RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 FOXP4Q8IVH2 680 aaPredicted RBP26.44■■□□□ 1.82
COL9A3-211ENST00000477612 MAPKAPK5Q8IW41 473 aa26.44■■□□□ 1.82
COL9A3-211ENST00000477612 ERO1AQ96HE7 468 aa26.44■■□□□ 1.82
COL9A3-211ENST00000477612 ZHX2Q9Y6X8 837 aa26.44■■□□□ 1.82
COL9A3-211ENST00000477612 TLR2O60603 784 aa26.43■■□□□ 1.82
COL9A3-211ENST00000477612 FBXO46Q6PJ61 603 aaPredicted RBP26.43■■□□□ 1.82
COL9A3-211ENST00000477612 PCDHB15Q9Y5E8 787 aa26.43■■□□□ 1.82
COL9A3-211ENST00000477612 A0A0G2JLL6 359 aaPredicted RBP26.42■■□□□ 1.82
COL9A3-211ENST00000477612 FAM196BA6NMK8 535 aa26.42■■□□□ 1.82
COL9A3-211ENST00000477612 CAP2P40123 477 aa26.42■■□□□ 1.82
COL9A3-211ENST00000477612 PRRT2Q7Z6L0 340 aaPredicted RBP26.42■■□□□ 1.82
COL9A3-211ENST00000477612 MIGA1Q8NAN2 632 aa26.42■■□□□ 1.82
COL9A3-211ENST00000477612 YTHDC1Q96MU7 727 aaKnown RBP26.42■■□□□ 1.82
COL9A3-211ENST00000477612 HAUS7Q99871 368 aa26.42■■□□□ 1.82
COL9A3-211ENST00000477612 RIOK1Q9BRS2 568 aaKnown RBP26.42■■□□□ 1.82
COL9A3-211ENST00000477612 GOLIM4O00461 696 aa26.41■■□□□ 1.82
COL9A3-211ENST00000477612 RGS19P49795 217 aa26.41■■□□□ 1.82
COL9A3-211ENST00000477612 SLC9C2Q5TAH2 1124 aa26.41■■□□□ 1.82
COL9A3-211ENST00000477612 GPAT2Q6NUI2 795 aa26.41■■□□□ 1.82
COL9A3-211ENST00000477612 DNAJC2Q99543 621 aaKnown RBP26.41■■□□□ 1.82
COL9A3-211ENST00000477612 BOLA2Q9H3K6 86 aa26.41■■□□□ 1.82
COL9A3-211ENST00000477612 TCRBV5S4A2TA0A5A2 114 aa26.4■■□□□ 1.82
COL9A3-211ENST00000477612 SMARCA5O60264 1052 aaPredicted RBP26.4■■□□□ 1.82
COL9A3-211ENST00000477612 PDE6AP16499 860 aa26.4■■□□□ 1.82
COL9A3-211ENST00000477612 RRP1BQ14684 758 aaKnown RBP26.4■■□□□ 1.82
COL9A3-211ENST00000477612 FASTKD5Q7L8L6 764 aaKnown RBP26.4■■□□□ 1.82
COL9A3-211ENST00000477612 OTOP1Q7RTM1 612 aa26.4■■□□□ 1.82
COL9A3-211ENST00000477612 TBC1D2Q9BYX2 928 aa26.4■■□□□ 1.82
COL9A3-211ENST00000477612 PAG1Q9NWQ8 432 aa26.4■■□□□ 1.82
COL9A3-211ENST00000477612 PALD1Q9ULE6 856 aa26.4■■□□□ 1.82
COL9A3-211ENST00000477612 HPS5Q9UPZ3 1129 aa26.4■■□□□ 1.82
COL9A3-211ENST00000477612 DDX60LQ5H9U9 1706 aaKnown RBP26.39■■□□□ 1.82
COL9A3-211ENST00000477612 PDHXO00330 501 aa26.39■■□□□ 1.82
COL9A3-211ENST00000477612 CD99L2Q8TCZ2 262 aa26.39■■□□□ 1.82
COL9A3-211ENST00000477612 DNAJC18Q9H819 358 aa26.39■■□□□ 1.82
COL9A3-211ENST00000477612 TRIM17Q9Y577 477 aa26.39■■□□□ 1.82
COL9A3-211ENST00000477612 CAP1Q01518 475 aa26.38■■□□□ 1.81
COL9A3-211ENST00000477612 C17orf99Q6UX52 265 aa26.38■■□□□ 1.81
COL9A3-211ENST00000477612 EDC3Q96F86 508 aaKnown RBP26.38■■□□□ 1.81
COL9A3-211ENST00000477612 ADGRA2Q96PE1 1338 aa26.38■■□□□ 1.81
COL9A3-211ENST00000477612 ZNF532Q9HCE3 1301 aa26.38■■□□□ 1.81
COL9A3-211ENST00000477612 NAV1Q8NEY1 1877 aa26.37■■□□□ 1.81
COL9A3-211ENST00000477612 USP5P45974 858 aa26.37■■□□□ 1.81
COL9A3-211ENST00000477612 GINM1Q9NU53 330 aa26.37■■□□□ 1.81
COL9A3-211ENST00000477612 SLC45A1Q9Y2W3 748 aa26.37■■□□□ 1.81
COL9A3-211ENST00000477612 LOC285556D6RIA3 1793 aa26.37■■□□□ 1.81
COL9A3-211ENST00000477612 MAGEB6P1A0A0J9YX57 407 aa26.36■■□□□ 1.81
COL9A3-211ENST00000477612 HLA-DOAP06340 250 aa26.36■■□□□ 1.81
COL9A3-211ENST00000477612 ADD2P35612 726 aa26.36■■□□□ 1.81
COL9A3-211ENST00000477612 BCL11AQ9H165 835 aa26.36■■□□□ 1.81
COL9A3-211ENST00000477612 EFCC1Q9HA90 598 aa26.36■■□□□ 1.81
COL9A3-211ENST00000477612 ECHDC1Q9NTX5 307 aa26.36■■□□□ 1.81
COL9A3-211ENST00000477612 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.36■■□□□ 1.81
COL9A3-211ENST00000477612 ARHGEF6Q15052 776 aa26.35■■□□□ 1.81
COL9A3-211ENST00000477612 CRBNQ96SW2 442 aa26.35■■□□□ 1.81
COL9A3-211ENST00000477612 EHD4Q9H223 541 aa26.35■■□□□ 1.81
COL9A3-211ENST00000477612 SAP30BPQ9UHR5 308 aaKnown RBP26.35■■□□□ 1.81
COL9A3-211ENST00000477612 PTPN22Q9Y2R2 807 aa26.35■■□□□ 1.81
COL9A3-211ENST00000477612 HTTP42858 3142 aa26.35■■□□□ 1.81
COL9A3-211ENST00000477612 USP17L5A8MUK1 530 aa26.34■■□□□ 1.81
COL9A3-211ENST00000477612 CCDC84Q86UT8 332 aaPredicted RBP26.34■■□□□ 1.81
COL9A3-211ENST00000477612 CRACR2BQ8N4Y2 399 aaPredicted RBP26.34■■□□□ 1.81
COL9A3-211ENST00000477612 ZNF280CQ8ND82 737 aa26.34■■□□□ 1.81
COL9A3-211ENST00000477612 ZSWIM8A7E2V4 1837 aa26.34■■□□□ 1.81
COL9A3-211ENST00000477612 TRIM75PA6NK02 468 aa26.33■■□□□ 1.81
COL9A3-211ENST00000477612 ASNSP08243 561 aa26.33■■□□□ 1.81
COL9A3-211ENST00000477612 TATDN1Q6P1N9 297 aa26.33■■□□□ 1.81
COL9A3-211ENST00000477612 TTC6Q86TZ1 520 aa26.33■■□□□ 1.81
COL9A3-211ENST00000477612 PARK7Q99497 189 aaKnown RBP26.33■■□□□ 1.81
COL9A3-211ENST00000477612 WDR18Q9BV38 432 aa26.33■■□□□ 1.81
COL9A3-211ENST00000477612 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.33■■□□□ 1.81
COL9A3-211ENST00000477612 MGAMO43451 1857 aa26.33■■□□□ 1.81
COL9A3-211ENST00000477612 LACTBP83111 547 aaPredicted RBP26.32■■□□□ 1.8
COL9A3-211ENST00000477612 SPP2Q13103 211 aa26.32■■□□□ 1.8
COL9A3-211ENST00000477612 UBE3CQ15386 1083 aa26.32■■□□□ 1.8
COL9A3-211ENST00000477612 SH3D19Q5HYK7 790 aa26.32■■□□□ 1.8
COL9A3-211ENST00000477612 PROCA1Q8NCQ7 364 aaPredicted RBP26.32■■□□□ 1.8
COL9A3-211ENST00000477612 CRNKL1Q9BZJ0 848 aaKnown RBP26.32■■□□□ 1.8
COL9A3-211ENST00000477612 AS3MTQ9HBK9 375 aa26.32■■□□□ 1.8
COL9A3-211ENST00000477612 JAG1P78504 1218 aa26.31■■□□□ 1.8
COL9A3-211ENST00000477612 AAMPQ13685 434 aa26.31■■□□□ 1.8
COL9A3-211ENST00000477612 GADL1Q6ZQY3 521 aa26.31■■□□□ 1.8
COL9A3-211ENST00000477612 TRIM34Q9BYJ4 488 aa26.31■■□□□ 1.8
COL9A3-211ENST00000477612 SERPINB13Q9UIV8 391 aa26.31■■□□□ 1.8
COL9A3-211ENST00000477612 AGTPBP1Q9UPW5 1226 aa26.31■■□□□ 1.8
COL9A3-211ENST00000477612 BAZ2AQ9UIF9 1905 aaKnown RBP26.3■■□□□ 1.8
COL9A3-211ENST00000477612 GNRH1P01148 92 aa26.3■■□□□ 1.8
COL9A3-211ENST00000477612 BCRP11274 1271 aa26.3■■□□□ 1.8
COL9A3-211ENST00000477612 LCORLQ8N3X6 602 aa26.3■■□□□ 1.8
COL9A3-211ENST00000477612 CPA4Q9UI42 421 aa26.3■■□□□ 1.8
COL9A3-211ENST00000477612 KIF22Q14807 665 aa26.29■■□□□ 1.8
COL9A3-211ENST00000477612 ZSCAN25Q6NSZ9 544 aa26.29■■□□□ 1.8
COL9A3-211ENST00000477612 GPATCH3Q96I76 525 aa26.29■■□□□ 1.8
COL9A3-211ENST00000477612 DCP1AQ9NPI6 582 aaPredicted RBP26.29■■□□□ 1.8
COL9A3-211ENST00000477612 CYP2C8P10632 490 aa26.28■■□□□ 1.8
COL9A3-211ENST00000477612 PLCD1P51178 756 aa26.28■■□□□ 1.8
COL9A3-211ENST00000477612 GABPAQ06546 454 aa26.28■■□□□ 1.8
COL9A3-211ENST00000477612 ZBTB21Q9ULJ3 1066 aa26.28■■□□□ 1.8
COL9A3-211ENST00000477612 TTC41PQ6P2S7 1318 aa26.28■■□□□ 1.8
COL9A3-211ENST00000477612 MYH8P13535 1937 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms