RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 MPSTP25325 297 aa9.61□□□□□ -0.87
VPS50-211ENST00000474412 NOM1Q5C9Z4 860 aaKnown RBP9.61□□□□□ -0.87
VPS50-211ENST00000474412 PSAPL1Q6NUJ1 521 aa9.61□□□□□ -0.87
VPS50-211ENST00000474412 C8orf86Q6ZUL3 223 aa9.61□□□□□ -0.87
VPS50-211ENST00000474412 KCTD17Q8N5Z5 321 aa9.61□□□□□ -0.87
VPS50-211ENST00000474412 ACSBG1Q96GR2 724 aa9.61□□□□□ -0.87
VPS50-211ENST00000474412 COL5A3P25940 1745 aaPredicted RBP9.61□□□□□ -0.87
VPS50-211ENST00000474412 NSD2O96028 1365 aa9.61□□□□□ -0.87
VPS50-211ENST00000474412 SMG6Q86US8 1419 aaKnown RBP9.6□□□□□ -0.87
VPS50-211ENST00000474412 MMP20O60882 483 aa9.6□□□□□ -0.87
VPS50-211ENST00000474412 LILRB5O75023 590 aa9.6□□□□□ -0.87
VPS50-211ENST00000474412 IL2RBP14784 551 aa9.6□□□□□ -0.87
VPS50-211ENST00000474412 PCSK2P16519 638 aa9.6□□□□□ -0.87
VPS50-211ENST00000474412 COL8A1P27658 744 aa9.6□□□□□ -0.87
VPS50-211ENST00000474412 GPLD1P80108 840 aa9.6□□□□□ -0.87
VPS50-211ENST00000474412 ALYREFQ86V81 257 aaKnown RBP9.6□□□□□ -0.87
VPS50-211ENST00000474412 TRIM11Q96F44 468 aa9.6□□□□□ -0.87
VPS50-211ENST00000474412 PLVAPQ9BX97 442 aa9.6□□□□□ -0.87
VPS50-211ENST00000474412 TLR7Q9NYK1 1049 aaKnown RBP9.6□□□□□ -0.87
VPS50-211ENST00000474412 NAGPAQ9UK23 515 aa9.6□□□□□ -0.87
VPS50-211ENST00000474412 INSRP06213 1382 aa9.6□□□□□ -0.87
VPS50-211ENST00000474412 SPDYE3A6NKU9 549 aa9.59□□□□□ -0.87
VPS50-211ENST00000474412 EIF1AXP47813 144 aaKnown RBP9.59□□□□□ -0.87
VPS50-211ENST00000474412 AMPHP49418 695 aa9.59□□□□□ -0.87
VPS50-211ENST00000474412 NRLP54845 237 aa9.59□□□□□ -0.87
VPS50-211ENST00000474412 PLAURQ03405 335 aa9.59□□□□□ -0.87
VPS50-211ENST00000474412 DNM1Q05193 864 aaKnown RBP9.59□□□□□ -0.87
VPS50-211ENST00000474412 ZNF211Q13398 564 aaPredicted RBP9.59□□□□□ -0.87
VPS50-211ENST00000474412 AAMPQ13685 434 aa9.59□□□□□ -0.87
VPS50-211ENST00000474412 HSP90AB2PQ58FF8 381 aa9.59□□□□□ -0.87
VPS50-211ENST00000474412 C20orf204Q6ZNR8 217 aa9.59□□□□□ -0.87
VPS50-211ENST00000474412 TRPM4Q8TD43 1214 aa9.59□□□□□ -0.87
VPS50-211ENST00000474412 EDEM1Q92611 657 aa9.59□□□□□ -0.87
VPS50-211ENST00000474412 PRDM6Q9NQX0 595 aa9.59□□□□□ -0.87
VPS50-211ENST00000474412 C4AP0C0L4 1744 aa9.59□□□□□ -0.87
VPS50-211ENST00000474412 C4BP0C0L5 1744 aa9.59□□□□□ -0.87
VPS50-211ENST00000474412 RGS9O75916 674 aaPredicted RBP9.58□□□□□ -0.88
VPS50-211ENST00000474412 EIF2AK2P19525 551 aaKnown RBP9.58□□□□□ -0.88
VPS50-211ENST00000474412 NBPF6Q5VWK0 638 aa9.58□□□□□ -0.88
VPS50-211ENST00000474412 ALKBH2Q6NS38 261 aa9.58□□□□□ -0.88
VPS50-211ENST00000474412 ELMSAN1Q6PJG2 1045 aa9.58□□□□□ -0.88
VPS50-211ENST00000474412 HFE2Q6ZVN8 426 aa9.58□□□□□ -0.88
VPS50-211ENST00000474412 TTC16Q8NEE8 873 aa9.58□□□□□ -0.88
VPS50-211ENST00000474412 NBPF4Q96M43 638 aa9.58□□□□□ -0.88
VPS50-211ENST00000474412 NSUN5Q96P11 429 aaKnown RBP9.58□□□□□ -0.88
VPS50-211ENST00000474412 ANO2Q9NQ90 1003 aa9.58□□□□□ -0.88
VPS50-211ENST00000474412 TJP1Q07157 1748 aa9.57□□□□□ -0.88
VPS50-211ENST00000474412 SRCAPQ6ZRS2 3230 aa9.57□□□□□ -0.88
VPS50-211ENST00000474412 ZBTB42B2RXF5 422 aa9.57□□□□□ -0.88
VPS50-211ENST00000474412 EXOC5O00471 708 aa9.57□□□□□ -0.88
VPS50-211ENST00000474412 FAM13AO94988 1023 aa9.57□□□□□ -0.88
VPS50-211ENST00000474412 RPLP1P05386 114 aaKnown RBP9.57□□□□□ -0.88
VPS50-211ENST00000474412 PDGFDQ9GZP0 370 aaPredicted RBP9.57□□□□□ -0.88
VPS50-211ENST00000474412 KIF7Q2M1P5 1343 aa9.56□□□□□ -0.88
VPS50-211ENST00000474412 SIPA1L3O60292 1781 aaPredicted RBP9.56□□□□□ -0.88
VPS50-211ENST00000474412 KIF24Q5T7B8 1368 aa9.56□□□□□ -0.88
VPS50-211ENST00000474412 SOX18P35713 384 aa9.56□□□□□ -0.88
VPS50-211ENST00000474412 FKBP4Q02790 459 aaKnown RBP eCLIP9.56□□□□□ -0.88
VPS50-211ENST00000474412 PERM1Q5SV97 790 aa9.56□□□□□ -0.88
VPS50-211ENST00000474412 TTC39BQ5VTQ0 682 aaPredicted RBP9.56□□□□□ -0.88
VPS50-211ENST00000474412 CGNL1Q0VF96 1302 aa9.56□□□□□ -0.88
VPS50-211ENST00000474412 DLG5Q8TDM6 1919 aa9.55□□□□□ -0.88
VPS50-211ENST00000474412 GHRHP01286 108 aa9.55□□□□□ -0.88
VPS50-211ENST00000474412 PDGFAP04085 211 aa9.55□□□□□ -0.88
VPS50-211ENST00000474412 NID1P14543 1247 aa9.55□□□□□ -0.88
VPS50-211ENST00000474412 TNNT2P45379 298 aaPredicted RBP9.55□□□□□ -0.88
VPS50-211ENST00000474412 SERPINB4P48594 390 aa9.55□□□□□ -0.88
VPS50-211ENST00000474412 PRRT3Q5FWE3 981 aa9.55□□□□□ -0.88
VPS50-211ENST00000474412 GPAT2Q6NUI2 795 aa9.55□□□□□ -0.88
VPS50-211ENST00000474412 ZNF438Q7Z4V0 828 aa9.55□□□□□ -0.88
VPS50-211ENST00000474412 DDX54Q8TDD1 881 aaKnown RBP9.55□□□□□ -0.88
VPS50-211ENST00000474412 LPIN3Q9BQK8 851 aa9.55□□□□□ -0.88
VPS50-211ENST00000474412 PANK3Q9H999 370 aa9.55□□□□□ -0.88
VPS50-211ENST00000474412 FRRS1LQ9P0K9 344 aa9.55□□□□□ -0.88
VPS50-211ENST00000474412 ADAMTS7Q9UKP4 1686 aa9.55□□□□□ -0.88
VPS50-211ENST00000474412 CICQ96RK0 1608 aaPredicted RBP9.54□□□□□ -0.88
VPS50-211ENST00000474412 LOC102724428A0A0B4J2F2 783 aa9.54□□□□□ -0.88
VPS50-211ENST00000474412 PLSCR1O15162 318 aa9.54□□□□□ -0.88
VPS50-211ENST00000474412 PPM1GO15355 546 aaPredicted RBP9.54□□□□□ -0.88
VPS50-211ENST00000474412 MZF1P28698 734 aaPredicted RBP9.54□□□□□ -0.88
VPS50-211ENST00000474412 SIK1P57059 783 aa9.54□□□□□ -0.88
VPS50-211ENST00000474412 TXNRD1Q16881 649 aa9.54□□□□□ -0.88
VPS50-211ENST00000474412 PLA2G4EQ3MJ16 856 aa9.54□□□□□ -0.88
VPS50-211ENST00000474412 C8orf34Q49A92 452 aa9.54□□□□□ -0.88
VPS50-211ENST00000474412 TRAPPC3LQ5T215 181 aa9.54□□□□□ -0.88
VPS50-211ENST00000474412 PDE12Q6L8Q7 609 aaKnown RBP9.54□□□□□ -0.88
VPS50-211ENST00000474412 SMG9Q9H0W8 520 aaKnown RBP9.54□□□□□ -0.88
VPS50-211ENST00000474412 RBSNQ9H1K0 784 aa9.54□□□□□ -0.88
VPS50-211ENST00000474412 ABI2Q9NYB9 513 aaPredicted RBP9.54□□□□□ -0.88
VPS50-211ENST00000474412 MYH14Q7Z406 1995 aaKnown RBP9.54□□□□□ -0.88
VPS50-211ENST00000474412 COL3A1P02461 1466 aaPredicted RBP9.53□□□□□ -0.88
VPS50-211ENST00000474412 UBR2Q8IWV8 1755 aa9.53□□□□□ -0.88
VPS50-211ENST00000474412 ZNF831Q5JPB2 1677 aa9.53□□□□□ -0.88
VPS50-211ENST00000474412 KRBA1A5PL33 1030 aa9.53□□□□□ -0.88
VPS50-211ENST00000474412 H3BRB1 525 aa9.53□□□□□ -0.88
VPS50-211ENST00000474412 J3QW42 95 aa9.53□□□□□ -0.88
VPS50-211ENST00000474412 SPATA31C1P0DKV0 1188 aa9.53□□□□□ -0.88
VPS50-211ENST00000474412 NPR3P17342 541 aa9.53□□□□□ -0.88
VPS50-211ENST00000474412 COL9A3Q14050 684 aaPredicted RBP9.53□□□□□ -0.88
VPS50-211ENST00000474412 OR13H1Q8NG92 308 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms