RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 CCNYL3P0C7X3 344 aa9.15□□□□□ -0.95
BRCA1-214ENST00000477152 PTCRAQ6ISU1 281 aaPredicted RBP9.15□□□□□ -0.95
BRCA1-214ENST00000477152 KIAA0825Q8IV33 1275 aa9.15□□□□□ -0.95
BRCA1-214ENST00000477152 SLC10A4Q96EP9 437 aa9.15□□□□□ -0.95
BRCA1-214ENST00000477152 CD209Q9NNX6 404 aa9.15□□□□□ -0.95
BRCA1-214ENST00000477152 CNNM1Q9NRU3 951 aa9.15□□□□□ -0.95
BRCA1-214ENST00000477152 ASTN2O75129 1339 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-214ENST00000477152 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-214ENST00000477152 WDHD1O75717 1129 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-214ENST00000477152 IREB2P48200 963 aaKnown RBP9.14□□□□□ -0.95
BRCA1-214ENST00000477152 MMP16P51512 607 aa9.14□□□□□ -0.95
BRCA1-214ENST00000477152 ARHGEF6Q15052 776 aa9.14□□□□□ -0.95
BRCA1-214ENST00000477152 DLK2Q6UY11 383 aa9.14□□□□□ -0.95
BRCA1-214ENST00000477152 EVA1BQ9NVM1 165 aa9.14□□□□□ -0.95
BRCA1-214ENST00000477152 ANGEL1Q9UNK9 670 aaKnown RBP9.14□□□□□ -0.95
BRCA1-214ENST00000477152 FANCIQ9NVI1 1328 aa9.14□□□□□ -0.95
BRCA1-214ENST00000477152 VAMP4O75379 141 aa9.13□□□□□ -0.95
BRCA1-214ENST00000477152 ALDH1L1O75891 902 aa9.13□□□□□ -0.95
BRCA1-214ENST00000477152 TNNI2P48788 182 aa9.13□□□□□ -0.95
BRCA1-214ENST00000477152 RBM5P52756 815 aaKnown RBP eCLIP9.13□□□□□ -0.95
BRCA1-214ENST00000477152 LDHAL6AQ6ZMR3 332 aa9.13□□□□□ -0.95
BRCA1-214ENST00000477152 G2E3Q7L622 706 aa9.13□□□□□ -0.95
BRCA1-214ENST00000477152 FKTNO75072 461 aa9.13□□□□□ -0.95
BRCA1-214ENST00000477152 SASH1O94885 1247 aa9.13□□□□□ -0.95
BRCA1-214ENST00000477152 ZBTB48P10074 688 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-214ENST00000477152 IL1R1P14778 569 aa9.13□□□□□ -0.95
BRCA1-214ENST00000477152 OCSTAMPQ9BR26 566 aa9.13□□□□□ -0.95
BRCA1-214ENST00000477152 CFHR5Q9BXR6 569 aa9.13□□□□□ -0.95
BRCA1-214ENST00000477152 DEFB129Q9H1M3 183 aa9.13□□□□□ -0.95
BRCA1-214ENST00000477152 GPR25O00155 361 aa9.12□□□□□ -0.95
BRCA1-214ENST00000477152 GRM8O00222 908 aa9.12□□□□□ -0.95
BRCA1-214ENST00000477152 ADH1BP00325 375 aa9.12□□□□□ -0.95
BRCA1-214ENST00000477152 CASP7P55210 303 aa9.12□□□□□ -0.95
BRCA1-214ENST00000477152 EXOSC9Q06265 439 aaKnown RBP9.12□□□□□ -0.95
BRCA1-214ENST00000477152 UBE4AQ14139 1066 aa9.12□□□□□ -0.95
BRCA1-214ENST00000477152 FBXO46Q6PJ61 603 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-214ENST00000477152 VPS37DQ86XT2 251 aa9.12□□□□□ -0.95
BRCA1-214ENST00000477152 HOOK2Q96ED9 719 aa9.12□□□□□ -0.95
BRCA1-214ENST00000477152 PPP1R12CQ9BZL4 782 aa9.12□□□□□ -0.95
BRCA1-214ENST00000477152 SRCIN1Q9C0H9 1055 aa9.12□□□□□ -0.95
BRCA1-214ENST00000477152 TFIP11Q9UBB9 837 aaKnown RBP9.12□□□□□ -0.95
BRCA1-214ENST00000477152 PALM3A6NDB9 673 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-214ENST00000477152 TBC1D8O95759 1140 aa9.12□□□□□ -0.95
BRCA1-214ENST00000477152 KCNH2Q12809 1159 aa9.12□□□□□ -0.95
BRCA1-214ENST00000477152 SEMA3FQ13275 785 aa9.12□□□□□ -0.95
BRCA1-214ENST00000477152 MAP3K11Q16584 847 aa9.12□□□□□ -0.95
BRCA1-214ENST00000477152 CAVIN4Q5BKX8 364 aa9.12□□□□□ -0.95
BRCA1-214ENST00000477152 SPRYD7Q5W111 196 aa9.12□□□□□ -0.95
BRCA1-214ENST00000477152 LMBR1LQ6UX01 489 aa9.12□□□□□ -0.95
BRCA1-214ENST00000477152 RETREG2Q8NC44 543 aa9.12□□□□□ -0.95
BRCA1-214ENST00000477152 ZNF296Q8WUU4 475 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-214ENST00000477152 MXD3Q9BW11 206 aa9.12□□□□□ -0.95
BRCA1-214ENST00000477152 MROH5Q6ZUA9 1318 aa9.11□□□□□ -0.95
BRCA1-214ENST00000477152 ZNF646O15015 1829 aaPredicted RBP9.11□□□□□ -0.95
BRCA1-214ENST00000477152 ZBBXA8MT70 800 aa9.11□□□□□ -0.95
BRCA1-214ENST00000477152 PIK3CDO00329 1044 aa9.11□□□□□ -0.95
BRCA1-214ENST00000477152 PLIN1O60240 522 aa9.11□□□□□ -0.95
BRCA1-214ENST00000477152 FRAT2O75474 233 aaPredicted RBP9.11□□□□□ -0.95
BRCA1-214ENST00000477152 PTPN12Q05209 780 aaKnown RBP9.11□□□□□ -0.95
BRCA1-214ENST00000477152 NR1H3Q13133 447 aa9.11□□□□□ -0.95
BRCA1-214ENST00000477152 PRKG1Q13976 671 aa9.11□□□□□ -0.95
BRCA1-214ENST00000477152 CFAP100Q494V2 611 aa9.11□□□□□ -0.95
BRCA1-214ENST00000477152 BEND3Q5T5X7 828 aa9.11□□□□□ -0.95
BRCA1-214ENST00000477152 LDLRAD1Q5T700 205 aa9.11□□□□□ -0.95
BRCA1-214ENST00000477152 PRAMEF18Q5VWM3 479 aa9.11□□□□□ -0.95
BRCA1-214ENST00000477152 INTS3Q68E01 1043 aaKnown RBP9.11□□□□□ -0.95
BRCA1-214ENST00000477152 TXNRD3Q86VQ6 643 aa9.11□□□□□ -0.95
BRCA1-214ENST00000477152 ANKRD13AQ8IZ07 590 aa9.11□□□□□ -0.95
BRCA1-214ENST00000477152 TBC1D22AQ8WUA7 517 aa9.11□□□□□ -0.95
BRCA1-214ENST00000477152 ERO1AQ96HE7 468 aa9.11□□□□□ -0.95
BRCA1-214ENST00000477152 VEZTQ9HBM0 779 aa9.11□□□□□ -0.95
BRCA1-214ENST00000477152 HDAC5Q9UQL6 1122 aa9.11□□□□□ -0.95
BRCA1-214ENST00000477152 TAF5LO75529 589 aa9.1□□□□□ -0.95
BRCA1-214ENST00000477152 HIBADHP31937 336 aaKnown RBP9.1□□□□□ -0.95
BRCA1-214ENST00000477152 FOXO4P98177 505 aa9.1□□□□□ -0.95
BRCA1-214ENST00000477152 SLC4A10Q6U841 1118 aa9.1□□□□□ -0.95
BRCA1-214ENST00000477152 MOB2Q70IA6 237 aa9.1□□□□□ -0.95
BRCA1-214ENST00000477152 ZBED3Q96IU2 234 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-214ENST00000477152 TMOD2Q9NZR1 351 aa9.1□□□□□ -0.95
BRCA1-214ENST00000477152 PCDH10Q9P2E7 1040 aa9.1□□□□□ -0.95
BRCA1-214ENST00000477152 A0A1B0GUL6 1792 aa9.1□□□□□ -0.95
BRCA1-214ENST00000477152 F8W031 263 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-214ENST00000477152 S1PR4O95977 384 aa9.1□□□□□ -0.95
BRCA1-214ENST00000477152 SOX10P56693 466 aa9.1□□□□□ -0.95
BRCA1-214ENST00000477152 TBC1D9Q6ZT07 1266 aa9.1□□□□□ -0.95
BRCA1-214ENST00000477152 MAST3O60307 1309 aa9.09□□□□□ -0.95
BRCA1-214ENST00000477152 FAM205AQ6ZU69 1335 aa9.09□□□□□ -0.95
BRCA1-214ENST00000477152 CARNS1A5YM72 827 aa9.09□□□□□ -0.95
BRCA1-214ENST00000477152 MFSD14BQ5SR56 506 aa9.09□□□□□ -0.95
BRCA1-214ENST00000477152 NYAP1Q6ZVC0 841 aa9.09□□□□□ -0.95
BRCA1-214ENST00000477152 GCC1Q96CN9 775 aa9.09□□□□□ -0.95
BRCA1-214ENST00000477152 WNK4Q96J92 1243 aa9.09□□□□□ -0.95
BRCA1-214ENST00000477152 SLC6A16Q9GZN6 736 aa9.09□□□□□ -0.95
BRCA1-214ENST00000477152 F6X3S4 739 aa9.08□□□□□ -0.96
BRCA1-214ENST00000477152 PDIA4P13667 645 aaKnown RBP9.08□□□□□ -0.96
BRCA1-214ENST00000477152 KLRK1P26718 216 aa9.08□□□□□ -0.96
BRCA1-214ENST00000477152 HDLBPQ00341 1268 aaKnown RBP9.08□□□□□ -0.96
BRCA1-214ENST00000477152 UNC93B1Q9H1C4 597 aa9.08□□□□□ -0.96
BRCA1-214ENST00000477152 IL21Q9HBE4 155 aa9.08□□□□□ -0.96
BRCA1-214ENST00000477152 TTF2Q9UNY4 1162 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms