RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 COX10Q12887 443 aa5.61□□□□□ -1.51
NPHP3-206ENST00000474871 SP140Q13342 867 aa5.61□□□□□ -1.51
NPHP3-206ENST00000474871 PDILTQ8N807 584 aa5.61□□□□□ -1.51
NPHP3-206ENST00000474871 XAGE2Q96GT9 111 aa5.61□□□□□ -1.51
NPHP3-206ENST00000474871 CPSF2Q9P2I0 782 aaKnown RBP5.61□□□□□ -1.51
NPHP3-206ENST00000474871 LZTS1Q9Y250 596 aa5.61□□□□□ -1.51
NPHP3-206ENST00000474871 ARHGEF28Q8N1W1 1705 aaKnown RBP5.61□□□□□ -1.51
NPHP3-206ENST00000474871 KTN1Q86UP2 1357 aaKnown RBP5.61□□□□□ -1.51
NPHP3-206ENST00000474871 RNGTTO60942 597 aaKnown RBP5.61□□□□□ -1.51
NPHP3-206ENST00000474871 USP2O75604 605 aaPredicted RBP5.61□□□□□ -1.51
NPHP3-206ENST00000474871 CRYMQ14894 314 aa5.61□□□□□ -1.51
NPHP3-206ENST00000474871 SEPT2Q15019 361 aa5.61□□□□□ -1.51
NPHP3-206ENST00000474871 TMEM95Q3KNT9 176 aa5.61□□□□□ -1.51
NPHP3-206ENST00000474871 TAOK1Q7L7X3 1001 aa5.61□□□□□ -1.51
NPHP3-206ENST00000474871 SPATS2Q86XZ4 545 aaKnown RBP5.61□□□□□ -1.51
NPHP3-206ENST00000474871 BICD2Q8TD16 824 aa5.61□□□□□ -1.51
NPHP3-206ENST00000474871 ALPK1Q96QP1 1244 aa5.61□□□□□ -1.51
NPHP3-206ENST00000474871 SLC5A4Q9NY91 659 aa5.61□□□□□ -1.51
NPHP3-206ENST00000474871 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.61□□□□□ -1.51
NPHP3-206ENST00000474871 BTBD11A6QL63 1104 aa5.61□□□□□ -1.51
NPHP3-206ENST00000474871 GNRH1P01148 92 aa5.61□□□□□ -1.51
NPHP3-206ENST00000474871 FUT4P22083 530 aa5.61□□□□□ -1.51
NPHP3-206ENST00000474871 TMF1P82094 1093 aa5.61□□□□□ -1.51
NPHP3-206ENST00000474871 TTC31Q49AM3 519 aaPredicted RBP5.61□□□□□ -1.51
NPHP3-206ENST00000474871 PABPC1LQ4VXU2 614 aaKnown RBP5.61□□□□□ -1.51
NPHP3-206ENST00000474871 CHADLQ6NUI6 762 aa5.61□□□□□ -1.51
NPHP3-206ENST00000474871 ATP11CQ8NB49 1132 aa5.61□□□□□ -1.51
NPHP3-206ENST00000474871 RSAD2Q8WXG1 361 aa5.61□□□□□ -1.51
NPHP3-206ENST00000474871 ZC3H7BQ9UGR2 993 aaKnown RBP5.61□□□□□ -1.51
NPHP3-206ENST00000474871 AATKQ6ZMQ8 1374 aa5.61□□□□□ -1.51
NPHP3-206ENST00000474871 MBD4O95243 580 aa5.6□□□□□ -1.51
NPHP3-206ENST00000474871 MYCP01106 439 aaPredicted RBP5.6□□□□□ -1.51
NPHP3-206ENST00000474871 HMGB2P26583 209 aaKnown RBP5.6□□□□□ -1.51
NPHP3-206ENST00000474871 ELF1P32519 619 aa5.6□□□□□ -1.51
NPHP3-206ENST00000474871 C10orf76Q5T2E6 689 aa5.6□□□□□ -1.51
NPHP3-206ENST00000474871 PPFIBP1Q86W92 1011 aa5.6□□□□□ -1.51
NPHP3-206ENST00000474871 CERKQ8TCT0 537 aa5.6□□□□□ -1.51
NPHP3-206ENST00000474871 MAELQ96JY0 434 aaKnown RBP5.6□□□□□ -1.51
NPHP3-206ENST00000474871 ZFYVE9O95405 1425 aa5.6□□□□□ -1.51
NPHP3-206ENST00000474871 M0R2C6 588 aa5.6□□□□□ -1.51
NPHP3-206ENST00000474871 SESN3P58005 492 aa5.6□□□□□ -1.51
NPHP3-206ENST00000474871 FKBP5Q13451 457 aaPredicted RBP5.6□□□□□ -1.51
NPHP3-206ENST00000474871 COG2Q14746 738 aa5.6□□□□□ -1.51
NPHP3-206ENST00000474871 TAF1CQ15572 869 aaPredicted RBP5.6□□□□□ -1.51
NPHP3-206ENST00000474871 BEND6Q5SZJ8 279 aaPredicted RBP5.6□□□□□ -1.51
NPHP3-206ENST00000474871 CFAP70Q5T0N1 1121 aa5.6□□□□□ -1.51
NPHP3-206ENST00000474871 ATF7IPQ6VMQ6 1270 aa5.6□□□□□ -1.51
NPHP3-206ENST00000474871 TTLL7Q6ZT98 887 aa5.6□□□□□ -1.51
NPHP3-206ENST00000474871 HDGFL2Q7Z4V5 671 aaPredicted RBP5.6□□□□□ -1.51
NPHP3-206ENST00000474871 ANKRD49Q8WVL7 239 aa5.6□□□□□ -1.51
NPHP3-206ENST00000474871 TTC12Q9H892 705 aaPredicted RBP5.6□□□□□ -1.51
NPHP3-206ENST00000474871 TPCN1Q9ULQ1 816 aa5.6□□□□□ -1.51
NPHP3-206ENST00000474871 ZNF536O15090 1300 aa5.6□□□□□ -1.51
NPHP3-206ENST00000474871 TNFRSF10BO14763 440 aa5.6□□□□□ -1.51
NPHP3-206ENST00000474871 SMC2O95347 1197 aa5.6□□□□□ -1.51
NPHP3-206ENST00000474871 ALDH2P05091 517 aa5.6□□□□□ -1.51
NPHP3-206ENST00000474871 TNNT3P45378 269 aaPredicted RBP5.6□□□□□ -1.51
NPHP3-206ENST00000474871 UBASH3AP57075 661 aa5.6□□□□□ -1.51
NPHP3-206ENST00000474871 CACNB1Q02641 598 aaPredicted RBP5.6□□□□□ -1.51
NPHP3-206ENST00000474871 PLOD1Q02809 727 aaPredicted RBP5.6□□□□□ -1.51
NPHP3-206ENST00000474871 POU5F1BQ06416 359 aa5.6□□□□□ -1.51
NPHP3-206ENST00000474871 C11orf74Q86VG3 221 aa5.6□□□□□ -1.51
NPHP3-206ENST00000474871 TSR2Q969E8 191 aaKnown RBP5.6□□□□□ -1.51
NPHP3-206ENST00000474871 SRPK1Q96SB4 655 aaKnown RBP5.6□□□□□ -1.51
NPHP3-206ENST00000474871 UTP14AQ9BVJ6 771 aaKnown RBP5.6□□□□□ -1.51
NPHP3-206ENST00000474871 KIF9Q9HAQ2 790 aa5.6□□□□□ -1.51
NPHP3-206ENST00000474871 INIPQ9NRY2 104 aa5.6□□□□□ -1.51
NPHP3-206ENST00000474871 TRPC6Q9Y210 931 aa5.6□□□□□ -1.51
NPHP3-206ENST00000474871 ASXL1Q8IXJ9 1541 aa5.6□□□□□ -1.51
NPHP3-206ENST00000474871 ENDOUP21128 410 aaKnown RBP5.6□□□□□ -1.51
NPHP3-206ENST00000474871 TAF11Q15544 211 aa5.6□□□□□ -1.51
NPHP3-206ENST00000474871 PROSER2Q86WR7 435 aaPredicted RBP5.6□□□□□ -1.51
NPHP3-206ENST00000474871 GOLGA5Q8TBA6 731 aa5.6□□□□□ -1.51
NPHP3-206ENST00000474871 ZSWIM6Q9HCJ5 1215 aa5.6□□□□□ -1.51
NPHP3-206ENST00000474871 PCDH12Q9NPG4 1184 aa5.6□□□□□ -1.51
NPHP3-206ENST00000474871 ASAP1Q9ULH1 1129 aa5.6□□□□□ -1.51
NPHP3-206ENST00000474871 PARD3Q8TEW0 1356 aa5.6□□□□□ -1.51
NPHP3-206ENST00000474871 LOC105371267A0A1B0GV96 52 aa5.59□□□□□ -1.51
NPHP3-206ENST00000474871 A0A1B0GVG6 124 aa5.59□□□□□ -1.51
NPHP3-206ENST00000474871 POU3F3P20264 500 aaPredicted RBP5.59□□□□□ -1.51
NPHP3-206ENST00000474871 GPTP24298 496 aa5.59□□□□□ -1.51
NPHP3-206ENST00000474871 TAGLNQ01995 201 aaKnown RBP5.59□□□□□ -1.51
NPHP3-206ENST00000474871 GBE1Q04446 702 aa5.59□□□□□ -1.51
NPHP3-206ENST00000474871 OLFML1Q6UWY5 402 aa5.59□□□□□ -1.51
NPHP3-206ENST00000474871 PEX5LQ8IYB4 626 aa5.59□□□□□ -1.51
NPHP3-206ENST00000474871 CHCHD4Q8N4Q1 142 aa5.59□□□□□ -1.51
NPHP3-206ENST00000474871 RUNDC1Q96C34 613 aa5.59□□□□□ -1.51
NPHP3-206ENST00000474871 NTPCRQ9BSD7 190 aaKnown RBP5.59□□□□□ -1.51
NPHP3-206ENST00000474871 BEGAINQ9BUH8 593 aa5.59□□□□□ -1.51
NPHP3-206ENST00000474871 TRIM6Q9C030 488 aaPredicted RBP5.59□□□□□ -1.51
NPHP3-206ENST00000474871 A0A1W2PQ67 120 aa5.59□□□□□ -1.51
NPHP3-206ENST00000474871 TBC1D12O60347 775 aa5.59□□□□□ -1.51
NPHP3-206ENST00000474871 RPS6KA5O75582 802 aa5.59□□□□□ -1.51
NPHP3-206ENST00000474871 B3GALNT1O75752 331 aa5.59□□□□□ -1.51
NPHP3-206ENST00000474871 SKIV2L2P42285 1042 aaKnown RBP5.59□□□□□ -1.51
NPHP3-206ENST00000474871 DDR1Q08345 913 aa5.59□□□□□ -1.51
NPHP3-206ENST00000474871 FAM81AQ8TBF8 368 aa5.59□□□□□ -1.51
NPHP3-206ENST00000474871 RMDN2Q96LZ7 410 aa5.59□□□□□ -1.51
NPHP3-206ENST00000474871 UPF3BQ9BZI7 483 aaKnown RBP5.59□□□□□ -1.51
NPHP3-206ENST00000474871 C14orf93Q9H972 538 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms