RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.88□□□□□ -1.31
TMEM50B-208ENST00000474272 PCDHA4Q9UN74 947 aa6.88□□□□□ -1.31
TMEM50B-208ENST00000474272 CNTNAP4Q9C0A0 1308 aa6.87□□□□□ -1.31
TMEM50B-208ENST00000474272 EOMESO95936 686 aa6.87□□□□□ -1.31
TMEM50B-208ENST00000474272 PTPN11Q06124 597 aaPredicted RBP6.87□□□□□ -1.31
TMEM50B-208ENST00000474272 RING1Q06587 406 aa6.87□□□□□ -1.31
TMEM50B-208ENST00000474272 INPP5AQ14642 412 aa6.87□□□□□ -1.31
TMEM50B-208ENST00000474272 TMEM40Q8WWA1 233 aa6.87□□□□□ -1.31
TMEM50B-208ENST00000474272 GTF2IRD1Q9UHL9 959 aa6.87□□□□□ -1.31
TMEM50B-208ENST00000474272 GSTT1P30711 240 aa6.86□□□□□ -1.31
TMEM50B-208ENST00000474272 ZBTB37Q5TC79 503 aa6.86□□□□□ -1.31
TMEM50B-208ENST00000474272 FYB2Q5VWT5 728 aa6.86□□□□□ -1.31
TMEM50B-208ENST00000474272 LLGL2Q6P1M3 1020 aa6.86□□□□□ -1.31
TMEM50B-208ENST00000474272 CDC37L1Q7L3B6 337 aa6.86□□□□□ -1.31
TMEM50B-208ENST00000474272 KSR1Q8IVT5 923 aa6.86□□□□□ -1.31
TMEM50B-208ENST00000474272 ASB11Q8WXH4 323 aa6.86□□□□□ -1.31
TMEM50B-208ENST00000474272 SNX11Q9Y5W9 270 aa6.86□□□□□ -1.31
TMEM50B-208ENST00000474272 ZNF503-AS2A6NEH8 195 aa6.85□□□□□ -1.31
TMEM50B-208ENST00000474272 LRRC10BA6NIK2 292 aa6.85□□□□□ -1.31
TMEM50B-208ENST00000474272 PRR33A8MZF0 331 aa6.85□□□□□ -1.31
TMEM50B-208ENST00000474272 TRIM37O94972 964 aa6.85□□□□□ -1.31
TMEM50B-208ENST00000474272 CELA3AP09093 270 aa6.85□□□□□ -1.31
TMEM50B-208ENST00000474272 LCE4AQ5TA78 99 aa6.85□□□□□ -1.31
TMEM50B-208ENST00000474272 ARMCX6Q7L4S7 300 aa6.85□□□□□ -1.31
TMEM50B-208ENST00000474272 LIN37Q96GY3 246 aaPredicted RBP6.85□□□□□ -1.31
TMEM50B-208ENST00000474272 PRAMEF27A3QJZ7 478 aa6.84□□□□□ -1.31
TMEM50B-208ENST00000474272 DBX1A6NMT0 343 aa6.84□□□□□ -1.31
TMEM50B-208ENST00000474272 GNAT3A8MTJ3 354 aa6.84□□□□□ -1.31
TMEM50B-208ENST00000474272 IGF2BP3O00425 579 aaKnown RBP eCLIP6.84□□□□□ -1.31
TMEM50B-208ENST00000474272 FANCGO15287 622 aa6.84□□□□□ -1.31
TMEM50B-208ENST00000474272 CDK8P49336 464 aa6.84□□□□□ -1.31
TMEM50B-208ENST00000474272 MESP2Q0VG99 397 aa6.84□□□□□ -1.31
TMEM50B-208ENST00000474272 PKN1Q16512 942 aa6.84□□□□□ -1.31
TMEM50B-208ENST00000474272 MLANAQ16655 118 aa6.84□□□□□ -1.31
TMEM50B-208ENST00000474272 ZSWIM9Q86XI8 627 aa6.84□□□□□ -1.31
TMEM50B-208ENST00000474272 ELMO3Q96BJ8 720 aa6.84□□□□□ -1.31
TMEM50B-208ENST00000474272 CEP44Q9C0F1 390 aa6.84□□□□□ -1.31
TMEM50B-208ENST00000474272 FBRSQ9HAH7 460 aa6.84□□□□□ -1.31
TMEM50B-208ENST00000474272 PITPNM2Q9BZ72 1349 aa6.83□□□□□ -1.32
TMEM50B-208ENST00000474272 SLITRK5O94991 958 aa6.83□□□□□ -1.32
TMEM50B-208ENST00000474272 KCNMB1Q16558 191 aa6.83□□□□□ -1.32
TMEM50B-208ENST00000474272 CDKAL1Q5VV42 579 aa6.83□□□□□ -1.32
TMEM50B-208ENST00000474272 PCNX4Q63HM2 1172 aa6.83□□□□□ -1.32
TMEM50B-208ENST00000474272 LRFN4Q6PJG9 635 aa6.83□□□□□ -1.32
TMEM50B-208ENST00000474272 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.83□□□□□ -1.32
TMEM50B-208ENST00000474272 FLAD1Q8NFF5 587 aa6.83□□□□□ -1.32
TMEM50B-208ENST00000474272 RIN3Q8TB24 985 aa6.83□□□□□ -1.32
TMEM50B-208ENST00000474272 HSPA12BQ96MM6 686 aa6.83□□□□□ -1.32
TMEM50B-208ENST00000474272 ATP13A1Q9HD20 1204 aa6.83□□□□□ -1.32
TMEM50B-208ENST00000474272 PRDM5Q9NQX1 630 aaPredicted RBP6.83□□□□□ -1.32
TMEM50B-208ENST00000474272 CTNND2Q9UQB3 1225 aa6.83□□□□□ -1.32
TMEM50B-208ENST00000474272 GNEQ9Y223 722 aaKnown RBP6.83□□□□□ -1.32
TMEM50B-208ENST00000474272 SAMM50Q9Y512 469 aa6.83□□□□□ -1.32
TMEM50B-208ENST00000474272 NKG7Q16617 165 aa6.82□□□□□ -1.32
TMEM50B-208ENST00000474272 PLPPR2Q96GM1 343 aa6.82□□□□□ -1.32
TMEM50B-208ENST00000474272 CARS2Q9HA77 564 aaKnown RBP6.82□□□□□ -1.32
TMEM50B-208ENST00000474272 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.81□□□□□ -1.32
TMEM50B-208ENST00000474272 PDE4CQ08493 712 aa6.81□□□□□ -1.32
TMEM50B-208ENST00000474272 LRRC14Q15048 493 aa6.81□□□□□ -1.32
TMEM50B-208ENST00000474272 SPOCD1Q6ZMY3 1216 aa6.81□□□□□ -1.32
TMEM50B-208ENST00000474272 ZNF507Q8TCN5 953 aa6.81□□□□□ -1.32
TMEM50B-208ENST00000474272 SLC38A3Q99624 504 aa6.81□□□□□ -1.32
TMEM50B-208ENST00000474272 FOXQ1Q9C009 403 aa6.81□□□□□ -1.32
TMEM50B-208ENST00000474272 TPX2Q9ULW0 747 aaKnown RBP6.81□□□□□ -1.32
TMEM50B-208ENST00000474272 FAM155AB1AL88 458 aaPredicted RBP6.8□□□□□ -1.32
TMEM50B-208ENST00000474272 FGD1P98174 961 aa6.8□□□□□ -1.32
TMEM50B-208ENST00000474272 SLBPQ14493 270 aaKnown RBP eCLIP6.8□□□□□ -1.32
TMEM50B-208ENST00000474272 XAGE3Q8WTP9 111 aa6.8□□□□□ -1.32
TMEM50B-208ENST00000474272 FAM84AQ96KN4 292 aa6.8□□□□□ -1.32
TMEM50B-208ENST00000474272 MIPEPQ99797 713 aa6.8□□□□□ -1.32
TMEM50B-208ENST00000474272 SEMA3GQ9NS98 782 aa6.8□□□□□ -1.32
TMEM50B-208ENST00000474272 PPM1HQ9ULR3 514 aa6.8□□□□□ -1.32
TMEM50B-208ENST00000474272 CYP8B1Q9UNU6 501 aa6.8□□□□□ -1.32
TMEM50B-208ENST00000474272 H3BS24 57 aa6.79□□□□□ -1.32
TMEM50B-208ENST00000474272 LRIG2O94898 1065 aa6.79□□□□□ -1.32
TMEM50B-208ENST00000474272 USP17L7P0C7H9 530 aa6.79□□□□□ -1.32
TMEM50B-208ENST00000474272 CLCN7P51798 805 aa6.79□□□□□ -1.32
TMEM50B-208ENST00000474272 FMR1Q06787 632 aaKnown RBP eCLIP6.79□□□□□ -1.32
TMEM50B-208ENST00000474272 PRR23BQ6ZRT6 265 aa6.79□□□□□ -1.32
TMEM50B-208ENST00000474272 CYFIP1Q7L576 1253 aa6.79□□□□□ -1.32
TMEM50B-208ENST00000474272 FBF1Q8TES7 1133 aa6.79□□□□□ -1.32
TMEM50B-208ENST00000474272 SRCIN1Q9C0H9 1055 aa6.79□□□□□ -1.32
TMEM50B-208ENST00000474272 KCNK12Q9HB15 430 aa6.79□□□□□ -1.32
TMEM50B-208ENST00000474272 BRD1O95696 1058 aa6.78□□□□□ -1.32
TMEM50B-208ENST00000474272 CBX7O95931 251 aa6.78□□□□□ -1.32
TMEM50B-208ENST00000474272 ETF1P62495 437 aaKnown RBP6.78□□□□□ -1.32
TMEM50B-208ENST00000474272 FBLN7Q53RD9 439 aa6.78□□□□□ -1.32
TMEM50B-208ENST00000474272 ALG1LQ6GMV1 187 aa6.78□□□□□ -1.32
TMEM50B-208ENST00000474272 KCT2Q8NC54 265 aa6.78□□□□□ -1.32
TMEM50B-208ENST00000474272 C19orf73Q9NVV2 129 aa6.78□□□□□ -1.32
TMEM50B-208ENST00000474272 MAPK8IP1Q9UQF2 711 aa6.78□□□□□ -1.32
TMEM50B-208ENST00000474272 AFMP43652 599 aa6.77□□□□□ -1.33
TMEM50B-208ENST00000474272 WIPI1Q5MNZ9 446 aaPredicted RBP6.77□□□□□ -1.33
TMEM50B-208ENST00000474272 SFRP5Q5T4F7 317 aa6.77□□□□□ -1.33
TMEM50B-208ENST00000474272 MPZL3Q6UWV2 235 aa6.77□□□□□ -1.33
TMEM50B-208ENST00000474272 HDXQ7Z353 690 aa6.77□□□□□ -1.33
TMEM50B-208ENST00000474272 ZSCAN29Q8IWY8 852 aaPredicted RBP6.77□□□□□ -1.33
TMEM50B-208ENST00000474272 GAL3ST3Q96A11 431 aa6.77□□□□□ -1.33
TMEM50B-208ENST00000474272 WNT10AQ9GZT5 417 aa6.77□□□□□ -1.33
TMEM50B-208ENST00000474272 C12orf49Q9H741 205 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms