RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 EHD4Q9H223 541 aa18.86■□□□□ 0.61
COL1A1-204ENST00000474644 IL25Q9H293 177 aa18.86■□□□□ 0.61
COL1A1-204ENST00000474644 HERC5Q9UII4 1024 aaKnown RBP18.86■□□□□ 0.61
COL1A1-204ENST00000474644 PATL2C9JE40 543 aaKnown RBP18.85■□□□□ 0.61
COL1A1-204ENST00000474644 APPP05067 770 aa18.85■□□□□ 0.61
COL1A1-204ENST00000474644 POLR3DP05423 398 aaPredicted RBP18.85■□□□□ 0.61
COL1A1-204ENST00000474644 TDO2P48775 406 aa18.85■□□□□ 0.61
COL1A1-204ENST00000474644 PLCD1P51178 756 aa18.85■□□□□ 0.61
COL1A1-204ENST00000474644 METTL16Q86W50 562 aaKnown RBP18.85■□□□□ 0.61
COL1A1-204ENST00000474644 JMYQ8N9B5 988 aa18.85■□□□□ 0.61
COL1A1-204ENST00000474644 DNAJC18Q9H819 358 aa18.85■□□□□ 0.61
COL1A1-204ENST00000474644 ARPP21Q9UBL0 812 aaPredicted RBP18.85■□□□□ 0.61
COL1A1-204ENST00000474644 ZNF112Q9UJU3 913 aa18.85■□□□□ 0.61
COL1A1-204ENST00000474644 GTF3C3Q9Y5Q9 886 aa18.85■□□□□ 0.61
COL1A1-204ENST00000474644 CYP2D7A0A087X1C5 515 aa18.84■□□□□ 0.61
COL1A1-204ENST00000474644 USP17L12C9JPN9 530 aa18.84■□□□□ 0.61
COL1A1-204ENST00000474644 USP17L21D6R901 530 aa18.84■□□□□ 0.61
COL1A1-204ENST00000474644 MFAP1P55081 439 aaKnown RBP18.84■□□□□ 0.61
COL1A1-204ENST00000474644 CTR9Q6PD62 1173 aa18.84■□□□□ 0.61
COL1A1-204ENST00000474644 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.84■□□□□ 0.61
COL1A1-204ENST00000474644 FOXP4Q8IVH2 680 aaPredicted RBP18.84■□□□□ 0.61
COL1A1-204ENST00000474644 ANKRD13AQ8IZ07 590 aa18.84■□□□□ 0.61
COL1A1-204ENST00000474644 IFNL3Q8IZI9 196 aa18.84■□□□□ 0.61
COL1A1-204ENST00000474644 CRACR2BQ8N4Y2 399 aaPredicted RBP18.84■□□□□ 0.61
COL1A1-204ENST00000474644 CLMNQ96JQ2 1002 aa18.84■□□□□ 0.61
COL1A1-204ENST00000474644 NACAP1Q9BZK3 213 aa18.84■□□□□ 0.61
COL1A1-204ENST00000474644 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.84■□□□□ 0.61
COL1A1-204ENST00000474644 SERPINB13Q9UIV8 391 aa18.84■□□□□ 0.61
COL1A1-204ENST00000474644 BAZ2AQ9UIF9 1905 aaKnown RBP18.83■□□□□ 0.6
COL1A1-204ENST00000474644 UNCXA6NJT0 531 aa18.83■□□□□ 0.6
COL1A1-204ENST00000474644 PHF20L1A8MW92 1017 aa18.83■□□□□ 0.6
COL1A1-204ENST00000474644 INPP5BP32019 993 aa18.83■□□□□ 0.6
COL1A1-204ENST00000474644 MAP3K9P80192 1104 aa18.83■□□□□ 0.6
COL1A1-204ENST00000474644 VGLL4Q14135 290 aa18.83■□□□□ 0.6
COL1A1-204ENST00000474644 DEFB115Q30KQ5 88 aa18.83■□□□□ 0.6
COL1A1-204ENST00000474644 C12orf60Q5U649 245 aa18.83■□□□□ 0.6
COL1A1-204ENST00000474644 RGMBQ6NW40 437 aa18.83■□□□□ 0.6
COL1A1-204ENST00000474644 PAXIP1Q6ZW49 1069 aaPredicted RBP18.83■□□□□ 0.6
COL1A1-204ENST00000474644 AMOTL1Q8IY63 956 aa18.83■□□□□ 0.6
COL1A1-204ENST00000474644 TRIM34Q9BYJ4 488 aa18.83■□□□□ 0.6
COL1A1-204ENST00000474644 LAMB1P07942 1786 aa18.83■□□□□ 0.6
COL1A1-204ENST00000474644 HSPD1P10809 573 aaKnown RBP18.82■□□□□ 0.6
COL1A1-204ENST00000474644 SBK1Q52WX2 424 aa18.82■□□□□ 0.6
COL1A1-204ENST00000474644 RUFY2Q8WXA3 655 aa18.82■□□□□ 0.6
COL1A1-204ENST00000474644 ZKSCAN4Q969J2 545 aaPredicted RBP18.82■□□□□ 0.6
COL1A1-204ENST00000474644 NAPBQ9H115 298 aa18.82■□□□□ 0.6
COL1A1-204ENST00000474644 SNCAIPQ9Y6H5 919 aa18.82■□□□□ 0.6
COL1A1-204ENST00000474644 ROBO3Q96MS0 1386 aa18.81■□□□□ 0.6
COL1A1-204ENST00000474644 ZMYM6O95789 1325 aa18.81■□□□□ 0.6
COL1A1-204ENST00000474644 SMIM22K7EJ46 135 aa18.81■□□□□ 0.6
COL1A1-204ENST00000474644 SGSM2O43147 1006 aa18.81■□□□□ 0.6
COL1A1-204ENST00000474644 CDC45O75419 566 aa18.81■□□□□ 0.6
COL1A1-204ENST00000474644 ZNF157P51786 506 aaPredicted RBP18.81■□□□□ 0.6
COL1A1-204ENST00000474644 GABPAQ06546 454 aa18.81■□□□□ 0.6
COL1A1-204ENST00000474644 NOL9Q5SY16 702 aaKnown RBP18.81■□□□□ 0.6
COL1A1-204ENST00000474644 CYP4F22Q6NT55 531 aa18.81■□□□□ 0.6
COL1A1-204ENST00000474644 RASAL3Q86YV0 1011 aa18.81■□□□□ 0.6
COL1A1-204ENST00000474644 ELP3Q9H9T3 547 aa18.81■□□□□ 0.6
COL1A1-204ENST00000474644 CSADQ9Y600 493 aa18.81■□□□□ 0.6
COL1A1-204ENST00000474644 SLC10A3P09131 477 aa18.8■□□□□ 0.6
COL1A1-204ENST00000474644 RRP1BQ14684 758 aaKnown RBP18.8■□□□□ 0.6
COL1A1-204ENST00000474644 DYNLL2Q96FJ2 89 aa18.8■□□□□ 0.6
COL1A1-204ENST00000474644 CAPNS2Q96L46 248 aa18.8■□□□□ 0.6
COL1A1-204ENST00000474644 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.8■□□□□ 0.6
COL1A1-204ENST00000474644 THSD7BQ9C0I4 1608 aa18.79■□□□□ 0.6
COL1A1-204ENST00000474644 MINDY4BA8MYZ0 360 aa18.79■□□□□ 0.6
COL1A1-204ENST00000474644 FAM155AB1AL88 458 aaPredicted RBP18.79■□□□□ 0.6
COL1A1-204ENST00000474644 CTNND1O60716 968 aaKnown RBP18.79■□□□□ 0.6
COL1A1-204ENST00000474644 SHMT1P34896 483 aa18.79■□□□□ 0.6
COL1A1-204ENST00000474644 VEGFBP49765 207 aa18.79■□□□□ 0.6
COL1A1-204ENST00000474644 GRM1Q13255 1194 aa18.79■□□□□ 0.6
COL1A1-204ENST00000474644 ALX1Q15699 326 aa18.79■□□□□ 0.6
COL1A1-204ENST00000474644 TATDN1Q6P1N9 297 aa18.79■□□□□ 0.6
COL1A1-204ENST00000474644 C16orf86Q6ZW13 317 aa18.79■□□□□ 0.6
COL1A1-204ENST00000474644 SCYL3Q8IZE3 742 aa18.79■□□□□ 0.6
COL1A1-204ENST00000474644 SLC44A5Q8NCS7 719 aa18.79■□□□□ 0.6
COL1A1-204ENST00000474644 SLC10A4Q96EP9 437 aa18.79■□□□□ 0.6
COL1A1-204ENST00000474644 ESYT1Q9BSJ8 1104 aa18.79■□□□□ 0.6
COL1A1-204ENST00000474644 TAOK2Q9UL54 1235 aa18.79■□□□□ 0.6
COL1A1-204ENST00000474644 DOCK1Q14185 1865 aa18.79■□□□□ 0.6
COL1A1-204ENST00000474644 FGAP02671 866 aa18.78■□□□□ 0.6
COL1A1-204ENST00000474644 ECE1P42892 770 aa18.78■□□□□ 0.6
COL1A1-204ENST00000474644 PPARAQ07869 468 aa18.78■□□□□ 0.6
COL1A1-204ENST00000474644 CCDC102AQ96A19 550 aa18.78■□□□□ 0.6
COL1A1-204ENST00000474644 DSCC1Q9BVC3 393 aa18.78■□□□□ 0.6
COL1A1-204ENST00000474644 SWAP70Q9UH65 585 aa18.78■□□□□ 0.6
COL1A1-204ENST00000474644 WDR33Q9C0J8 1336 aaKnown RBP18.77■□□□□ 0.6
COL1A1-204ENST00000474644 SPDYE5A6NIY4 337 aa18.77■□□□□ 0.6
COL1A1-204ENST00000474644 GDF11O95390 407 aa18.77■□□□□ 0.6
COL1A1-204ENST00000474644 CAP2P40123 477 aa18.77■□□□□ 0.6
COL1A1-204ENST00000474644 CASC1Q6TDU7 716 aa18.77■□□□□ 0.6
COL1A1-204ENST00000474644 CNKSR2Q8WXI2 1034 aa18.77■□□□□ 0.6
COL1A1-204ENST00000474644 WNK4Q96J92 1243 aa18.77■□□□□ 0.6
COL1A1-204ENST00000474644 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.77■□□□□ 0.6
COL1A1-204ENST00000474644 GJA5P36382 358 aa18.76■□□□□ 0.59
COL1A1-204ENST00000474644 CDK8P49336 464 aa18.76■□□□□ 0.59
COL1A1-204ENST00000474644 JAG1P78504 1218 aa18.76■□□□□ 0.59
COL1A1-204ENST00000474644 SHROOM1Q2M3G4 852 aaPredicted RBP18.76■□□□□ 0.59
COL1A1-204ENST00000474644 SPRYD7Q5W111 196 aa18.76■□□□□ 0.59
COL1A1-204ENST00000474644 ERO1BQ86YB8 467 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms