RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 FAN1Q9Y2M0 1017 aa9.61□□□□□ -0.87
VAPB-205ENST00000476395 KLF18A0A0U1RQI7 1052 aa9.61□□□□□ -0.87
VAPB-205ENST00000476395 FOXN1O15353 648 aa9.61□□□□□ -0.87
VAPB-205ENST00000476395 ARID4AP29374 1257 aaPredicted RBP9.61□□□□□ -0.87
VAPB-205ENST00000476395 NLRP12P59046 1061 aa9.61□□□□□ -0.87
VAPB-205ENST00000476395 GRIN1Q05586 938 aa9.61□□□□□ -0.87
VAPB-205ENST00000476395 GPS2Q13227 327 aa9.61□□□□□ -0.87
VAPB-205ENST00000476395 ZNF396Q96N95 335 aaPredicted RBP9.61□□□□□ -0.87
VAPB-205ENST00000476395 PLA2G12BQ9BX93 195 aa9.61□□□□□ -0.87
VAPB-205ENST00000476395 PIH1D3Q9NQM4 214 aaKnown RBP9.61□□□□□ -0.87
VAPB-205ENST00000476395 WDR19Q8NEZ3 1342 aa9.61□□□□□ -0.87
VAPB-205ENST00000476395 TMEM232C9JQI7 657 aa9.6□□□□□ -0.87
VAPB-205ENST00000476395 SPTLC2O15270 562 aa9.6□□□□□ -0.87
VAPB-205ENST00000476395 KINO60870 393 aaKnown RBP9.6□□□□□ -0.87
VAPB-205ENST00000476395 CMA1P23946 247 aa9.6□□□□□ -0.87
VAPB-205ENST00000476395 KCNJ6P48051 423 aa9.6□□□□□ -0.87
VAPB-205ENST00000476395 SLC39A14Q15043 492 aa9.6□□□□□ -0.87
VAPB-205ENST00000476395 LONRF2Q1L5Z9 754 aa9.6□□□□□ -0.87
VAPB-205ENST00000476395 IGDCC4Q8TDY8 1250 aa9.6□□□□□ -0.87
VAPB-205ENST00000476395 ZBTB12Q9Y330 459 aaPredicted RBP9.6□□□□□ -0.87
VAPB-205ENST00000476395 TOB1P50616 345 aaPredicted RBP9.6□□□□□ -0.87
VAPB-205ENST00000476395 NBPF20Q3BBV1 942 aa9.6□□□□□ -0.87
VAPB-205ENST00000476395 ANO1Q5XXA6 986 aa9.6□□□□□ -0.87
VAPB-205ENST00000476395 IMPACTQ9P2X3 320 aa9.6□□□□□ -0.87
VAPB-205ENST00000476395 AKAP2Q9Y2D5 859 aa9.6□□□□□ -0.87
VAPB-205ENST00000476395 BCL9LQ86UU0 1499 aa9.6□□□□□ -0.87
VAPB-205ENST00000476395 TTC36A6NLP5 189 aa9.6□□□□□ -0.87
VAPB-205ENST00000476395 SH2B2O14492 632 aaPredicted RBP9.6□□□□□ -0.87
VAPB-205ENST00000476395 GPAA1O43292 621 aa9.6□□□□□ -0.87
VAPB-205ENST00000476395 FKBP4Q02790 459 aaKnown RBP eCLIP9.6□□□□□ -0.87
VAPB-205ENST00000476395 CCDC73Q6ZRK6 1079 aa9.6□□□□□ -0.87
VAPB-205ENST00000476395 CLIC6Q96NY7 704 aa9.6□□□□□ -0.87
VAPB-205ENST00000476395 SLC4A9Q96Q91 983 aa9.6□□□□□ -0.87
VAPB-205ENST00000476395 NID2Q14112 1375 aa9.6□□□□□ -0.87
VAPB-205ENST00000476395 ABCC12Q96J65 1359 aa9.59□□□□□ -0.87
VAPB-205ENST00000476395 VWA3AA6NCI4 1184 aa9.59□□□□□ -0.87
VAPB-205ENST00000476395 GOLGA8BA8MQT2 603 aa9.59□□□□□ -0.87
VAPB-205ENST00000476395 RXRAP19793 462 aa9.59□□□□□ -0.87
VAPB-205ENST00000476395 ATP2B1P20020 1258 aa9.59□□□□□ -0.87
VAPB-205ENST00000476395 CEP57L1Q8IYX8 460 aa9.59□□□□□ -0.87
VAPB-205ENST00000476395 STK11IPQ8N1F8 1099 aa9.59□□□□□ -0.87
VAPB-205ENST00000476395 BANK1Q8NDB2 785 aa9.59□□□□□ -0.87
VAPB-205ENST00000476395 APPBP2Q92624 585 aa9.59□□□□□ -0.87
VAPB-205ENST00000476395 EPB41L4AQ9HCS5 686 aaPredicted RBP9.59□□□□□ -0.87
VAPB-205ENST00000476395 ARFGAP3Q9NP61 516 aa9.59□□□□□ -0.87
VAPB-205ENST00000476395 MYH6P13533 1939 aa9.59□□□□□ -0.87
VAPB-205ENST00000476395 MYH2Q9UKX2 1941 aa9.59□□□□□ -0.87
VAPB-205ENST00000476395 UBN2Q6ZU65 1347 aa9.59□□□□□ -0.87
VAPB-205ENST00000476395 MARCKSP29966 332 aaPredicted RBP9.59□□□□□ -0.87
VAPB-205ENST00000476395 GUCY1A2P33402 732 aa9.59□□□□□ -0.87
VAPB-205ENST00000476395 ADD2P35612 726 aa9.59□□□□□ -0.87
VAPB-205ENST00000476395 TBX2Q13207 712 aaPredicted RBP9.59□□□□□ -0.87
VAPB-205ENST00000476395 CCDC158Q5M9N0 1113 aa9.59□□□□□ -0.87
VAPB-205ENST00000476395 RESP18Q5W5W9 173 aa9.59□□□□□ -0.87
VAPB-205ENST00000476395 DHX58Q96C10 678 aa9.59□□□□□ -0.87
VAPB-205ENST00000476395 FAM89AQ96GI7 184 aa9.59□□□□□ -0.87
VAPB-205ENST00000476395 C8orf76Q96K31 380 aa9.59□□□□□ -0.87
VAPB-205ENST00000476395 AK7Q96M32 723 aa9.59□□□□□ -0.87
VAPB-205ENST00000476395 DESI2Q9BSY9 194 aa9.59□□□□□ -0.87
VAPB-205ENST00000476395 CWC15Q9P013 229 aaKnown RBP9.59□□□□□ -0.87
VAPB-205ENST00000476395 CICQ96RK0 1608 aaPredicted RBP9.59□□□□□ -0.87
VAPB-205ENST00000476395 TRIM28Q13263 835 aaKnown RBP9.59□□□□□ -0.87
VAPB-205ENST00000476395 PNOCQ13519 176 aa9.59□□□□□ -0.87
VAPB-205ENST00000476395 KARSQ15046 597 aaKnown RBP9.59□□□□□ -0.87
VAPB-205ENST00000476395 SF3A1Q15459 793 aaKnown RBP9.59□□□□□ -0.87
VAPB-205ENST00000476395 HLFQ16534 295 aa9.59□□□□□ -0.87
VAPB-205ENST00000476395 LONRF3Q496Y0 759 aa9.59□□□□□ -0.87
VAPB-205ENST00000476395 KCNG4Q8TDN1 519 aa9.59□□□□□ -0.87
VAPB-205ENST00000476395 KAT2BQ92831 832 aa9.59□□□□□ -0.87
VAPB-205ENST00000476395 EXOC4Q96A65 974 aa9.59□□□□□ -0.87
VAPB-205ENST00000476395 CCDC85AQ96PX6 553 aaPredicted RBP9.59□□□□□ -0.87
VAPB-205ENST00000476395 LY9Q9HBG7 655 aa9.59□□□□□ -0.87
VAPB-205ENST00000476395 PUF60Q9UHX1 559 aaKnown RBP9.59□□□□□ -0.87
VAPB-205ENST00000476395 ZMYM6O95789 1325 aa9.59□□□□□ -0.88
VAPB-205ENST00000476395 EFCAB8A8MWE9 144 aa9.58□□□□□ -0.88
VAPB-205ENST00000476395 IKBKBO14920 756 aa9.58□□□□□ -0.88
VAPB-205ENST00000476395 MAGEA9P43362 315 aa9.58□□□□□ -0.88
VAPB-205ENST00000476395 PPP2R3AQ06190 1150 aa9.58□□□□□ -0.88
VAPB-205ENST00000476395 TCIRG1Q13488 830 aa9.58□□□□□ -0.88
VAPB-205ENST00000476395 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.58□□□□□ -0.88
VAPB-205ENST00000476395 BRAPQ7Z569 592 aa9.58□□□□□ -0.88
VAPB-205ENST00000476395 CEP120Q8N960 986 aa9.58□□□□□ -0.88
VAPB-205ENST00000476395 PHKBQ93100 1093 aa9.58□□□□□ -0.88
VAPB-205ENST00000476395 PNKPQ96T60 521 aa9.58□□□□□ -0.88
VAPB-205ENST00000476395 WNK3Q9BYP7 1800 aa9.58□□□□□ -0.88
VAPB-205ENST00000476395 DISP2A7MBM2 1401 aa9.58□□□□□ -0.88
VAPB-205ENST00000476395 WDR17Q8IZU2 1322 aa9.58□□□□□ -0.88
VAPB-205ENST00000476395 LAMB2P55268 1798 aa9.58□□□□□ -0.88
VAPB-205ENST00000476395 RREB1Q92766 1687 aa9.58□□□□□ -0.88
VAPB-205ENST00000476395 PSDA5PKW4 1024 aaPredicted RBP9.58□□□□□ -0.88
VAPB-205ENST00000476395 ERVV-2B6SEH9 535 aa9.58□□□□□ -0.88
VAPB-205ENST00000476395 GNG11P61952 73 aa9.58□□□□□ -0.88
VAPB-205ENST00000476395 ARMCX6Q7L4S7 300 aa9.58□□□□□ -0.88
VAPB-205ENST00000476395 APTXQ7Z2E3 356 aaKnown RBP9.58□□□□□ -0.88
VAPB-205ENST00000476395 VPS37DQ86XT2 251 aa9.58□□□□□ -0.88
VAPB-205ENST00000476395 SLAIN2Q9P270 581 aa9.58□□□□□ -0.88
VAPB-205ENST00000476395 CACNA1SQ13698 1873 aa9.58□□□□□ -0.88
VAPB-205ENST00000476395 SMIM22K7EJ46 135 aa9.58□□□□□ -0.88
VAPB-205ENST00000476395 KIF2AO00139 706 aaPredicted RBP9.58□□□□□ -0.88
VAPB-205ENST00000476395 FANCCQ00597 558 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms