0.89
HMGCL-205ENST00000479458 CLCN6P51797 869 aa9.47□□□□□ -0.89
HMGCL-205ENST00000479458 TIMM10P62072 90 aa9.47□□□□□ -0.89
HMGCL-205ENST00000479458 OS9Q13438 667 aaPredicted RBP9.47□□□□□ -0.89
HMGCL-205ENST00000479458 GRIK5Q16478 980 aa9.47□□□□□ -0.89
HMGCL-205ENST00000479458 CCDC102BQ68D86 513 aa9.47□□□□□ -0.89
HMGCL-205ENST00000479458 RPAP2Q8IXW5 612 aaPredicted RBP9.47□□□□□ -0.89
HMGCL-205ENST00000479458 TBC1D22AQ8WUA7 517 aa9.47□□□□□ -0.89
HMGCL-205ENST00000479458 XAGE2Q96GT9 111 aa9.47□□□□□ -0.89
HMGCL-205ENST00000479458 VEZTQ9HBM0 779 aa9.47□□□□□ -0.89
HMGCL-205ENST00000479458 PCDHB8Q9UN66 801 aa9.47□□□□□ -0.89
HMGCL-205ENST00000479458 KCNH4Q9UQ05 1017 aa9.47□□□□□ -0.89
HMGCL-205ENST00000479458 DDX60LQ5H9U9 1706 aaKnown RBP9.47□□□□□ -0.89
HMGCL-205ENST00000479458 SEMA3EO15041 775 aa9.46□□□□□ -0.9
HMGCL-205ENST00000479458 FLT3LGP49771 235 aa9.46□□□□□ -0.9
HMGCL-205ENST00000479458 MAP3K12Q12852 859 aa9.46□□□□□ -0.9
HMGCL-205ENST00000479458 SIRT2Q8IXJ6 389 aa9.46□□□□□ -0.9
HMGCL-205ENST00000479458 DIS3LQ8TF46 1054 aaKnown RBP9.46□□□□□ -0.9
HMGCL-205ENST00000479458 HOOK2Q96ED9 719 aa9.46□□□□□ -0.9
HMGCL-205ENST00000479458 MS4A3Q96HJ5 214 aa9.46□□□□□ -0.9
HMGCL-205ENST00000479458 GPR108Q9NPR9 543 aa9.46□□□□□ -0.9
HMGCL-205ENST00000479458 GNL3LQ9NVN8 582 aaKnown RBP9.46□□□□□ -0.9
HMGCL-205ENST00000479458 SERPINA10Q9UK55 444 aa9.46□□□□□ -0.9
HMGCL-205ENST00000479458 GABRQQ9UN88 632 aa9.46□□□□□ -0.9
HMGCL-205ENST00000479458 TTF2Q9UNY4 1162 aaKnown RBP9.46□□□□□ -0.9
HMGCL-205ENST00000479458 SUGT1Q9Y2Z0 365 aa9.46□□□□□ -0.9
HMGCL-205ENST00000479458 PCDHAC2Q9Y5I4 1007 aa9.46□□□□□ -0.9
HMGCL-205ENST00000479458 GTF3C3Q9Y5Q9 886 aa9.46□□□□□ -0.9
HMGCL-205ENST00000479458 TMEM265A0A087WTH1 108 aa9.45□□□□□ -0.9
HMGCL-205ENST00000479458 PDHXO00330 501 aa9.45□□□□□ -0.9
HMGCL-205ENST00000479458 HMMRO75330 724 aa9.45□□□□□ -0.9
HMGCL-205ENST00000479458 SYN1P17600 705 aa9.45□□□□□ -0.9
HMGCL-205ENST00000479458 TNNI2P48788 182 aa9.45□□□□□ -0.9
HMGCL-205ENST00000479458 RASGRF1Q13972 1273 aa9.45□□□□□ -0.9
HMGCL-205ENST00000479458 TNNI3KQ59H18 835 aa9.45□□□□□ -0.9
HMGCL-205ENST00000479458 WDR66Q8TBY9 1149 aa9.45□□□□□ -0.9
HMGCL-205ENST00000479458 NEUROD6Q96NK8 337 aa9.45□□□□□ -0.9
HMGCL-205ENST00000479458 PARK7Q99497 189 aaKnown RBP9.45□□□□□ -0.9
HMGCL-205ENST00000479458 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.45□□□□□ -0.9
HMGCL-205ENST00000479458 SEMA6BQ9H3T3 888 aa9.45□□□□□ -0.9
HMGCL-205ENST00000479458 C11orf49Q9H6J7 331 aa9.45□□□□□ -0.9
HMGCL-205ENST00000479458 ZNF70Q9UC06 446 aaPredicted RBP9.45□□□□□ -0.9
HMGCL-205ENST00000479458 RAPGEFL1Q9UHV5 662 aa9.45□□□□□ -0.9
HMGCL-205ENST00000479458 OGDHLQ9ULD0 1010 aa9.45□□□□□ -0.9
HMGCL-205ENST00000479458 DENND2AQ9ULE3 1009 aa9.45□□□□□ -0.9
HMGCL-205ENST00000479458 EXOC6BQ9Y2D4 811 aa9.45□□□□□ -0.9
HMGCL-205ENST00000479458 FPGT-TNNI3KV9GXZ4 949 aa9.45□□□□□ -0.9
HMGCL-205ENST00000479458 AOX1Q06278 1338 aa9.45□□□□□ -0.9
HMGCL-205ENST00000479458 CRKP46108 304 aa9.44□□□□□ -0.9
HMGCL-205ENST00000479458 HDLBPQ00341 1268 aaKnown RBP9.44□□□□□ -0.9
HMGCL-205ENST00000479458 MOGSQ13724 837 aa9.44□□□□□ -0.9
HMGCL-205ENST00000479458 HSP90AB4PQ58FF6 505 aa9.44□□□□□ -0.9
HMGCL-205ENST00000479458 ERC1Q8IUD2 1116 aa9.44□□□□□ -0.9
HMGCL-205ENST00000479458 DBNDD2Q9BQY9 259 aa9.44□□□□□ -0.9
HMGCL-205ENST00000479458 SLC45A1Q9Y2W3 748 aa9.44□□□□□ -0.9
HMGCL-205ENST00000479458 PDS5AQ29RF7 1337 aaKnown RBP9.44□□□□□ -0.9
HMGCL-205ENST00000479458 SALL1Q9NSC2 1324 aa9.44□□□□□ -0.9
HMGCL-205ENST00000479458 RPAP1Q9BWH6 1393 aaPredicted RBP9.43□□□□□ -0.9
HMGCL-205ENST00000479458 MAST3O60307 1309 aa9.43□□□□□ -0.9
HMGCL-205ENST00000479458 COL6A1P12109 1028 aa9.43□□□□□ -0.9
HMGCL-205ENST00000479458 ELNP15502 786 aa9.43□□□□□ -0.9
HMGCL-205ENST00000479458 ARID4AP29374 1257 aaPredicted RBP9.43□□□□□ -0.9
HMGCL-205ENST00000479458 PRDX5P30044 214 aa9.43□□□□□ -0.9
HMGCL-205ENST00000479458 RBM5P52756 815 aaKnown RBP eCLIP9.43□□□□□ -0.9
HMGCL-205ENST00000479458 GORABQ5T7V8 394 aa9.43□□□□□ -0.9
HMGCL-205ENST00000479458 EAF2Q96CJ1 260 aaPredicted RBP9.43□□□□□ -0.9
HMGCL-205ENST00000479458 FAM161BQ96MY7 647 aa9.43□□□□□ -0.9
HMGCL-205ENST00000479458 DBNLQ9UJU6 430 aaKnown RBP9.43□□□□□ -0.9
HMGCL-205ENST00000479458 BDP1A6H8Y1 2624 aa9.43□□□□□ -0.9
HMGCL-205ENST00000479458 DNAH12Q6ZR08 3092 aa9.42□□□□□ -0.9
HMGCL-205ENST00000479458 PFASO15067 1338 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms