RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 ABCA3Q99758 1704 aa7.39□□□□□ -1.23
VPS45-207ENST00000477558 METTL12A8MUP2 240 aa7.38□□□□□ -1.23
VPS45-207ENST00000477558 SMNDC1O75940 238 aaKnown RBP eCLIP7.38□□□□□ -1.23
VPS45-207ENST00000477558 PROCP04070 461 aa7.38□□□□□ -1.23
VPS45-207ENST00000477558 NID1P14543 1247 aa7.38□□□□□ -1.23
VPS45-207ENST00000477558 PIP4K2BP78356 416 aa7.38□□□□□ -1.23
VPS45-207ENST00000477558 KIAA0319Q5VV43 1072 aa7.38□□□□□ -1.23
VPS45-207ENST00000477558 ALG1LQ6GMV1 187 aa7.38□□□□□ -1.23
VPS45-207ENST00000477558 TMEM102Q8N9M5 508 aaPredicted RBP7.38□□□□□ -1.23
VPS45-207ENST00000477558 TRIM11Q96F44 468 aa7.38□□□□□ -1.23
VPS45-207ENST00000477558 TCF12Q99081 682 aa7.38□□□□□ -1.23
VPS45-207ENST00000477558 AKAP12Q02952 1782 aa7.38□□□□□ -1.23
VPS45-207ENST00000477558 MON2Q7Z3U7 1717 aa7.37□□□□□ -1.23
VPS45-207ENST00000477558 BAG6P46379 1132 aa7.37□□□□□ -1.23
VPS45-207ENST00000477558 ATP2B2Q01814 1243 aa7.37□□□□□ -1.23
VPS45-207ENST00000477558 DMRTC2Q8IXT2 367 aaPredicted RBP7.37□□□□□ -1.23
VPS45-207ENST00000477558 IL22RA1Q8N6P7 574 aa7.37□□□□□ -1.23
VPS45-207ENST00000477558 FOXD4L4Q8WXT5 416 aaPredicted RBP7.37□□□□□ -1.23
VPS45-207ENST00000477558 BCL2L13Q9BXK5 485 aa7.37□□□□□ -1.23
VPS45-207ENST00000477558 EHD4Q9H223 541 aa7.37□□□□□ -1.23
VPS45-207ENST00000477558 LIN7BQ9HAP6 207 aa7.37□□□□□ -1.23
VPS45-207ENST00000477558 SH2B1Q9NRF2 756 aaPredicted RBP7.37□□□□□ -1.23
VPS45-207ENST00000477558 NLRP2Q9NX02 1062 aa7.37□□□□□ -1.23
VPS45-207ENST00000477558 USP54Q70EL1 1684 aa7.37□□□□□ -1.23
VPS45-207ENST00000477558 POLR3AO14802 1390 aaPredicted RBP7.37□□□□□ -1.23
VPS45-207ENST00000477558 USP47Q96K76 1375 aa7.37□□□□□ -1.23
VPS45-207ENST00000477558 GRIA4P48058 902 aa7.36□□□□□ -1.23
VPS45-207ENST00000477558 GRM2Q14416 872 aa7.36□□□□□ -1.23
VPS45-207ENST00000477558 SPRED3Q2MJR0 410 aa7.36□□□□□ -1.23
VPS45-207ENST00000477558 ILDR2Q71H61 639 aa7.36□□□□□ -1.23
VPS45-207ENST00000477558 CCNJLQ8IV13 435 aa7.36□□□□□ -1.23
VPS45-207ENST00000477558 GLIS3Q8NEA6 775 aa7.36□□□□□ -1.23
VPS45-207ENST00000477558 TESK2Q96S53 571 aa7.36□□□□□ -1.23
VPS45-207ENST00000477558 ORAI2Q96SN7 254 aa7.36□□□□□ -1.23
VPS45-207ENST00000477558 DUSP9Q99956 384 aaKnown RBP7.36□□□□□ -1.23
VPS45-207ENST00000477558 OSBPL7Q9BZF2 842 aa7.36□□□□□ -1.23
VPS45-207ENST00000477558 SUV39H2Q9H5I1 410 aa7.36□□□□□ -1.23
VPS45-207ENST00000477558 POGKQ9P215 609 aa7.36□□□□□ -1.23
VPS45-207ENST00000477558 MKL2Q9ULH7 1088 aa7.36□□□□□ -1.23
VPS45-207ENST00000477558 MYOM1P52179 1685 aa7.36□□□□□ -1.23
VPS45-207ENST00000477558 MARF1Q9Y4F3 1742 aaKnown RBP7.36□□□□□ -1.23
VPS45-207ENST00000477558 JCADQ9P266 1359 aa7.36□□□□□ -1.23
VPS45-207ENST00000477558 LRP6O75581 1613 aa7.36□□□□□ -1.23
VPS45-207ENST00000477558 PRPF40AO75400 957 aaKnown RBP7.35□□□□□ -1.23
VPS45-207ENST00000477558 CDC25BP30305 580 aa7.35□□□□□ -1.23
VPS45-207ENST00000477558 MSL1Q68DK7 614 aa7.35□□□□□ -1.23
VPS45-207ENST00000477558 NXPE4Q6UWF7 544 aa7.35□□□□□ -1.23
VPS45-207ENST00000477558 ASAP3Q8TDY4 903 aa7.35□□□□□ -1.23
VPS45-207ENST00000477558 FBF1Q8TES7 1133 aa7.35□□□□□ -1.23
VPS45-207ENST00000477558 PLVAPQ9BX97 442 aa7.35□□□□□ -1.23
VPS45-207ENST00000477558 CARD11Q9BXL7 1154 aa7.35□□□□□ -1.23
VPS45-207ENST00000477558 BCO2Q9BYV7 579 aa7.35□□□□□ -1.23
VPS45-207ENST00000477558 BHLHE41Q9C0J9 482 aaPredicted RBP7.35□□□□□ -1.23
VPS45-207ENST00000477558 NPHP3Q7Z494 1330 aa7.35□□□□□ -1.23
VPS45-207ENST00000477558 PNPLA6Q8IY17 1366 aa7.35□□□□□ -1.23
VPS45-207ENST00000477558 SSH2Q76I76 1423 aa7.35□□□□□ -1.23
VPS45-207ENST00000477558 CD163L1Q9NR16 1453 aa7.35□□□□□ -1.23
VPS45-207ENST00000477558 SAFB2Q14151 953 aaKnown RBP eCLIP7.35□□□□□ -1.23
VPS45-207ENST00000477558 TRAPPC3LQ5T215 181 aa7.35□□□□□ -1.23
VPS45-207ENST00000477558 GIPC2Q8TF65 315 aa7.35□□□□□ -1.23
VPS45-207ENST00000477558 FAM161BQ96MY7 647 aa7.35□□□□□ -1.23
VPS45-207ENST00000477558 HIRIP3Q9BW71 556 aaPredicted RBP7.35□□□□□ -1.23
VPS45-207ENST00000477558 ADAM19Q9H013 955 aa7.35□□□□□ -1.23
VPS45-207ENST00000477558 PARP2Q9UGN5 583 aa7.35□□□□□ -1.23
VPS45-207ENST00000477558 SBNO1A3KN83 1393 aa7.34□□□□□ -1.23
VPS45-207ENST00000477558 TNS3Q68CZ2 1445 aa7.34□□□□□ -1.23
VPS45-207ENST00000477558 GNB5O14775 395 aa7.34□□□□□ -1.23
VPS45-207ENST00000477558 PTPRAP18433 802 aa7.34□□□□□ -1.23
VPS45-207ENST00000477558 EPHA1P21709 976 aa7.34□□□□□ -1.23
VPS45-207ENST00000477558 CDC27P30260 824 aa7.34□□□□□ -1.23
VPS45-207ENST00000477558 WFDC8Q8IUA0 241 aa7.34□□□□□ -1.23
VPS45-207ENST00000477558 PUS7Q96PZ0 661 aaKnown RBP7.34□□□□□ -1.23
VPS45-207ENST00000477558 MUC3BQ9H195 1237 aa7.34□□□□□ -1.23
VPS45-207ENST00000477558 PHRF1Q9P1Y6 1649 aaKnown RBP7.34□□□□□ -1.24
VPS45-207ENST00000477558 CPSF1Q10570 1443 aaKnown RBP7.33□□□□□ -1.24
VPS45-207ENST00000477558 PIK3C2AO00443 1686 aa7.33□□□□□ -1.24
VPS45-207ENST00000477558 A0A096LPE4 126 aa7.33□□□□□ -1.24
VPS45-207ENST00000477558 A0A1W2PPZ6 126 aa7.33□□□□□ -1.24
VPS45-207ENST00000477558 LINC01387J3KSC0 135 aa7.33□□□□□ -1.24
VPS45-207ENST00000477558 K7ELQ4 463 aaPredicted RBP7.33□□□□□ -1.24
VPS45-207ENST00000477558 PIK3R2O00459 728 aa7.33□□□□□ -1.24
VPS45-207ENST00000477558 TXNDC11Q6PKC3 985 aa7.33□□□□□ -1.24
VPS45-207ENST00000477558 BSNDQ8WZ55 320 aa7.33□□□□□ -1.24
VPS45-207ENST00000477558 CDK19Q9BWU1 502 aa7.33□□□□□ -1.24
VPS45-207ENST00000477558 KRTAP4-8Q9BYQ9 185 aa7.33□□□□□ -1.24
VPS45-207ENST00000477558 ABCB6Q9NP58 842 aa7.33□□□□□ -1.24
VPS45-207ENST00000477558 SOX13Q9UN79 622 aa7.33□□□□□ -1.24
VPS45-207ENST00000477558 SPATA31A6Q5VVP1 1343 aa7.33□□□□□ -1.24
VPS45-207ENST00000477558 BRD4O60885 1362 aaPredicted RBP7.33□□□□□ -1.24
VPS45-207ENST00000477558 PPIP5K1Q6PFW1 1433 aa7.33□□□□□ -1.24
VPS45-207ENST00000477558 TMEM238LA0A1B0GVL6 79 aa7.32□□□□□ -1.24
VPS45-207ENST00000477558 FAM229AH3BQW9 127 aa7.32□□□□□ -1.24
VPS45-207ENST00000477558 ZNF16P17020 682 aaPredicted RBP7.32□□□□□ -1.24
VPS45-207ENST00000477558 FCGRTP55899 365 aa7.32□□□□□ -1.24
VPS45-207ENST00000477558 HGSNATQ68CP4 663 aa7.32□□□□□ -1.24
VPS45-207ENST00000477558 VN1R5Q7Z5H4 357 aa7.32□□□□□ -1.24
VPS45-207ENST00000477558 DDX17Q92841 729 aaKnown RBP7.32□□□□□ -1.24
VPS45-207ENST00000477558 PPME1Q9Y570 386 aa7.32□□□□□ -1.24
VPS45-207ENST00000477558 SPATA31A3Q5VYP0 1347 aa7.32□□□□□ -1.24
VPS45-207ENST00000477558 EVC2Q86UK5 1308 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms