RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 TTLL3Q9Y4R7 772 aa12.25□□□□□ -0.45
VAPB-204ENST00000475243 CALUO43852 315 aaPredicted RBP12.25□□□□□ -0.45
VAPB-204ENST00000475243 SLC8A3P57103 927 aa12.25□□□□□ -0.45
VAPB-204ENST00000475243 DAAM2Q86T65 1068 aa12.25□□□□□ -0.45
VAPB-204ENST00000475243 MYCT1Q8N699 235 aa12.25□□□□□ -0.45
VAPB-204ENST00000475243 FAM204AQ9H8W3 233 aa12.25□□□□□ -0.45
VAPB-204ENST00000475243 EIF2AK4Q9P2K8 1649 aaKnown RBP12.25□□□□□ -0.45
VAPB-204ENST00000475243 CCT6BQ92526 530 aa12.25□□□□□ -0.45
VAPB-204ENST00000475243 RABEP2Q9H5N1 569 aa12.25□□□□□ -0.45
VAPB-204ENST00000475243 PFDN4Q9NQP4 134 aa12.25□□□□□ -0.45
VAPB-204ENST00000475243 YTHDC2Q9H6S0 1430 aaKnown RBP12.25□□□□□ -0.45
VAPB-204ENST00000475243 EBAG9O00559 213 aa12.25□□□□□ -0.45
VAPB-204ENST00000475243 SLC1A4P43007 532 aa12.25□□□□□ -0.45
VAPB-204ENST00000475243 INTS4Q96HW7 963 aaKnown RBP12.25□□□□□ -0.45
VAPB-204ENST00000475243 CFBP00751 764 aa12.24□□□□□ -0.45
VAPB-204ENST00000475243 KRT19P08727 400 aa12.24□□□□□ -0.45
VAPB-204ENST00000475243 MAPKAPK5Q8IW41 473 aa12.24□□□□□ -0.45
VAPB-204ENST00000475243 KCNJ14Q9UNX9 436 aa12.24□□□□□ -0.45
VAPB-204ENST00000475243 SH3TC1Q8TE82 1336 aa12.24□□□□□ -0.45
VAPB-204ENST00000475243 H0YIN7 160 aa12.24□□□□□ -0.45
VAPB-204ENST00000475243 CALCRLQ16602 461 aa12.24□□□□□ -0.45
VAPB-204ENST00000475243 LARGE2Q8N3Y3 721 aa12.24□□□□□ -0.45
VAPB-204ENST00000475243 RDH13Q8NBN7 331 aa12.24□□□□□ -0.45
VAPB-204ENST00000475243 SYNRGQ9UMZ2 1314 aa12.24□□□□□ -0.45
VAPB-204ENST00000475243 EVCP57679 992 aa12.24□□□□□ -0.45
VAPB-204ENST00000475243 GABPAQ06546 454 aa12.24□□□□□ -0.45
VAPB-204ENST00000475243 MRPL44Q9H9J2 332 aaKnown RBP12.24□□□□□ -0.45
VAPB-204ENST00000475243 FAM47AQ5JRC9 791 aa12.24□□□□□ -0.45
VAPB-204ENST00000475243 CMTR1Q8N1G2 835 aaKnown RBP12.24□□□□□ -0.45
VAPB-204ENST00000475243 KIAA1524Q8TCG1 905 aa12.24□□□□□ -0.45
VAPB-204ENST00000475243 APPBP2Q92624 585 aa12.24□□□□□ -0.45
VAPB-204ENST00000475243 TMEM87BQ96K49 555 aa12.24□□□□□ -0.45
VAPB-204ENST00000475243 ZMYND15Q9H091 742 aa12.24□□□□□ -0.45
VAPB-204ENST00000475243 EIF4G3O43432 1585 aaKnown RBP12.24□□□□□ -0.45
VAPB-204ENST00000475243 RILPL1Q5EBL4 403 aa12.24□□□□□ -0.45
VAPB-204ENST00000475243 PLEKHA4Q9H4M7 779 aa12.24□□□□□ -0.45
VAPB-204ENST00000475243 HSPA1LP34931 641 aa12.24□□□□□ -0.45
VAPB-204ENST00000475243 NACA2Q9H009 215 aa12.24□□□□□ -0.45
VAPB-204ENST00000475243 CLSTN2Q9H4D0 955 aa12.24□□□□□ -0.45
VAPB-204ENST00000475243 UTP11Q9Y3A2 253 aaKnown RBP12.24□□□□□ -0.45
VAPB-204ENST00000475243 SNX14Q9Y5W7 946 aa12.24□□□□□ -0.45
VAPB-204ENST00000475243 HERC4Q5GLZ8 1057 aaPredicted RBP12.24□□□□□ -0.45
VAPB-204ENST00000475243 TTC38Q5R3I4 469 aa12.24□□□□□ -0.45
VAPB-204ENST00000475243 SMC5Q8IY18 1101 aa12.24□□□□□ -0.45
VAPB-204ENST00000475243 ORAI2Q96SN7 254 aa12.24□□□□□ -0.45
VAPB-204ENST00000475243 SAMD15Q9P1V8 674 aa12.24□□□□□ -0.45
VAPB-204ENST00000475243 NELFCDQ8IXH7 590 aa12.23□□□□□ -0.45
VAPB-204ENST00000475243 ZNF202O95125 648 aa12.23□□□□□ -0.45
VAPB-204ENST00000475243 GTF2A1P52655 376 aaPredicted RBP12.23□□□□□ -0.45
VAPB-204ENST00000475243 IVNS1ABPQ9Y6Y0 642 aa12.23□□□□□ -0.45
VAPB-204ENST00000475243 HAUS3Q68CZ6 603 aa12.23□□□□□ -0.45
VAPB-204ENST00000475243 FAM76AQ8TAV0 307 aa12.23□□□□□ -0.45
VAPB-204ENST00000475243 SNX29Q8TEQ0 813 aa12.23□□□□□ -0.45
VAPB-204ENST00000475243 ZNF532Q9HCE3 1301 aa12.23□□□□□ -0.45
VAPB-204ENST00000475243 PNMA6EA0A0J9YXQ4 647 aa12.23□□□□□ -0.45
VAPB-204ENST00000475243 SUCLG2Q96I99 432 aa12.23□□□□□ -0.45
VAPB-204ENST00000475243 GTPBP4Q9BZE4 634 aaKnown RBP12.23□□□□□ -0.45
VAPB-204ENST00000475243 HDXQ7Z353 690 aa12.23□□□□□ -0.45
VAPB-204ENST00000475243 BLZF1Q9H2G9 400 aa12.23□□□□□ -0.45
VAPB-204ENST00000475243 POLR3AO14802 1390 aaPredicted RBP12.23□□□□□ -0.45
VAPB-204ENST00000475243 ZAP70P43403 619 aa12.23□□□□□ -0.45
VAPB-204ENST00000475243 VPS54Q9P1Q0 977 aa12.23□□□□□ -0.45
VAPB-204ENST00000475243 NBPF11Q86T75 865 aa12.22□□□□□ -0.45
VAPB-204ENST00000475243 GPR161Q8N6U8 529 aaKnown RBP12.22□□□□□ -0.45
VAPB-204ENST00000475243 WDR66Q8TBY9 1149 aa12.22□□□□□ -0.45
VAPB-204ENST00000475243 CFAP57Q96MR6 1250 aa12.22□□□□□ -0.45
VAPB-204ENST00000475243 CLCN1P35523 988 aa12.22□□□□□ -0.45
VAPB-204ENST00000475243 PAK1Q13153 545 aa12.22□□□□□ -0.45
VAPB-204ENST00000475243 DIS3L2Q8IYB7 885 aaKnown RBP12.22□□□□□ -0.45
VAPB-204ENST00000475243 NAP1L3Q99457 506 aaPredicted RBP12.22□□□□□ -0.45
VAPB-204ENST00000475243 MYO1AQ9UBC5 1043 aa12.22□□□□□ -0.45
VAPB-204ENST00000475243 DNM3Q9UQ16 869 aa12.22□□□□□ -0.45
VAPB-204ENST00000475243 CYP26C1Q6V0L0 522 aa12.22□□□□□ -0.45
VAPB-204ENST00000475243 CASC4Q6P4E1 433 aa12.22□□□□□ -0.45
VAPB-204ENST00000475243 NSMFQ6X4W1 530 aa12.22□□□□□ -0.45
VAPB-204ENST00000475243 RBSNQ9H1K0 784 aa12.22□□□□□ -0.45
VAPB-204ENST00000475243 STK32BQ9NY57 414 aa12.22□□□□□ -0.45
VAPB-204ENST00000475243 CETN3O15182 167 aa12.22□□□□□ -0.45
VAPB-204ENST00000475243 SETDB1Q15047 1291 aa12.22□□□□□ -0.45
VAPB-204ENST00000475243 NKIRAS1Q9NYS0 192 aa12.22□□□□□ -0.45
VAPB-204ENST00000475243 JAK2O60674 1132 aa12.22□□□□□ -0.45
VAPB-204ENST00000475243 VPS52Q8N1B4 723 aa12.22□□□□□ -0.45
VAPB-204ENST00000475243 SPATA5Q8NB90 893 aa12.22□□□□□ -0.45
VAPB-204ENST00000475243 ATP10BO94823 1461 aa12.22□□□□□ -0.45
VAPB-204ENST00000475243 GMNNO75496 209 aa12.21□□□□□ -0.45
VAPB-204ENST00000475243 FANCCQ00597 558 aa12.21□□□□□ -0.45
VAPB-204ENST00000475243 ITIH3Q06033 890 aa12.21□□□□□ -0.45
VAPB-204ENST00000475243 LRMPQ12912 555 aa12.21□□□□□ -0.45
VAPB-204ENST00000475243 EAPPQ56P03 285 aaPredicted RBP12.21□□□□□ -0.45
VAPB-204ENST00000475243 TPH2Q8IWU9 490 aa12.21□□□□□ -0.45
VAPB-204ENST00000475243 C17orf53Q8N3J3 647 aaPredicted RBP12.21□□□□□ -0.45
VAPB-204ENST00000475243 INTS8Q75QN2 995 aaKnown RBP12.21□□□□□ -0.45
VAPB-204ENST00000475243 EPSTI1Q96J88 318 aa12.21□□□□□ -0.45
VAPB-204ENST00000475243 NAP1L4Q99733 375 aaKnown RBP12.21□□□□□ -0.45
VAPB-204ENST00000475243 NAPGQ99747 312 aaPredicted RBP12.21□□□□□ -0.45
VAPB-204ENST00000475243 TAB2Q9NYJ8 693 aa12.21□□□□□ -0.45
VAPB-204ENST00000475243 PARD3Q8TEW0 1356 aa12.21□□□□□ -0.45
VAPB-204ENST00000475243 RAD50Q92878 1312 aa12.21□□□□□ -0.45
VAPB-204ENST00000475243 U2AF2P26368 475 aaKnown RBP eCLIP12.21□□□□□ -0.452e-6■□□□□ 9.4
VAPB-204ENST00000475243 SPOUT1Q5T280 376 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms