RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 NFIAQ12857 509 aa17.97■□□□□ 0.47
USP11-207ENST00000478596 SHHQ15465 462 aa17.97■□□□□ 0.47
USP11-207ENST00000478596 DOCK3Q8IZD9 2030 aa17.97■□□□□ 0.47
USP11-207ENST00000478596 SYNGAP1Q96PV0 1343 aa17.97■□□□□ 0.47
USP11-207ENST00000478596 FRAT2O75474 233 aaPredicted RBP17.96■□□□□ 0.47
USP11-207ENST00000478596 PANK1Q8TE04 598 aa17.96■□□□□ 0.47
USP11-207ENST00000478596 FAM198AQ9UFP1 575 aa17.96■□□□□ 0.47
USP11-207ENST00000478596 ARIH1Q9Y4X5 557 aaPredicted RBP17.96■□□□□ 0.47
USP11-207ENST00000478596 TRIM75PA6NK02 468 aa17.95■□□□□ 0.46
USP11-207ENST00000478596 MAP3K10Q02779 954 aa17.95■□□□□ 0.46
USP11-207ENST00000478596 TREML2Q5T2D2 321 aa17.95■□□□□ 0.46
USP11-207ENST00000478596 CDC42EP5Q6NZY7 148 aa17.95■□□□□ 0.46
USP11-207ENST00000478596 TMEM57Q8N5G2 664 aa17.95■□□□□ 0.46
USP11-207ENST00000478596 USP38Q8NB14 1042 aa17.95■□□□□ 0.46
USP11-207ENST00000478596 PRKAG2Q9UGJ0 569 aa17.95■□□□□ 0.46
USP11-207ENST00000478596 BDP1A6H8Y1 2624 aa17.95■□□□□ 0.46
USP11-207ENST00000478596 IRX6P78412 446 aaPredicted RBP17.94■□□□□ 0.46
USP11-207ENST00000478596 CAVIN4Q5BKX8 364 aa17.94■□□□□ 0.46
USP11-207ENST00000478596 EPHA10Q5JZY3 1008 aa17.94■□□□□ 0.46
USP11-207ENST00000478596 C9orf50Q5SZB4 431 aa17.94■□□□□ 0.46
USP11-207ENST00000478596 TRMT44Q8IYL2 757 aaKnown RBP17.94■□□□□ 0.46
USP11-207ENST00000478596 PROCA1Q8NCQ7 364 aaPredicted RBP17.94■□□□□ 0.46
USP11-207ENST00000478596 CTNND1O60716 968 aaKnown RBP17.93■□□□□ 0.46
USP11-207ENST00000478596 CYP2B6P20813 491 aa17.93■□□□□ 0.46
USP11-207ENST00000478596 CACNB2Q08289 660 aaPredicted RBP17.93■□□□□ 0.46
USP11-207ENST00000478596 ATXN2LQ8WWM7 1075 aaKnown RBP17.93■□□□□ 0.46
USP11-207ENST00000478596 C9orf78Q9NZ63 289 aaPredicted RBP17.93■□□□□ 0.46
USP11-207ENST00000478596 COG6Q9Y2V7 657 aa17.93■□□□□ 0.46
USP11-207ENST00000478596 DAGLAQ9Y4D2 1042 aa17.93■□□□□ 0.46
USP11-207ENST00000478596 MROH5Q6ZUA9 1318 aa17.93■□□□□ 0.46
USP11-207ENST00000478596 MAST2Q6P0Q8 1798 aa17.92■□□□□ 0.46
USP11-207ENST00000478596 ALDH1L1O75891 902 aa17.92■□□□□ 0.46
USP11-207ENST00000478596 RLBP1P12271 317 aa17.92■□□□□ 0.46
USP11-207ENST00000478596 PDE3AQ14432 1141 aa17.92■□□□□ 0.46
USP11-207ENST00000478596 BEND3Q5T5X7 828 aa17.92■□□□□ 0.46
USP11-207ENST00000478596 C20orf194Q5TEA3 1177 aa17.92■□□□□ 0.46
USP11-207ENST00000478596 ZFPM1Q8IX07 1006 aa17.92■□□□□ 0.46
USP11-207ENST00000478596 SOCS4Q8WXH5 440 aa17.92■□□□□ 0.46
USP11-207ENST00000478596 SENP6Q9GZR1 1112 aaPredicted RBP17.92■□□□□ 0.46
USP11-207ENST00000478596 MORF4L1Q9UBU8 362 aa17.92■□□□□ 0.46
USP11-207ENST00000478596 ZKSCAN1P17029 563 aaPredicted RBP17.91■□□□□ 0.46
USP11-207ENST00000478596 MVPQ14764 893 aaKnown RBP17.91■□□□□ 0.46
USP11-207ENST00000478596 NUDT12Q9BQG2 462 aa17.91■□□□□ 0.46
USP11-207ENST00000478596 PUS3Q9BZE2 481 aaKnown RBP17.91■□□□□ 0.46
USP11-207ENST00000478596 LRRFIP2Q9Y608 721 aaKnown RBP17.91■□□□□ 0.46
USP11-207ENST00000478596 PTPRFP10586 1907 aa17.91■□□□□ 0.46
USP11-207ENST00000478596 CCND3P30281 292 aaPredicted RBP17.9■□□□□ 0.46
USP11-207ENST00000478596 PABPC4Q13310 644 aaKnown RBP eCLIP17.9■□□□□ 0.46
USP11-207ENST00000478596 ADAMTS19Q8TE59 1207 aa17.9■□□□□ 0.46
USP11-207ENST00000478596 DDX19BQ9UMR2 479 aa17.9■□□□□ 0.46
USP11-207ENST00000478596 PLXNB2O15031 1838 aa17.9■□□□□ 0.46
USP11-207ENST00000478596 LTBP2Q14767 1821 aa17.89■□□□□ 0.45
USP11-207ENST00000478596 UBTFL1P0CB47 393 aaPredicted RBP17.89■□□□□ 0.45
USP11-207ENST00000478596 USP6NLQ92738 828 aa17.89■□□□□ 0.45
USP11-207ENST00000478596 ASB2Q96Q27 587 aa17.89■□□□□ 0.45
USP11-207ENST00000478596 C1QTNF1Q9BXJ1 281 aa17.89■□□□□ 0.45
USP11-207ENST00000478596 ASCC2Q9H1I8 757 aaPredicted RBP17.89■□□□□ 0.45
USP11-207ENST00000478596 CHMP4BQ9H444 224 aaKnown RBP17.89■□□□□ 0.45
USP11-207ENST00000478596 USP40Q9NVE5 1235 aa17.89■□□□□ 0.45
USP11-207ENST00000478596 GRM8O00222 908 aa17.88■□□□□ 0.45
USP11-207ENST00000478596 ENTPD3O75355 529 aa17.88■□□□□ 0.45
USP11-207ENST00000478596 RTP1P59025 263 aa17.88■□□□□ 0.45
USP11-207ENST00000478596 GRIN2CQ14957 1233 aa17.88■□□□□ 0.45
USP11-207ENST00000478596 DIXDC1Q155Q3 683 aa17.88■□□□□ 0.45
USP11-207ENST00000478596 WDR66Q8TBY9 1149 aa17.88■□□□□ 0.45
USP11-207ENST00000478596 CRBNQ96SW2 442 aa17.88■□□□□ 0.45
USP11-207ENST00000478596 NCOR1O75376 2440 aa17.88■□□□□ 0.45
USP11-207ENST00000478596 PHIPQ8WWQ0 1821 aa17.87■□□□□ 0.45
USP11-207ENST00000478596 GNAI3P08754 354 aa17.87■□□□□ 0.45
USP11-207ENST00000478596 ATN1P54259 1190 aaPredicted RBP17.87■□□□□ 0.45
USP11-207ENST00000478596 SH3BP5LQ7L8J4 393 aa17.87■□□□□ 0.45
USP11-207ENST00000478596 VGLL2Q8N8G2 317 aa17.87■□□□□ 0.45
USP11-207ENST00000478596 UHRF1Q96T88 793 aaPredicted RBP17.87■□□□□ 0.45
USP11-207ENST00000478596 IDI2Q9BXS1 227 aa17.87■□□□□ 0.45
USP11-207ENST00000478596 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.87■□□□□ 0.45
USP11-207ENST00000478596 PIEZO1Q92508 2521 aa17.86■□□□□ 0.45
USP11-207ENST00000478596 DNM1LO00429 736 aa17.86■□□□□ 0.45
USP11-207ENST00000478596 RGS3P49796 1198 aa17.86■□□□□ 0.45
USP11-207ENST00000478596 CCDC84Q86UT8 332 aaPredicted RBP17.86■□□□□ 0.45
USP11-207ENST00000478596 BADQ92934 168 aa17.86■□□□□ 0.45
USP11-207ENST00000478596 HDAC5Q9UQL6 1122 aa17.86■□□□□ 0.45
USP11-207ENST00000478596 PDE8BO95263 885 aa17.85■□□□□ 0.45
USP11-207ENST00000478596 RGS2P41220 211 aa17.85■□□□□ 0.45
USP11-207ENST00000478596 SPP2Q13103 211 aa17.85■□□□□ 0.45
USP11-207ENST00000478596 DOCK1Q14185 1865 aa17.85■□□□□ 0.45
USP11-207ENST00000478596 RFX7Q2KHR2 1363 aa17.85■□□□□ 0.45
USP11-207ENST00000478596 ZNF280CQ8ND82 737 aa17.85■□□□□ 0.45
USP11-207ENST00000478596 MEIS3Q99687 375 aa17.85■□□□□ 0.45
USP11-207ENST00000478596 TBC1D2Q9BYX2 928 aa17.85■□□□□ 0.45
USP11-207ENST00000478596 THEGQ9P2T0 379 aa17.85■□□□□ 0.45
USP11-207ENST00000478596 LOC285556D6RIA3 1793 aa17.84■□□□□ 0.45
USP11-207ENST00000478596 MSCO60682 206 aa17.84■□□□□ 0.45
USP11-207ENST00000478596 MAPK4P31152 587 aa17.84■□□□□ 0.45
USP11-207ENST00000478596 HMGCS2P54868 508 aa17.84■□□□□ 0.45
USP11-207ENST00000478596 MRPS5P82675 430 aaKnown RBP17.84■□□□□ 0.45
USP11-207ENST00000478596 CCL14Q16627 93 aa17.84■□□□□ 0.45
USP11-207ENST00000478596 METTL24Q5JXM2 366 aa17.84■□□□□ 0.45
USP11-207ENST00000478596 MORN1Q5T089 497 aa17.84■□□□□ 0.45
USP11-207ENST00000478596 GPRC5AQ8NFJ5 357 aa17.84■□□□□ 0.45
USP11-207ENST00000478596 LPAR1Q92633 364 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms