RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 MEIS3P2A8K0S8 358 aa5.77□□□□□ -1.49
VPS13D-207ENST00000476169 TM4SF5O14894 197 aa5.77□□□□□ -1.49
VPS13D-207ENST00000476169 DDX3YO15523 660 aaKnown RBP5.77□□□□□ -1.49
VPS13D-207ENST00000476169 ADAM11O75078 769 aa5.77□□□□□ -1.49
VPS13D-207ENST00000476169 SLFN14P0C7P3 912 aa5.77□□□□□ -1.49
VPS13D-207ENST00000476169 NID1P14543 1247 aa5.77□□□□□ -1.49
VPS13D-207ENST00000476169 PLCG1P19174 1290 aa5.77□□□□□ -1.49
VPS13D-207ENST00000476169 PDE4BQ07343 736 aa5.77□□□□□ -1.49
VPS13D-207ENST00000476169 IFRD2Q12894 506 aaPredicted RBP5.77□□□□□ -1.49
VPS13D-207ENST00000476169 FOXD4L6Q3SYB3 417 aaPredicted RBP5.77□□□□□ -1.49
VPS13D-207ENST00000476169 CCDC181Q5TID7 509 aa5.77□□□□□ -1.49
VPS13D-207ENST00000476169 ZNF787Q6DD87 383 aa5.77□□□□□ -1.49
VPS13D-207ENST00000476169 FOXD4L3Q6VB84 417 aaPredicted RBP5.77□□□□□ -1.49
VPS13D-207ENST00000476169 CYFIP1Q7L576 1253 aa5.77□□□□□ -1.49
VPS13D-207ENST00000476169 TTC6Q86TZ1 520 aa5.77□□□□□ -1.49
VPS13D-207ENST00000476169 DCAF11Q8TEB1 546 aa5.77□□□□□ -1.49
VPS13D-207ENST00000476169 ZNF526Q8TF50 670 aaPredicted RBP5.77□□□□□ -1.49
VPS13D-207ENST00000476169 BRINP2Q9C0B6 783 aa5.77□□□□□ -1.49
VPS13D-207ENST00000476169 SPC25Q9HBM1 224 aa5.77□□□□□ -1.49
VPS13D-207ENST00000476169 PCDH12Q9NPG4 1184 aa5.77□□□□□ -1.49
VPS13D-207ENST00000476169 PICK1Q9NRD5 415 aa5.77□□□□□ -1.49
VPS13D-207ENST00000476169 LRRC4BQ9NT99 713 aa5.77□□□□□ -1.49
VPS13D-207ENST00000476169 GMIPQ9P107 970 aa5.77□□□□□ -1.49
VPS13D-207ENST00000476169 CSADQ9Y600 493 aa5.77□□□□□ -1.49
VPS13D-207ENST00000476169 A0A1W2PQH9 124 aa5.76□□□□□ -1.49
VPS13D-207ENST00000476169 ENPP3O14638 875 aa5.76□□□□□ -1.49
VPS13D-207ENST00000476169 PDPK1O15530 556 aa5.76□□□□□ -1.49
VPS13D-207ENST00000476169 AOC2O75106 756 aa5.76□□□□□ -1.49
VPS13D-207ENST00000476169 DDAH1O94760 285 aa5.76□□□□□ -1.49
VPS13D-207ENST00000476169 SLURP2P0DP57 97 aa5.76□□□□□ -1.49
VPS13D-207ENST00000476169 GUCY2CP25092 1073 aa5.76□□□□□ -1.49
VPS13D-207ENST00000476169 GRK4P32298 578 aa5.76□□□□□ -1.49
VPS13D-207ENST00000476169 ETF1P62495 437 aaKnown RBP5.76□□□□□ -1.49
VPS13D-207ENST00000476169 RASGRF1Q13972 1273 aa5.76□□□□□ -1.49
VPS13D-207ENST00000476169 HSP90AB2PQ58FF8 381 aa5.76□□□□□ -1.49
VPS13D-207ENST00000476169 TRAPPC3LQ5T215 181 aa5.76□□□□□ -1.49
VPS13D-207ENST00000476169 OVOS1Q6IE37 1185 aa5.76□□□□□ -1.49
VPS13D-207ENST00000476169 C12orf40Q86WS4 652 aa5.76□□□□□ -1.49
VPS13D-207ENST00000476169 DTWD1Q8N5C7 304 aa5.76□□□□□ -1.49
VPS13D-207ENST00000476169 ZSCAN1Q8NBB4 408 aa5.76□□□□□ -1.49
VPS13D-207ENST00000476169 UBASH3BQ8TF42 649 aa5.76□□□□□ -1.49
VPS13D-207ENST00000476169 RNPC3Q96LT9 517 aaKnown RBP5.76□□□□□ -1.49
VPS13D-207ENST00000476169 WDR18Q9BV38 432 aa5.76□□□□□ -1.49
VPS13D-207ENST00000476169 RAD18Q9NS91 495 aa5.76□□□□□ -1.49
VPS13D-207ENST00000476169 KCNK4Q9NYG8 393 aa5.76□□□□□ -1.49
VPS13D-207ENST00000476169 SLC22A31A6NKX4 558 aa5.75□□□□□ -1.49
VPS13D-207ENST00000476169 DEAF1O75398 565 aaPredicted RBP5.75□□□□□ -1.49
VPS13D-207ENST00000476169 GJB6O95452 261 aa5.75□□□□□ -1.49
VPS13D-207ENST00000476169 PARNO95453 639 aaKnown RBP5.75□□□□□ -1.49
VPS13D-207ENST00000476169 DLGAP3O95886 979 aa5.75□□□□□ -1.49
VPS13D-207ENST00000476169 PGRP06401 933 aa5.75□□□□□ -1.49
VPS13D-207ENST00000476169 CELA2BP08218 269 aaPredicted RBP5.75□□□□□ -1.49
VPS13D-207ENST00000476169 COL9A3Q14050 684 aaPredicted RBP5.75□□□□□ -1.49
VPS13D-207ENST00000476169 DUOXA2Q1HG44 320 aa5.75□□□□□ -1.49
VPS13D-207ENST00000476169 ZC3H12AQ5D1E8 599 aaKnown RBP5.75□□□□□ -1.49
VPS13D-207ENST00000476169 NLRC3Q7RTR2 1065 aa5.75□□□□□ -1.49
VPS13D-207ENST00000476169 DNAJC7Q99615 494 aa5.75□□□□□ -1.49
VPS13D-207ENST00000476169 KLHL3Q9UH77 587 aa5.75□□□□□ -1.49
VPS13D-207ENST00000476169 HIF3AQ9Y2N7 669 aa5.75□□□□□ -1.49
VPS13D-207ENST00000476169 SLC12A7Q9Y666 1083 aa5.75□□□□□ -1.49
VPS13D-207ENST00000476169 B2RBV5 119 aa5.74□□□□□ -1.49
VPS13D-207ENST00000476169 CDC45O75419 566 aa5.74□□□□□ -1.49
VPS13D-207ENST00000476169 S100BP04271 92 aaPredicted RBP5.74□□□□□ -1.49
VPS13D-207ENST00000476169 NME1P15531 152 aaKnown RBP5.74□□□□□ -1.49
VPS13D-207ENST00000476169 RAC1P63000 192 aa5.74□□□□□ -1.49
VPS13D-207ENST00000476169 ERVK-24P63145 666 aa5.74□□□□□ -1.49
VPS13D-207ENST00000476169 ID3Q02535 119 aa5.74□□□□□ -1.49
VPS13D-207ENST00000476169 MTERF2Q49AM1 385 aa5.74□□□□□ -1.49
VPS13D-207ENST00000476169 ARSHQ5FYA8 562 aa5.74□□□□□ -1.49
VPS13D-207ENST00000476169 AKAP4Q5JQC9 854 aa5.74□□□□□ -1.49
VPS13D-207ENST00000476169 PPM1JQ5JR12 505 aa5.74□□□□□ -1.49
VPS13D-207ENST00000476169 EXOSC6Q5RKV6 272 aaKnown RBP5.74□□□□□ -1.49
VPS13D-207ENST00000476169 TMEM201Q5SNT2 666 aa5.74□□□□□ -1.49
VPS13D-207ENST00000476169 LYPD4Q6UWN0 246 aa5.74□□□□□ -1.49
VPS13D-207ENST00000476169 C6orf15Q6UXA7 325 aaPredicted RBP5.74□□□□□ -1.49
VPS13D-207ENST00000476169 ILDR2Q71H61 639 aa5.74□□□□□ -1.49
VPS13D-207ENST00000476169 FAM178BQ8IXR5 827 aa5.74□□□□□ -1.49
VPS13D-207ENST00000476169 TAB3Q8N5C8 712 aaPredicted RBP5.74□□□□□ -1.49
VPS13D-207ENST00000476169 SH3TC2Q8TF17 1288 aa5.74□□□□□ -1.49
VPS13D-207ENST00000476169 ATG4CQ96DT6 458 aa5.74□□□□□ -1.49
VPS13D-207ENST00000476169 WNT10AQ9GZT5 417 aa5.74□□□□□ -1.49
VPS13D-207ENST00000476169 RRAGCQ9HB90 399 aa5.74□□□□□ -1.49
VPS13D-207ENST00000476169 ADAM30Q9UKF2 790 aa5.74□□□□□ -1.49
VPS13D-207ENST00000476169 G3BP2Q9UN86 482 aaKnown RBP5.74□□□□□ -1.49
VPS13D-207ENST00000476169 SUGT1Q9Y2Z0 365 aa5.74□□□□□ -1.49
VPS13D-207ENST00000476169 PCDHGC5Q9Y5F6 944 aa5.74□□□□□ -1.49
VPS13D-207ENST00000476169 PLEKHD1A6NEE1 506 aa5.73□□□□□ -1.49
VPS13D-207ENST00000476169 FAM86C2PA6NEL3 165 aa5.73□□□□□ -1.49
VPS13D-207ENST00000476169 DNAJA2O60884 412 aa5.73□□□□□ -1.49
VPS13D-207ENST00000476169 DGKGP49619 791 aa5.73□□□□□ -1.49
VPS13D-207ENST00000476169 UNC5AQ6ZN44 842 aa5.73□□□□□ -1.49
VPS13D-207ENST00000476169 FBXO11Q86XK2 927 aa5.73□□□□□ -1.49
VPS13D-207ENST00000476169 LILRB2Q8N423 598 aa5.73□□□□□ -1.49
VPS13D-207ENST00000476169 RUSC1Q9BVN2 902 aa5.73□□□□□ -1.49
VPS13D-207ENST00000476169 MYH16Q9H6N6 1097 aa5.73□□□□□ -1.49
VPS13D-207ENST00000476169 CNNM2Q9H8M5 875 aa5.73□□□□□ -1.49
VPS13D-207ENST00000476169 FANCLQ9NW38 375 aa5.73□□□□□ -1.49
VPS13D-207ENST00000476169 CHPF2Q9P2E5 772 aa5.73□□□□□ -1.49
VPS13D-207ENST00000476169 SYNGAP1Q96PV0 1343 aa5.73□□□□□ -1.49
VPS13D-207ENST00000476169 CHURC1-FNTBB4DL54 471 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms