RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 GOLIM4O00461 696 aa12.37□□□□□ -0.43
CCM2-208ENST00000476594 ATP5JP18859 108 aa12.37□□□□□ -0.43
CCM2-208ENST00000476594 SP3Q02447 781 aa12.37□□□□□ -0.43
CCM2-208ENST00000476594 LRRFIP1Q32MZ4 808 aaKnown RBP12.37□□□□□ -0.43
CCM2-208ENST00000476594 SLC9C2Q5TAH2 1124 aa12.37□□□□□ -0.43
CCM2-208ENST00000476594 SH3BP5LQ7L8J4 393 aa12.37□□□□□ -0.43
CCM2-208ENST00000476594 ANKRD23Q86SG2 305 aa12.37□□□□□ -0.43
CCM2-208ENST00000476594 TTC6Q86TZ1 520 aa12.37□□□□□ -0.43
CCM2-208ENST00000476594 FOXP4Q8IVH2 680 aaPredicted RBP12.37□□□□□ -0.43
CCM2-208ENST00000476594 MAPKAPK5Q8IW41 473 aa12.37□□□□□ -0.43
CCM2-208ENST00000476594 CRNKL1Q9BZJ0 848 aaKnown RBP12.37□□□□□ -0.43
CCM2-208ENST00000476594 DCTPP1Q9H773 170 aa12.37□□□□□ -0.43
CCM2-208ENST00000476594 AS3MTQ9HBK9 375 aa12.37□□□□□ -0.43
CCM2-208ENST00000476594 GINM1Q9NU53 330 aa12.37□□□□□ -0.43
CCM2-208ENST00000476594 MAGEB6P1A0A0J9YX57 407 aa12.36□□□□□ -0.43
CCM2-208ENST00000476594 PHF20L1A8MW92 1017 aa12.36□□□□□ -0.43
CCM2-208ENST00000476594 PTPRAP18433 802 aa12.36□□□□□ -0.43
CCM2-208ENST00000476594 FBXO46Q6PJ61 603 aaPredicted RBP12.36□□□□□ -0.43
CCM2-208ENST00000476594 AMOTL1Q8IY63 956 aa12.36□□□□□ -0.43
CCM2-208ENST00000476594 MIGA1Q8NAN2 632 aa12.36□□□□□ -0.43
CCM2-208ENST00000476594 DDRGK1Q96HY6 314 aa12.36□□□□□ -0.43
CCM2-208ENST00000476594 PARK7Q99497 189 aaKnown RBP12.36□□□□□ -0.43
CCM2-208ENST00000476594 PTPN18Q99952 460 aa12.36□□□□□ -0.43
CCM2-208ENST00000476594 BOLA2Q9H3K6 86 aa12.36□□□□□ -0.43
CCM2-208ENST00000476594 ANTXR1Q9H6X2 564 aa12.36□□□□□ -0.43
CCM2-208ENST00000476594 ZHX2Q9Y6X8 837 aa12.36□□□□□ -0.43
CCM2-208ENST00000476594 BTBD19C9JJ37 291 aa12.35□□□□□ -0.43
CCM2-208ENST00000476594 ERC2O15083 957 aa12.35□□□□□ -0.43
CCM2-208ENST00000476594 TLR2O60603 784 aa12.35□□□□□ -0.43
CCM2-208ENST00000476594 ASNSP08243 561 aa12.35□□□□□ -0.43
CCM2-208ENST00000476594 PDE6AP16499 860 aa12.35□□□□□ -0.43
CCM2-208ENST00000476594 CAP2P40123 477 aa12.35□□□□□ -0.43
CCM2-208ENST00000476594 PABPC4Q13310 644 aaKnown RBP eCLIP12.35□□□□□ -0.43
CCM2-208ENST00000476594 ADGRA1Q86SQ6 560 aa12.35□□□□□ -0.43
CCM2-208ENST00000476594 FAM43AQ8N2R8 423 aa12.35□□□□□ -0.43
CCM2-208ENST00000476594 HAUS7Q99871 368 aa12.35□□□□□ -0.43
CCM2-208ENST00000476594 ECHDC1Q9NTX5 307 aa12.35□□□□□ -0.43
CCM2-208ENST00000476594 TRIM17Q9Y577 477 aa12.35□□□□□ -0.43
CCM2-208ENST00000476594 NDUFB9Q9Y6M9 179 aa12.35□□□□□ -0.43
CCM2-208ENST00000476594 DOCK1Q14185 1865 aa12.35□□□□□ -0.43
CCM2-208ENST00000476594 A0A0G2JLL6 359 aaPredicted RBP12.34□□□□□ -0.43
CCM2-208ENST00000476594 USP17L5A8MUK1 530 aa12.34□□□□□ -0.43
CCM2-208ENST00000476594 PDHXO00330 501 aa12.34□□□□□ -0.43
CCM2-208ENST00000476594 GNRH1P01148 92 aa12.34□□□□□ -0.43
CCM2-208ENST00000476594 DYNLL1P63167 89 aaKnown RBP12.34□□□□□ -0.43
CCM2-208ENST00000476594 GADL1Q6ZQY3 521 aa12.34□□□□□ -0.43
CCM2-208ENST00000476594 PRRT2Q7Z6L0 340 aaPredicted RBP12.34□□□□□ -0.43
CCM2-208ENST00000476594 EFCC1Q9HA90 598 aa12.34□□□□□ -0.43
CCM2-208ENST00000476594 PNMA3Q9UL41 463 aa12.34□□□□□ -0.43
CCM2-208ENST00000476594 TAOK2Q9UL54 1235 aa12.34□□□□□ -0.43
CCM2-208ENST00000476594 SLC45A1Q9Y2W3 748 aa12.34□□□□□ -0.43
CCM2-208ENST00000476594 ZNF532Q9HCE3 1301 aa12.34□□□□□ -0.43
CCM2-208ENST00000476594 TRIM75PA6NK02 468 aa12.33□□□□□ -0.44
CCM2-208ENST00000476594 POLR3DP05423 398 aaPredicted RBP12.33□□□□□ -0.44
CCM2-208ENST00000476594 PROCA1Q8NCQ7 364 aaPredicted RBP12.33□□□□□ -0.44
CCM2-208ENST00000476594 GCC1Q96CN9 775 aa12.33□□□□□ -0.44
CCM2-208ENST00000476594 EHD4Q9H223 541 aa12.33□□□□□ -0.44
CCM2-208ENST00000476594 SAP30BPQ9UHR5 308 aaKnown RBP12.33□□□□□ -0.44
CCM2-208ENST00000476594 SERPINB13Q9UIV8 391 aa12.33□□□□□ -0.44
CCM2-208ENST00000476594 PALD1Q9ULE6 856 aa12.33□□□□□ -0.44
CCM2-208ENST00000476594 AFG3L2Q9Y4W6 797 aa12.33□□□□□ -0.44
CCM2-208ENST00000476594 TTC41PQ6P2S7 1318 aa12.33□□□□□ -0.44
CCM2-208ENST00000476594 FOCADQ5VW36 1801 aa12.32□□□□□ -0.44
CCM2-208ENST00000476594 FAM196BA6NMK8 535 aa12.32□□□□□ -0.44
CCM2-208ENST00000476594 SMARCA5O60264 1052 aaPredicted RBP12.32□□□□□ -0.44
CCM2-208ENST00000476594 ZFYP08048 801 aaPredicted RBP12.32□□□□□ -0.44
CCM2-208ENST00000476594 HOXD10P28358 340 aa12.32□□□□□ -0.44
CCM2-208ENST00000476594 ADD2P35612 726 aa12.32□□□□□ -0.44
CCM2-208ENST00000476594 PRMT2P55345 433 aa12.32□□□□□ -0.44
CCM2-208ENST00000476594 UBE3CQ15386 1083 aa12.32□□□□□ -0.44
CCM2-208ENST00000476594 METTL16Q86W50 562 aaKnown RBP12.32□□□□□ -0.44
CCM2-208ENST00000476594 ZNF280CQ8ND82 737 aa12.32□□□□□ -0.44
CCM2-208ENST00000476594 CD99L2Q8TCZ2 262 aa12.32□□□□□ -0.44
CCM2-208ENST00000476594 SMCR8Q8TEV9 937 aaPredicted RBP12.32□□□□□ -0.44
CCM2-208ENST00000476594 CRBNQ96SW2 442 aa12.32□□□□□ -0.44
CCM2-208ENST00000476594 RIOK1Q9BRS2 568 aaKnown RBP12.32□□□□□ -0.44
CCM2-208ENST00000476594 R3HDMLQ9H3Y0 253 aa12.32□□□□□ -0.44
CCM2-208ENST00000476594 CABP5Q9NP86 173 aa12.32□□□□□ -0.44
CCM2-208ENST00000476594 ATP8A2Q9NTI2 1148 aa12.32□□□□□ -0.44
CCM2-208ENST00000476594 TMOD4Q9NZQ9 345 aa12.32□□□□□ -0.44
CCM2-208ENST00000476594 MYO5AQ9Y4I1 1855 aaKnown RBP12.31□□□□□ -0.44
CCM2-208ENST00000476594 OTOP1Q7RTM1 612 aa12.31□□□□□ -0.44
CCM2-208ENST00000476594 MCM9Q9NXL9 1143 aa12.31□□□□□ -0.44
CCM2-208ENST00000476594 AGTPBP1Q9UPW5 1226 aa12.31□□□□□ -0.44
CCM2-208ENST00000476594 HPS5Q9UPZ3 1129 aa12.31□□□□□ -0.44
CCM2-208ENST00000476594 C19orf81C9J6K1 198 aa12.3□□□□□ -0.44
CCM2-208ENST00000476594 GLRX3O76003 335 aaKnown RBP12.3□□□□□ -0.44
CCM2-208ENST00000476594 OSBPP22059 807 aa12.3□□□□□ -0.44
CCM2-208ENST00000476594 SPP2Q13103 211 aa12.3□□□□□ -0.44
CCM2-208ENST00000476594 NBPF11Q86T75 865 aa12.3□□□□□ -0.44
CCM2-208ENST00000476594 WDR18Q9BV38 432 aa12.3□□□□□ -0.44
CCM2-208ENST00000476594 SWAP70Q9UH65 585 aa12.3□□□□□ -0.44
CCM2-208ENST00000476594 PCDHB15Q9Y5E8 787 aa12.3□□□□□ -0.44
CCM2-208ENST00000476594 CDK5RAP2Q96SN8 1893 aa12.29□□□□□ -0.44
CCM2-208ENST00000476594 MYH1P12882 1939 aa12.29□□□□□ -0.44
CCM2-208ENST00000476594 TCRBV5S4A2TA0A5A2 114 aa12.29□□□□□ -0.44
CCM2-208ENST00000476594 MBD4O95243 580 aa12.29□□□□□ -0.44
CCM2-208ENST00000476594 LACTBP83111 547 aaPredicted RBP12.29□□□□□ -0.44
CCM2-208ENST00000476594 HDAC1Q13547 482 aaPredicted RBP12.29□□□□□ -0.44
CCM2-208ENST00000476594 CERKLQ49MI3 558 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms