RNA–Protein interactions for RNA: ENST00000478232.1

RCC1-211, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 2

Gene RCC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-211ENST00000478232 FAM196BA6NMK8 535 aa16.79■□□□□ 0.28
RCC1-211ENST00000478232 IDH1O75874 414 aaKnown RBP16.79■□□□□ 0.28
RCC1-211ENST00000478232 HOXD10P28358 340 aa16.79■□□□□ 0.28
RCC1-211ENST00000478232 CAP2P40123 477 aa16.79■□□□□ 0.28
RCC1-211ENST00000478232 MAP3K12Q12852 859 aa16.79■□□□□ 0.28
RCC1-211ENST00000478232 PDE3AQ14432 1141 aa16.79■□□□□ 0.28
RCC1-211ENST00000478232 GADL1Q6ZQY3 521 aa16.79■□□□□ 0.28
RCC1-211ENST00000478232 IL1RAPL2Q9NP60 686 aa16.79■□□□□ 0.28
RCC1-211ENST00000478232 PTCH2Q9Y6C5 1203 aa16.79■□□□□ 0.28
RCC1-211ENST00000478232 ADGRA2Q96PE1 1338 aa16.78■□□□□ 0.28
RCC1-211ENST00000478232 TRIM75PA6NK02 468 aa16.78■□□□□ 0.28
RCC1-211ENST00000478232 RAB11FIP3O75154 756 aa16.78■□□□□ 0.28
RCC1-211ENST00000478232 CYP2C8P10632 490 aa16.78■□□□□ 0.28
RCC1-211ENST00000478232 PSMC4P43686 418 aa16.78■□□□□ 0.28
RCC1-211ENST00000478232 SLC9C1Q4G0N8 1177 aa16.78■□□□□ 0.28
RCC1-211ENST00000478232 MAPKAPK5Q8IW41 473 aa16.78■□□□□ 0.28
RCC1-211ENST00000478232 SIRT2Q8IXJ6 389 aa16.78■□□□□ 0.28
RCC1-211ENST00000478232 TMEM106CQ9BVX2 250 aa16.78■□□□□ 0.28
RCC1-211ENST00000478232 ARHGAP39Q9C0H5 1083 aa16.78■□□□□ 0.28
RCC1-211ENST00000478232 USP17L5A8MUK1 530 aa16.77■□□□□ 0.28
RCC1-211ENST00000478232 FMNL1O95466 1100 aaPredicted RBP16.77■□□□□ 0.28
RCC1-211ENST00000478232 SPP2Q13103 211 aa16.77■□□□□ 0.28
RCC1-211ENST00000478232 TTF1Q15361 905 aaPredicted RBP16.77■□□□□ 0.28
RCC1-211ENST00000478232 METTL16Q86W50 562 aaKnown RBP16.77■□□□□ 0.28
RCC1-211ENST00000478232 ZNF280CQ8ND82 737 aa16.77■□□□□ 0.28
RCC1-211ENST00000478232 DOCK2Q92608 1830 aa16.77■□□□□ 0.27
RCC1-211ENST00000478232 FLT1P17948 1338 aa16.76■□□□□ 0.27
RCC1-211ENST00000478232 IFIT2P09913 472 aaKnown RBP16.76■□□□□ 0.27
RCC1-211ENST00000478232 BCRP11274 1271 aa16.76■□□□□ 0.27
RCC1-211ENST00000478232 DYNLL1P63167 89 aaKnown RBP16.76■□□□□ 0.27
RCC1-211ENST00000478232 CRACR2BQ8N4Y2 399 aaPredicted RBP16.76■□□□□ 0.27
RCC1-211ENST00000478232 MAGEB6Q8N7X4 407 aa16.76■□□□□ 0.27
RCC1-211ENST00000478232 ZNF333Q96JL9 665 aa16.76■□□□□ 0.27
RCC1-211ENST00000478232 TRIM47Q96LD4 638 aa16.76■□□□□ 0.27
RCC1-211ENST00000478232 ANTXR1Q9H6X2 564 aa16.76■□□□□ 0.27
RCC1-211ENST00000478232 AS3MTQ9HBK9 375 aa16.76■□□□□ 0.27
RCC1-211ENST00000478232 GINM1Q9NU53 330 aa16.76■□□□□ 0.27
RCC1-211ENST00000478232 SRRDQ9UH36 339 aa16.76■□□□□ 0.27
RCC1-211ENST00000478232 PALD1Q9ULE6 856 aa16.76■□□□□ 0.27
RCC1-211ENST00000478232 AGTPBP1Q9UPW5 1226 aa16.76■□□□□ 0.27
RCC1-211ENST00000478232 POTEFA5A3E0 1075 aa16.75■□□□□ 0.27
RCC1-211ENST00000478232 APBB1O00213 710 aa16.75■□□□□ 0.27
RCC1-211ENST00000478232 ASNSP08243 561 aa16.75■□□□□ 0.27
RCC1-211ENST00000478232 RRP1BQ14684 758 aaKnown RBP16.75■□□□□ 0.27
RCC1-211ENST00000478232 CCDC84Q86UT8 332 aaPredicted RBP16.75■□□□□ 0.27
RCC1-211ENST00000478232 PROCA1Q8NCQ7 364 aaPredicted RBP16.75■□□□□ 0.27
RCC1-211ENST00000478232 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.75■□□□□ 0.27
RCC1-211ENST00000478232 WDR18Q9BV38 432 aa16.75■□□□□ 0.27
RCC1-211ENST00000478232 TRIM34Q9BYJ4 488 aa16.75■□□□□ 0.27
RCC1-211ENST00000478232 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.75■□□□□ 0.27
RCC1-211ENST00000478232 NDUFB9Q9Y6M9 179 aa16.75■□□□□ 0.27
RCC1-211ENST00000478232 HLA-DOAP06340 250 aa16.74■□□□□ 0.27
RCC1-211ENST00000478232 CTGFP29279 349 aa16.74■□□□□ 0.27
RCC1-211ENST00000478232 FCGRTP55899 365 aa16.74■□□□□ 0.27
RCC1-211ENST00000478232 MIGA1Q8NAN2 632 aa16.74■□□□□ 0.27
RCC1-211ENST00000478232 SMCR8Q8TEV9 937 aaPredicted RBP16.74■□□□□ 0.27
RCC1-211ENST00000478232 PNMA3Q9UL41 463 aa16.74■□□□□ 0.27
RCC1-211ENST00000478232 TNRC18O15417 2968 aaPredicted RBP16.74■□□□□ 0.27
RCC1-211ENST00000478232 ECM2O94769 699 aaPredicted RBP16.73■□□□□ 0.27
RCC1-211ENST00000478232 OSBPP22059 807 aa16.73■□□□□ 0.27
RCC1-211ENST00000478232 USP5P45974 858 aa16.73■□□□□ 0.27
RCC1-211ENST00000478232 PABPC4Q13310 644 aaKnown RBP eCLIP16.73■□□□□ 0.27
RCC1-211ENST00000478232 SH3D19Q5HYK7 790 aa16.73■□□□□ 0.27
RCC1-211ENST00000478232 SAP30BPQ9UHR5 308 aaKnown RBP16.73■□□□□ 0.27
RCC1-211ENST00000478232 EN2P19622 333 aaPredicted RBP16.72■□□□□ 0.27
RCC1-211ENST00000478232 SLC4A8Q2Y0W8 1093 aa16.72■□□□□ 0.27
RCC1-211ENST00000478232 TREML2Q5T2D2 321 aa16.72■□□□□ 0.27
RCC1-211ENST00000478232 SLC9C2Q5TAH2 1124 aa16.72■□□□□ 0.27
RCC1-211ENST00000478232 C20orf194Q5TEA3 1177 aa16.72■□□□□ 0.27
RCC1-211ENST00000478232 TTC6Q86TZ1 520 aa16.72■□□□□ 0.27
RCC1-211ENST00000478232 RAET1EQ8TD07 263 aa16.72■□□□□ 0.27
RCC1-211ENST00000478232 SH3TC2Q8TF17 1288 aa16.72■□□□□ 0.27
RCC1-211ENST00000478232 MAGEB6P1A0A0J9YX57 407 aa16.71■□□□□ 0.27
RCC1-211ENST00000478232 C19orf81C9J6K1 198 aa16.71■□□□□ 0.27
RCC1-211ENST00000478232 GCLCP48506 637 aaPredicted RBP16.71■□□□□ 0.27
RCC1-211ENST00000478232 HMGCS2P54868 508 aa16.71■□□□□ 0.27
RCC1-211ENST00000478232 BACE1P56817 501 aa16.71■□□□□ 0.27
RCC1-211ENST00000478232 RIOK1Q9BRS2 568 aaKnown RBP16.71■□□□□ 0.27
RCC1-211ENST00000478232 DNAJC18Q9H819 358 aa16.71■□□□□ 0.27
RCC1-211ENST00000478232 HTTP42858 3142 aa16.71■□□□□ 0.27
RCC1-211ENST00000478232 DOCK1Q14185 1865 aa16.71■□□□□ 0.27
RCC1-211ENST00000478232 MYPNQ86TC9 1320 aa16.7■□□□□ 0.26
RCC1-211ENST00000478232 GOLIM4O00461 696 aa16.7■□□□□ 0.26
RCC1-211ENST00000478232 PDE6AP16499 860 aa16.7■□□□□ 0.26
RCC1-211ENST00000478232 ATP5JP18859 108 aa16.7■□□□□ 0.26
RCC1-211ENST00000478232 GRK4P32298 578 aa16.7■□□□□ 0.26
RCC1-211ENST00000478232 JAG1P78504 1218 aa16.7■□□□□ 0.26
RCC1-211ENST00000478232 PRPF38BQ5VTL8 546 aaKnown RBP16.7■□□□□ 0.26
RCC1-211ENST00000478232 TATDN1Q6P1N9 297 aa16.7■□□□□ 0.26
RCC1-211ENST00000478232 PIAS4Q8N2W9 510 aaPredicted RBP16.7■□□□□ 0.26
RCC1-211ENST00000478232 DNAJC2Q99543 621 aaKnown RBP16.7■□□□□ 0.26
RCC1-211ENST00000478232 BCL11AQ9H165 835 aa16.7■□□□□ 0.26
RCC1-211ENST00000478232 EHD4Q9H223 541 aa16.7■□□□□ 0.26
RCC1-211ENST00000478232 TMOD4Q9NZQ9 345 aa16.7■□□□□ 0.26
RCC1-211ENST00000478232 SERPINB13Q9UIV8 391 aa16.7■□□□□ 0.26
RCC1-211ENST00000478232 MAST2Q6P0Q8 1798 aa16.69■□□□□ 0.26
RCC1-211ENST00000478232 USP17L10C9JJH3 530 aa16.69■□□□□ 0.26
RCC1-211ENST00000478232 ANKRD13CQ8N6S4 541 aa16.69■□□□□ 0.26
RCC1-211ENST00000478232 CRNKL1Q9BZJ0 848 aaKnown RBP16.69■□□□□ 0.26
RCC1-211ENST00000478232 LRRCC1Q9C099 1032 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms