RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 MS4A4AQ96JQ5 239 aa14.91□□□□□ -0.02
CLCNKA-205ENST00000477360 PICK1Q9NRD5 415 aa14.91□□□□□ -0.02
CLCNKA-205ENST00000477360 RNF186Q9NXI6 227 aa14.91□□□□□ -0.02
CLCNKA-205ENST00000477360 KCNH4Q9UQ05 1017 aa14.91□□□□□ -0.02
CLCNKA-205ENST00000477360 RNF113AO15541 343 aaKnown RBP14.9□□□□□ -0.02
CLCNKA-205ENST00000477360 IGHDP01880 384 aa14.9□□□□□ -0.02
CLCNKA-205ENST00000477360 GJA5P36382 358 aa14.9□□□□□ -0.02
CLCNKA-205ENST00000477360 DYNLL1P63167 89 aaKnown RBP14.9□□□□□ -0.02
CLCNKA-205ENST00000477360 IFNL1Q8IU54 200 aa14.9□□□□□ -0.02
CLCNKA-205ENST00000477360 MAPKAPK5Q8IW41 473 aa14.9□□□□□ -0.02
CLCNKA-205ENST00000477360 APPBP2Q92624 585 aa14.9□□□□□ -0.02
CLCNKA-205ENST00000477360 EDC3Q96F86 508 aaKnown RBP14.9□□□□□ -0.02
CLCNKA-205ENST00000477360 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.9□□□□□ -0.02
CLCNKA-205ENST00000477360 OTOFQ9HC10 1997 aa14.9□□□□□ -0.02
CLCNKA-205ENST00000477360 FOCADQ5VW36 1801 aa14.89□□□□□ -0.03
CLCNKA-205ENST00000477360 GNAT2P19087 354 aa14.89□□□□□ -0.03
CLCNKA-205ENST00000477360 INPP5BP32019 993 aa14.89□□□□□ -0.03
CLCNKA-205ENST00000477360 CAP2P40123 477 aa14.89□□□□□ -0.03
CLCNKA-205ENST00000477360 EVI5LQ96CN4 794 aa14.89□□□□□ -0.03
CLCNKA-205ENST00000477360 DDRGK1Q96HY6 314 aa14.89□□□□□ -0.03
CLCNKA-205ENST00000477360 SERPINB13Q9UIV8 391 aa14.89□□□□□ -0.03
CLCNKA-205ENST00000477360 MYO5AQ9Y4I1 1855 aaKnown RBP14.89□□□□□ -0.03
CLCNKA-205ENST00000477360 IRF6O14896 467 aa14.88□□□□□ -0.03
CLCNKA-205ENST00000477360 ASNSP08243 561 aa14.88□□□□□ -0.03
CLCNKA-205ENST00000477360 TATDN1Q6P1N9 297 aa14.88□□□□□ -0.03
CLCNKA-205ENST00000477360 OTUD7AQ8TE49 926 aaPredicted RBP14.88□□□□□ -0.03
CLCNKA-205ENST00000477360 OTUD5Q96G74 571 aa14.88□□□□□ -0.03
CLCNKA-205ENST00000477360 TRIM34Q9BYJ4 488 aa14.88□□□□□ -0.03
CLCNKA-205ENST00000477360 PALD1Q9ULE6 856 aa14.88□□□□□ -0.03
CLCNKA-205ENST00000477360 TRPA1O75762 1119 aa14.87□□□□□ -0.03
CLCNKA-205ENST00000477360 PTPRAP18433 802 aa14.87□□□□□ -0.03
CLCNKA-205ENST00000477360 LBX1P52954 281 aa14.87□□□□□ -0.03
CLCNKA-205ENST00000477360 FASTKD5Q7L8L6 764 aaKnown RBP14.87□□□□□ -0.03
CLCNKA-205ENST00000477360 AMOTL1Q8IY63 956 aa14.87□□□□□ -0.03
CLCNKA-205ENST00000477360 LCORLQ8N3X6 602 aa14.87□□□□□ -0.03
CLCNKA-205ENST00000477360 CRACR2BQ8N4Y2 399 aaPredicted RBP14.87□□□□□ -0.03
CLCNKA-205ENST00000477360 LNPKQ9C0E8 428 aa14.87□□□□□ -0.03
CLCNKA-205ENST00000477360 BCL11AQ9H165 835 aa14.87□□□□□ -0.03
CLCNKA-205ENST00000477360 DCP1AQ9NPI6 582 aaPredicted RBP14.87□□□□□ -0.03
CLCNKA-205ENST00000477360 SWAP70Q9UH65 585 aa14.87□□□□□ -0.03
CLCNKA-205ENST00000477360 SLC45A1Q9Y2W3 748 aa14.87□□□□□ -0.03
CLCNKA-205ENST00000477360 AFG3L2Q9Y4W6 797 aa14.87□□□□□ -0.03
CLCNKA-205ENST00000477360 CCL15-CCL14A0A0B4J2E2 113 aa14.86□□□□□ -0.03
CLCNKA-205ENST00000477360 MBD4O95243 580 aa14.86□□□□□ -0.03
CLCNKA-205ENST00000477360 GABPAQ06546 454 aa14.86□□□□□ -0.03
CLCNKA-205ENST00000477360 CCL15Q16663 113 aa14.86□□□□□ -0.03
CLCNKA-205ENST00000477360 ANKRD23Q86SG2 305 aa14.86□□□□□ -0.03
CLCNKA-205ENST00000477360 BRI3BPQ8WY22 251 aa14.86□□□□□ -0.03
CLCNKA-205ENST00000477360 STRBPQ96SI9 672 aaKnown RBP14.86□□□□□ -0.03
CLCNKA-205ENST00000477360 WDR18Q9BV38 432 aa14.86□□□□□ -0.03
CLCNKA-205ENST00000477360 AS3MTQ9HBK9 375 aa14.86□□□□□ -0.03
CLCNKA-205ENST00000477360 ZHX2Q9Y6X8 837 aa14.86□□□□□ -0.03
CLCNKA-205ENST00000477360 A0A0G2JLL6 359 aaPredicted RBP14.85□□□□□ -0.03
CLCNKA-205ENST00000477360 IGF2BP3O00425 579 aaKnown RBP eCLIP14.85□□□□□ -0.03
CLCNKA-205ENST00000477360 SBK1Q52WX2 424 aa14.85□□□□□ -0.03
CLCNKA-205ENST00000477360 ZMYM1Q5SVZ6 1142 aa14.85□□□□□ -0.03
CLCNKA-205ENST00000477360 TSHZ3Q63HK5 1081 aa14.85□□□□□ -0.03
CLCNKA-205ENST00000477360 PRRT2Q7Z6L0 340 aaPredicted RBP14.85□□□□□ -0.03
CLCNKA-205ENST00000477360 PLEKHM2Q8IWE5 1019 aa14.85□□□□□ -0.03
CLCNKA-205ENST00000477360 CNKSR2Q8WXI2 1034 aa14.85□□□□□ -0.03
CLCNKA-205ENST00000477360 PTPN18Q99952 460 aa14.85□□□□□ -0.03
CLCNKA-205ENST00000477360 FSD1Q9BTV5 496 aa14.85□□□□□ -0.03
CLCNKA-205ENST00000477360 PUS7LQ9H0K6 701 aaKnown RBP14.85□□□□□ -0.03
CLCNKA-205ENST00000477360 DNAJC18Q9H819 358 aa14.85□□□□□ -0.03
CLCNKA-205ENST00000477360 ARMT1Q9H993 441 aa14.85□□□□□ -0.03
CLCNKA-205ENST00000477360 MCM9Q9NXL9 1143 aa14.85□□□□□ -0.03
CLCNKA-205ENST00000477360 PPP4R2Q9NY27 417 aa14.85□□□□□ -0.03
CLCNKA-205ENST00000477360 ARPP21Q9UBL0 812 aaPredicted RBP14.85□□□□□ -0.03
CLCNKA-205ENST00000477360 AK9Q5TCS8 1911 aa14.85□□□□□ -0.03
CLCNKA-205ENST00000477360 CDK5RAP2Q96SN8 1893 aa14.84□□□□□ -0.03
CLCNKA-205ENST00000477360 DDX60LQ5H9U9 1706 aaKnown RBP14.84□□□□□ -0.03
CLCNKA-205ENST00000477360 USP17L5A8MUK1 530 aa14.84□□□□□ -0.03
CLCNKA-205ENST00000477360 MKRN3Q13064 507 aaKnown RBP14.84□□□□□ -0.03
CLCNKA-205ENST00000477360 ZNF280CQ8ND82 737 aa14.84□□□□□ -0.03
CLCNKA-205ENST00000477360 OSBP2Q969R2 916 aa14.84□□□□□ -0.03
CLCNKA-205ENST00000477360 MYH7P12883 1935 aa14.84□□□□□ -0.03
CLCNKA-205ENST00000477360 POLR3DP05423 398 aaPredicted RBP14.83□□□□□ -0.04
CLCNKA-205ENST00000477360 C12orf60Q5U649 245 aa14.83□□□□□ -0.04
CLCNKA-205ENST00000477360 B4GALNT3Q6L9W6 998 aa14.83□□□□□ -0.04
CLCNKA-205ENST00000477360 PROCA1Q8NCQ7 364 aaPredicted RBP14.83□□□□□ -0.04
CLCNKA-205ENST00000477360 SDR42E1Q8WUS8 393 aa14.83□□□□□ -0.04
CLCNKA-205ENST00000477360 ZFYVE28Q9HCC9 887 aa14.83□□□□□ -0.04
CLCNKA-205ENST00000477360 HELLSQ9NRZ9 838 aa14.83□□□□□ -0.04
CLCNKA-205ENST00000477360 SAP30BPQ9UHR5 308 aaKnown RBP14.83□□□□□ -0.04
CLCNKA-205ENST00000477360 SLC4A4Q9Y6R1 1079 aa14.83□□□□□ -0.04
CLCNKA-205ENST00000477360 DOCK1Q14185 1865 aa14.82□□□□□ -0.04
CLCNKA-205ENST00000477360 C19orf81C9J6K1 198 aa14.82□□□□□ -0.04
CLCNKA-205ENST00000477360 PATL2C9JE40 543 aaKnown RBP14.82□□□□□ -0.04
CLCNKA-205ENST00000477360 GPR25O00155 361 aa14.82□□□□□ -0.04
CLCNKA-205ENST00000477360 HIP1O00291 1037 aa14.82□□□□□ -0.04
CLCNKA-205ENST00000477360 GPAA1O43292 621 aa14.82□□□□□ -0.04
CLCNKA-205ENST00000477360 PLCD1P51178 756 aa14.82□□□□□ -0.04
CLCNKA-205ENST00000477360 MOGSQ13724 837 aa14.82□□□□□ -0.04
CLCNKA-205ENST00000477360 PKN2Q16513 984 aaKnown RBP14.82□□□□□ -0.04
CLCNKA-205ENST00000477360 SH3D19Q5HYK7 790 aa14.82□□□□□ -0.04
CLCNKA-205ENST00000477360 COL13A1Q5TAT6 717 aaPredicted RBP14.82□□□□□ -0.04
CLCNKA-205ENST00000477360 CCDC17Q96LX7 622 aa14.82□□□□□ -0.04
CLCNKA-205ENST00000477360 NACAP1Q9BZK3 213 aa14.82□□□□□ -0.04
CLCNKA-205ENST00000477360 ZBTB21Q9ULJ3 1066 aa14.82□□□□□ -0.04
CLCNKA-205ENST00000477360 SIPA1L1O43166 1804 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms