RNA–Protein interactions for RNA: ENST00000478369.5

VANGL1-206, Transcript of VANGL planar cell polarity protein 1, humanhuman

TSL 3

Gene VANGL1, Length 363 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-206ENST00000478369 PSMC4P43686 418 aa13.25□□□□□ -0.29
VANGL1-206ENST00000478369 PRPF38BQ5VTL8 546 aaKnown RBP13.25□□□□□ -0.29
VANGL1-206ENST00000478369 METTL16Q86W50 562 aaKnown RBP13.25□□□□□ -0.29
VANGL1-206ENST00000478369 FOXP4Q8IVH2 680 aaPredicted RBP13.25□□□□□ -0.29
VANGL1-206ENST00000478369 PROCA1Q8NCQ7 364 aaPredicted RBP13.25□□□□□ -0.29
VANGL1-206ENST00000478369 ARHGAP39Q9C0H5 1083 aa13.25□□□□□ -0.29
VANGL1-206ENST00000478369 CCDC8Q9H0W5 538 aaPredicted RBP13.25□□□□□ -0.29
VANGL1-206ENST00000478369 GINM1Q9NU53 330 aa13.25□□□□□ -0.29
VANGL1-206ENST00000478369 TLR7Q9NYK1 1049 aaKnown RBP13.25□□□□□ -0.29
VANGL1-206ENST00000478369 POTEFA5A3E0 1075 aa13.24□□□□□ -0.29
VANGL1-206ENST00000478369 GADL1Q6ZQY3 521 aa13.24□□□□□ -0.29
VANGL1-206ENST00000478369 AS3MTQ9HBK9 375 aa13.24□□□□□ -0.29
VANGL1-206ENST00000478369 PIH1D3Q9NQM4 214 aaKnown RBP13.24□□□□□ -0.29
VANGL1-206ENST00000478369 SRRDQ9UH36 339 aa13.24□□□□□ -0.29
VANGL1-206ENST00000478369 PNMA3Q9UL41 463 aa13.24□□□□□ -0.29
VANGL1-206ENST00000478369 AGTPBP1Q9UPW5 1226 aa13.24□□□□□ -0.29
VANGL1-206ENST00000478369 EXOC6BQ9Y2D4 811 aa13.24□□□□□ -0.29
VANGL1-206ENST00000478369 PHIPQ8WWQ0 1821 aa13.23□□□□□ -0.29
VANGL1-206ENST00000478369 FLT1P17948 1338 aa13.23□□□□□ -0.29
VANGL1-206ENST00000478369 BRCA2P51587 3418 aa13.23□□□□□ -0.29
VANGL1-206ENST00000478369 TRIM75PA6NK02 468 aa13.23□□□□□ -0.29
VANGL1-206ENST00000478369 USP17L5A8MUK1 530 aa13.23□□□□□ -0.29
VANGL1-206ENST00000478369 FMNL1O95466 1100 aaPredicted RBP13.23□□□□□ -0.29
VANGL1-206ENST00000478369 CYP2C8P10632 490 aa13.23□□□□□ -0.29
VANGL1-206ENST00000478369 FCGRTP55899 365 aa13.23□□□□□ -0.29
VANGL1-206ENST00000478369 MAP3K12Q12852 859 aa13.23□□□□□ -0.29
VANGL1-206ENST00000478369 TTF1Q15361 905 aaPredicted RBP13.23□□□□□ -0.29
VANGL1-206ENST00000478369 ADGRA1Q86SQ6 560 aa13.23□□□□□ -0.29
VANGL1-206ENST00000478369 AACSQ86V21 672 aa13.23□□□□□ -0.29
VANGL1-206ENST00000478369 ZNF280CQ8ND82 737 aa13.23□□□□□ -0.29
VANGL1-206ENST00000478369 RHPN1Q8TCX5 695 aa13.23□□□□□ -0.29
VANGL1-206ENST00000478369 TGFBRAP1Q8WUH2 860 aa13.23□□□□□ -0.29
VANGL1-206ENST00000478369 KIF1BPQ96EK5 621 aa13.23□□□□□ -0.29
VANGL1-206ENST00000478369 TRIM47Q96LD4 638 aa13.23□□□□□ -0.29
VANGL1-206ENST00000478369 ZBTB40Q9NUA8 1239 aa13.23□□□□□ -0.29
VANGL1-206ENST00000478369 PTPRFP10586 1907 aa13.22□□□□□ -0.29
VANGL1-206ENST00000478369 RAB11FIP3O75154 756 aa13.22□□□□□ -0.29
VANGL1-206ENST00000478369 IDH1O75874 414 aaKnown RBP13.22□□□□□ -0.29
VANGL1-206ENST00000478369 HLA-DOAP06340 250 aa13.22□□□□□ -0.29
VANGL1-206ENST00000478369 ASNSP08243 561 aa13.22□□□□□ -0.29
VANGL1-206ENST00000478369 SLURP2P0DP57 97 aa13.22□□□□□ -0.29
VANGL1-206ENST00000478369 OSBPP22059 807 aa13.22□□□□□ -0.29
VANGL1-206ENST00000478369 CYP7A1P22680 504 aa13.22□□□□□ -0.29
VANGL1-206ENST00000478369 PABPC4Q13310 644 aaKnown RBP eCLIP13.22□□□□□ -0.29
VANGL1-206ENST00000478369 SH3D19Q5HYK7 790 aa13.22□□□□□ -0.29
VANGL1-206ENST00000478369 MAPKAPK5Q8IW41 473 aa13.22□□□□□ -0.29
VANGL1-206ENST00000478369 CLASRPQ8N2M8 674 aaKnown RBP13.22□□□□□ -0.29
VANGL1-206ENST00000478369 RAET1EQ8TD07 263 aa13.22□□□□□ -0.29
VANGL1-206ENST00000478369 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.22□□□□□ -0.29
VANGL1-206ENST00000478369 TRIM34Q9BYJ4 488 aa13.22□□□□□ -0.29
VANGL1-206ENST00000478369 MKI67P46013 3256 aaKnown RBP13.21□□□□□ -0.29
VANGL1-206ENST00000478369 FOCADQ5VW36 1801 aa13.21□□□□□ -0.29
VANGL1-206ENST00000478369 FAM196BA6NMK8 535 aa13.21□□□□□ -0.29
VANGL1-206ENST00000478369 CTGFP29279 349 aa13.21□□□□□ -0.29
VANGL1-206ENST00000478369 SPP2Q13103 211 aa13.21□□□□□ -0.29
VANGL1-206ENST00000478369 SLC4A8Q2Y0W8 1093 aa13.21□□□□□ -0.29
VANGL1-206ENST00000478369 CRACR2BQ8N4Y2 399 aaPredicted RBP13.21□□□□□ -0.29
VANGL1-206ENST00000478369 SMCR8Q8TEV9 937 aaPredicted RBP13.21□□□□□ -0.29
VANGL1-206ENST00000478369 WDR18Q9BV38 432 aa13.21□□□□□ -0.29
VANGL1-206ENST00000478369 COG6Q9Y2V7 657 aa13.21□□□□□ -0.29
VANGL1-206ENST00000478369 KIAA0100Q14667 2235 aaKnown RBP13.2□□□□□ -0.3
VANGL1-206ENST00000478369 MYPNQ86TC9 1320 aa13.2□□□□□ -0.3
VANGL1-206ENST00000478369 EN2P19622 333 aaPredicted RBP13.2□□□□□ -0.3
VANGL1-206ENST00000478369 GRK4P32298 578 aa13.2□□□□□ -0.3
VANGL1-206ENST00000478369 GCLCP48506 637 aaPredicted RBP13.2□□□□□ -0.3
VANGL1-206ENST00000478369 PDE3AQ14432 1141 aa13.2□□□□□ -0.3
VANGL1-206ENST00000478369 MAGEB6Q8N7X4 407 aa13.2□□□□□ -0.3
VANGL1-206ENST00000478369 SH3TC2Q8TF17 1288 aa13.2□□□□□ -0.3
VANGL1-206ENST00000478369 IL1RAPL2Q9NP60 686 aa13.2□□□□□ -0.3
VANGL1-206ENST00000478369 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.2□□□□□ -0.3
VANGL1-206ENST00000478369 PALD1Q9ULE6 856 aa13.2□□□□□ -0.3
VANGL1-206ENST00000478369 ZSWIM8A7E2V4 1837 aa13.19□□□□□ -0.3
VANGL1-206ENST00000478369 ATAD5Q96QE3 1844 aa13.19□□□□□ -0.3
VANGL1-206ENST00000478369 C19orf81C9J6K1 198 aa13.19□□□□□ -0.3
VANGL1-206ENST00000478369 IFIT2P09913 472 aaKnown RBP13.19□□□□□ -0.3
VANGL1-206ENST00000478369 CAPN2P17655 700 aa13.19□□□□□ -0.3
VANGL1-206ENST00000478369 USP5P45974 858 aa13.19□□□□□ -0.3
VANGL1-206ENST00000478369 HMGCS2P54868 508 aa13.19□□□□□ -0.3
VANGL1-206ENST00000478369 BACE1P56817 501 aa13.19□□□□□ -0.3
VANGL1-206ENST00000478369 DYNLL1P63167 89 aaKnown RBP13.19□□□□□ -0.3
VANGL1-206ENST00000478369 RRP1BQ14684 758 aaKnown RBP13.19□□□□□ -0.3
VANGL1-206ENST00000478369 FAM110CQ1W6H9 321 aa13.19□□□□□ -0.3
VANGL1-206ENST00000478369 TREML2Q5T2D2 321 aa13.19□□□□□ -0.3
VANGL1-206ENST00000478369 CCDC84Q86UT8 332 aaPredicted RBP13.19□□□□□ -0.3
VANGL1-206ENST00000478369 SIRT2Q8IXJ6 389 aa13.19□□□□□ -0.3
VANGL1-206ENST00000478369 SLAIN1Q8ND83 568 aa13.19□□□□□ -0.3
VANGL1-206ENST00000478369 NKX2-3Q8TAU0 364 aa13.19□□□□□ -0.3
VANGL1-206ENST00000478369 EHD4Q9H223 541 aa13.19□□□□□ -0.3
VANGL1-206ENST00000478369 ANTXR1Q9H6X2 564 aa13.19□□□□□ -0.3
VANGL1-206ENST00000478369 DNAJC18Q9H819 358 aa13.19□□□□□ -0.3
VANGL1-206ENST00000478369 LOC285556D6RIA3 1793 aa13.19□□□□□ -0.3
VANGL1-206ENST00000478369 CDK5RAP2Q96SN8 1893 aa13.19□□□□□ -0.3
VANGL1-206ENST00000478369 MYO5AQ9Y4I1 1855 aaKnown RBP13.19□□□□□ -0.3
VANGL1-206ENST00000478369 SIPA1L1O43166 1804 aa13.18□□□□□ -0.3
VANGL1-206ENST00000478369 SLC34A2O95436 690 aa13.18□□□□□ -0.3
VANGL1-206ENST00000478369 UBXN2AP68543 259 aa13.18□□□□□ -0.3
VANGL1-206ENST00000478369 PRKCZQ05513 592 aa13.18□□□□□ -0.3
VANGL1-206ENST00000478369 IRF5Q13568 498 aa13.18□□□□□ -0.3
VANGL1-206ENST00000478369 TTC6Q86TZ1 520 aa13.18□□□□□ -0.3
VANGL1-206ENST00000478369 TMOD4Q9NZQ9 345 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms