RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-222	ENST00000478279	ZNF280C	Q8ND82	737 aa		13.2	□□□□□ -0.3
APTX-222	ENST00000478279	FBXO3	Q9UK99	471 aa		13.2	□□□□□ -0.3
APTX-222	ENST00000478279	PFAS	O15067	1338 aa		13.19	□□□□□ -0.3
APTX-222	ENST00000478279	POTEB2	H3BUK9	544 aa		13.19	□□□□□ -0.3
APTX-222	ENST00000478279	PHKA1	P46020	1223 aa		13.19	□□□□□ -0.3
APTX-222	ENST00000478279	FAM109B	Q6ICB4	259 aa	Predicted RBP	13.19	□□□□□ -0.3
APTX-222	ENST00000478279	DZIP1	Q86YF9	867 aa	Known RBP	13.19	□□□□□ -0.3
APTX-222	ENST00000478279	TRIB2	Q92519	343 aa		13.19	□□□□□ -0.3
APTX-222	ENST00000478279	TBC1D2	Q9BYX2	928 aa		13.19	□□□□□ -0.3
APTX-222	ENST00000478279	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.19	□□□□□ -0.3
APTX-222	ENST00000478279	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.19	□□□□□ -0.3
APTX-222	ENST00000478279	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.19	□□□□□ -0.3
APTX-222	ENST00000478279	CEP126	Q9P2H0	1117 aa		13.19	□□□□□ -0.3
APTX-222	ENST00000478279	MORF4L1	Q9UBU8	362 aa		13.19	□□□□□ -0.3
APTX-222	ENST00000478279	TTC28	Q96AY4	2481 aa		13.19	□□□□□ -0.3
APTX-222	ENST00000478279	EYS	Q5T1H1	3165 aa		13.18	□□□□□ -0.3
APTX-222	ENST00000478279	PLXNB2	O15031	1838 aa		13.18	□□□□□ -0.3
APTX-222	ENST00000478279	LOC285556	D6RIA3	1793 aa		13.18	□□□□□ -0.3
APTX-222	ENST00000478279	NPM3	O75607	178 aa	Known RBP	13.18	□□□□□ -0.3
APTX-222	ENST00000478279	CIAO1	O76071	339 aa		13.18	□□□□□ -0.3
APTX-222	ENST00000478279	COL6A1	P12109	1028 aa		13.18	□□□□□ -0.3
APTX-222	ENST00000478279	PRKAR2A	P13861	404 aa	Known RBP	13.18	□□□□□ -0.3
APTX-222	ENST00000478279	CYP2B6	P20813	491 aa		13.18	□□□□□ -0.3
APTX-222	ENST00000478279	BTD	P43251	543 aa		13.18	□□□□□ -0.3
APTX-222	ENST00000478279	HMGCS2	P54868	508 aa		13.18	□□□□□ -0.3
APTX-222	ENST00000478279	MRPL50	Q8N5N7	158 aa	Known RBP	13.18	□□□□□ -0.3
APTX-222	ENST00000478279	PRUNE2	Q8WUY3	3088 aa		13.18	□□□□□ -0.3
APTX-222	ENST00000478279	PTPRC	P08575	1304 aa		13.17	□□□□□ -0.3
APTX-222	ENST00000478279	XRCC5	P13010	732 aa	Known RBP	13.17	□□□□□ -0.3
APTX-222	ENST00000478279	SH3D19	Q5HYK7	790 aa		13.17	□□□□□ -0.3
APTX-222	ENST00000478279	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.17	□□□□□ -0.3
APTX-222	ENST00000478279	CCDC102B	Q68D86	513 aa		13.17	□□□□□ -0.3
APTX-222	ENST00000478279	TRMT44	Q8IYL2	757 aa	Known RBP	13.17	□□□□□ -0.3
APTX-222	ENST00000478279	GUCD1	Q96NT3	240 aa		13.17	□□□□□ -0.3
APTX-222	ENST00000478279	NUDT12	Q9BQG2	462 aa		13.17	□□□□□ -0.3
APTX-222	ENST00000478279	SIL1	Q9H173	461 aa		13.17	□□□□□ -0.3
APTX-222	ENST00000478279	ABCF2	Q9UG63	623 aa		13.17	□□□□□ -0.3
APTX-222	ENST00000478279	MROH7-TTC4	A0A0A0MT08	1334 aa		13.16	□□□□□ -0.3
APTX-222	ENST00000478279	GPR75-ASB3	A0A0A6YYF3	556 aa		13.16	□□□□□ -0.3
APTX-222	ENST00000478279	FAM196B	A6NMK8	535 aa		13.16	□□□□□ -0.3
APTX-222	ENST00000478279	USP17L5	A8MUK1	530 aa		13.16	□□□□□ -0.3
APTX-222	ENST00000478279	CAP2	P40123	477 aa		13.16	□□□□□ -0.3
APTX-222	ENST00000478279	RHBDL3	P58872	404 aa		13.16	□□□□□ -0.3
APTX-222	ENST00000478279	MDM2	Q00987	491 aa	Predicted RBP	13.16	□□□□□ -0.3
APTX-222	ENST00000478279	LRRC26	Q2I0M4	334 aa		13.16	□□□□□ -0.3
APTX-222	ENST00000478279	SOCS4	Q8WXH5	440 aa		13.16	□□□□□ -0.3
APTX-222	ENST00000478279	PDS5A	Q29RF7	1337 aa	Known RBP	13.15	□□□□□ -0.3
APTX-222	ENST00000478279	MAP4K4	O95819	1239 aa	Predicted RBP	13.15	□□□□□ -0.3
APTX-222	ENST00000478279	ADORA1	P30542	326 aa		13.15	□□□□□ -0.3
APTX-222	ENST00000478279	IL15	P40933	162 aa	Predicted RBP	13.15	□□□□□ -0.3
APTX-222	ENST00000478279	IRX3	P78415	501 aa	Predicted RBP	13.15	□□□□□ -0.3
APTX-222	ENST00000478279	CACNB2	Q08289	660 aa	Predicted RBP	13.15	□□□□□ -0.3
APTX-222	ENST00000478279	RASGRF1	Q13972	1273 aa		13.15	□□□□□ -0.3
APTX-222	ENST00000478279	LHX8	Q68G74	356 aa		13.15	□□□□□ -0.3
APTX-222	ENST00000478279	P2RX7	Q99572	595 aa	Known RBP	13.15	□□□□□ -0.3
APTX-222	ENST00000478279	AS3MT	Q9HBK9	375 aa		13.15	□□□□□ -0.3
APTX-222	ENST00000478279	MRS2	Q9HD23	443 aa		13.15	□□□□□ -0.3
APTX-222	ENST00000478279	ATAD5	Q96QE3	1844 aa		13.14	□□□□□ -0.31
APTX-222	ENST00000478279	ZKSCAN1	P17029	563 aa	Predicted RBP	13.14	□□□□□ -0.31
APTX-222	ENST00000478279	HOXA7	P31268	230 aa	Predicted RBP	13.14	□□□□□ -0.31
APTX-222	ENST00000478279	MECOM	Q03112	1051 aa		13.14	□□□□□ -0.31
APTX-222	ENST00000478279	PDE3A	Q14432	1141 aa		13.14	□□□□□ -0.31
APTX-222	ENST00000478279	RRP1B	Q14684	758 aa	Known RBP	13.14	□□□□□ -0.31
APTX-222	ENST00000478279	ERICH6	Q7L0X2	663 aa		13.14	□□□□□ -0.31
APTX-222	ENST00000478279	GPRC5A	Q8NFJ5	357 aa		13.14	□□□□□ -0.31
APTX-222	ENST00000478279	USP6NL	Q92738	828 aa		13.14	□□□□□ -0.31
APTX-222	ENST00000478279	LBHD1	Q9BQE6	289 aa	Predicted RBP	13.14	□□□□□ -0.31
APTX-222	ENST00000478279	WDR18	Q9BV38	432 aa		13.14	□□□□□ -0.31
APTX-222	ENST00000478279	COL2A1	P02458	1487 aa	Predicted RBP	13.14	□□□□□ -0.31
APTX-222	ENST00000478279	CCND3	P30281	292 aa	Predicted RBP	13.13	□□□□□ -0.31
APTX-222	ENST00000478279	MAPK4	P31152	587 aa		13.13	□□□□□ -0.31
APTX-222	ENST00000478279	RGS2	P41220	211 aa		13.13	□□□□□ -0.31
APTX-222	ENST00000478279	BACE1	P56817	501 aa		13.13	□□□□□ -0.31
APTX-222	ENST00000478279	HERVK_113	P62684	666 aa		13.13	□□□□□ -0.31
APTX-222	ENST00000478279	ZNF384	Q8TF68	577 aa		13.13	□□□□□ -0.31
APTX-222	ENST00000478279	FAM161B	Q96MY7	647 aa		13.13	□□□□□ -0.31
APTX-222	ENST00000478279	TXNRD2	Q9NNW7	524 aa		13.13	□□□□□ -0.31
APTX-222	ENST00000478279	TMOD4	Q9NZQ9	345 aa		13.13	□□□□□ -0.31
APTX-222	ENST00000478279	HERC5	Q9UII4	1024 aa	Known RBP	13.13	□□□□□ -0.31
APTX-222	ENST00000478279	CDH23	Q9H251	3354 aa		13.13	□□□□□ -0.31
APTX-222	ENST00000478279	PEX10	O60683	326 aa		13.12	□□□□□ -0.31
APTX-222	ENST00000478279	LDHC	P07864	332 aa		13.12	□□□□□ -0.31
APTX-222	ENST00000478279	TIMM10	P62072	90 aa		13.12	□□□□□ -0.31
APTX-222	ENST00000478279	MTMR2	Q13614	643 aa		13.12	□□□□□ -0.31
APTX-222	ENST00000478279	MORN1	Q5T089	497 aa		13.12	□□□□□ -0.31
APTX-222	ENST00000478279	ZNF697	Q5TEC3	545 aa		13.12	□□□□□ -0.31
APTX-222	ENST00000478279	SSH1	Q8WYL5	1049 aa		13.12	□□□□□ -0.31
APTX-222	ENST00000478279	RBPJL	Q9UBG7	517 aa		13.12	□□□□□ -0.31
APTX-222	ENST00000478279	UBTFL1	P0CB47	393 aa	Predicted RBP	13.11	□□□□□ -0.31
APTX-222	ENST00000478279	ERVK-9	P63128	1117 aa		13.11	□□□□□ -0.31
APTX-222	ENST00000478279	ERVK-24	P63145	666 aa		13.11	□□□□□ -0.31
APTX-222	ENST00000478279	GSTO1	P78417	241 aa		13.11	□□□□□ -0.31
APTX-222	ENST00000478279	CCL14	Q16627	93 aa		13.11	□□□□□ -0.31
APTX-222	ENST00000478279		Q3C1V9	767 aa		13.11	□□□□□ -0.31
APTX-222	ENST00000478279	GPR142	Q7Z601	462 aa		13.11	□□□□□ -0.31
APTX-222	ENST00000478279	CCAR1	Q8IX12	1150 aa	Known RBP	13.11	□□□□□ -0.31
APTX-222	ENST00000478279	NSUN4	Q96CB9	384 aa	Known RBP	13.11	□□□□□ -0.31
APTX-222	ENST00000478279	COPRS	Q9NQ92	184 aa		13.11	□□□□□ -0.31
APTX-222	ENST00000478279	PA2G4	Q9UQ80	394 aa	Known RBP	13.11	□□□□□ -0.31
APTX-222	ENST00000478279	C19orf81	C9J6K1	198 aa		13.1	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms