RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 ZNF333Q96JL9 665 aa14.64□□□□□ -0.07
SMPD4-217ENST00000473720 GPR108Q9NPR9 543 aa14.64□□□□□ -0.07
SMPD4-217ENST00000473720 EXOC6BQ9Y2D4 811 aa14.64□□□□□ -0.07
SMPD4-217ENST00000473720 NDUFB9Q9Y6M9 179 aa14.64□□□□□ -0.07
SMPD4-217ENST00000473720 BRCA2P51587 3418 aa14.64□□□□□ -0.07
SMPD4-217ENST00000473720 BAZ2AQ9UIF9 1905 aaKnown RBP14.63□□□□□ -0.07
SMPD4-217ENST00000473720 APBB1O00213 710 aa14.63□□□□□ -0.07
SMPD4-217ENST00000473720 BAG3O95817 575 aa14.63□□□□□ -0.07
SMPD4-217ENST00000473720 OSBPP22059 807 aa14.63□□□□□ -0.07
SMPD4-217ENST00000473720 MAP3K10Q02779 954 aa14.63□□□□□ -0.07
SMPD4-217ENST00000473720 MAPKAPK5Q8IW41 473 aa14.63□□□□□ -0.07
SMPD4-217ENST00000473720 RAET1EQ8TD07 263 aa14.63□□□□□ -0.07
SMPD4-217ENST00000473720 TGFBRAP1Q8WUH2 860 aa14.63□□□□□ -0.07
SMPD4-217ENST00000473720 TRIM47Q96LD4 638 aa14.63□□□□□ -0.07
SMPD4-217ENST00000473720 DBNLQ9UJU6 430 aaKnown RBP14.63□□□□□ -0.07
SMPD4-217ENST00000473720 ADGRA2Q96PE1 1338 aa14.63□□□□□ -0.07
SMPD4-217ENST00000473720 CEP85Q6P2H3 762 aa14.62□□□□□ -0.07
SMPD4-217ENST00000473720 ADGRA1Q86SQ6 560 aa14.62□□□□□ -0.07
SMPD4-217ENST00000473720 SMCR8Q8TEV9 937 aaPredicted RBP14.62□□□□□ -0.07
SMPD4-217ENST00000473720 EAF2Q96CJ1 260 aaPredicted RBP14.62□□□□□ -0.07
SMPD4-217ENST00000473720 TRIM34Q9BYJ4 488 aa14.62□□□□□ -0.07
SMPD4-217ENST00000473720 PIH1D3Q9NQM4 214 aaKnown RBP14.62□□□□□ -0.07
SMPD4-217ENST00000473720 BIN2Q9UBW5 565 aaPredicted RBP14.62□□□□□ -0.07
SMPD4-217ENST00000473720 SAP30BPQ9UHR5 308 aaKnown RBP14.62□□□□□ -0.07
SMPD4-217ENST00000473720 MKI67P46013 3256 aaKnown RBP14.62□□□□□ -0.07
SMPD4-217ENST00000473720 MYPNQ86TC9 1320 aa14.62□□□□□ -0.07
SMPD4-217ENST00000473720 TBC1D12O60347 775 aa14.61□□□□□ -0.07
SMPD4-217ENST00000473720 IDH1O75874 414 aaKnown RBP14.61□□□□□ -0.07
SMPD4-217ENST00000473720 MAP4K4O95819 1239 aaPredicted RBP14.61□□□□□ -0.07
SMPD4-217ENST00000473720 GNRH1P01148 92 aa14.61□□□□□ -0.07
SMPD4-217ENST00000473720 HOXD10P28358 340 aa14.61□□□□□ -0.07
SMPD4-217ENST00000473720 DYNLL1P63167 89 aaKnown RBP14.61□□□□□ -0.07
SMPD4-217ENST00000473720 SPP2Q13103 211 aa14.61□□□□□ -0.07
SMPD4-217ENST00000473720 AACSQ86V21 672 aa14.61□□□□□ -0.07
SMPD4-217ENST00000473720 CRACR2BQ8N4Y2 399 aaPredicted RBP14.61□□□□□ -0.07
SMPD4-217ENST00000473720 SRRDQ9UH36 339 aa14.61□□□□□ -0.07
SMPD4-217ENST00000473720 NOP58Q9Y2X3 529 aaKnown RBP14.61□□□□□ -0.07
SMPD4-217ENST00000473720 NPM3O75607 178 aaKnown RBP14.6□□□□□ -0.07
SMPD4-217ENST00000473720 PLCG2P16885 1265 aa14.6□□□□□ -0.07
SMPD4-217ENST00000473720 CYP7A1P22680 504 aa14.6□□□□□ -0.07
SMPD4-217ENST00000473720 PRMT2P55345 433 aa14.6□□□□□ -0.07
SMPD4-217ENST00000473720 FCGRTP55899 365 aa14.6□□□□□ -0.07
SMPD4-217ENST00000473720 RRP1BQ14684 758 aaKnown RBP14.6□□□□□ -0.07
SMPD4-217ENST00000473720 MTFR1Q15390 333 aa14.6□□□□□ -0.07
SMPD4-217ENST00000473720 TREML2Q5T2D2 321 aa14.6□□□□□ -0.07
SMPD4-217ENST00000473720 MIGA1Q8NAN2 632 aa14.6□□□□□ -0.07
SMPD4-217ENST00000473720 IL1RAPL2Q9NP60 686 aa14.6□□□□□ -0.07
SMPD4-217ENST00000473720 TAOK2Q9UL54 1235 aa14.6□□□□□ -0.07
SMPD4-217ENST00000473720 PALD1Q9ULE6 856 aa14.6□□□□□ -0.07
SMPD4-217ENST00000473720 GABRQQ9UN88 632 aa14.6□□□□□ -0.07
SMPD4-217ENST00000473720 COL2A1P02458 1487 aaPredicted RBP14.6□□□□□ -0.07
SMPD4-217ENST00000473720 FLT1P17948 1338 aa14.6□□□□□ -0.07
SMPD4-217ENST00000473720 BCRP11274 1271 aa14.59□□□□□ -0.07
SMPD4-217ENST00000473720 GRK4P32298 578 aa14.59□□□□□ -0.07
SMPD4-217ENST00000473720 CAP2P40123 477 aa14.59□□□□□ -0.07
SMPD4-217ENST00000473720 HMGCS2P54868 508 aa14.59□□□□□ -0.07
SMPD4-217ENST00000473720 PRKCZQ05513 592 aa14.59□□□□□ -0.07
SMPD4-217ENST00000473720 ANKRD13CQ8N6S4 541 aa14.59□□□□□ -0.07
SMPD4-217ENST00000473720 MAGEB6Q8N7X4 407 aa14.59□□□□□ -0.07
SMPD4-217ENST00000473720 ZNF280CQ8ND82 737 aa14.59□□□□□ -0.07
SMPD4-217ENST00000473720 PI4KBQ9UBF8 816 aa14.59□□□□□ -0.07
SMPD4-217ENST00000473720 AGTPBP1Q9UPW5 1226 aa14.59□□□□□ -0.07
SMPD4-217ENST00000473720 COG6Q9Y2V7 657 aa14.59□□□□□ -0.07
SMPD4-217ENST00000473720 PLXNB2O15031 1838 aa14.59□□□□□ -0.07
SMPD4-217ENST00000473720 USP17L5A8MUK1 530 aa14.58□□□□□ -0.08
SMPD4-217ENST00000473720 GDF11O95390 407 aa14.58□□□□□ -0.08
SMPD4-217ENST00000473720 SLC34A2O95436 690 aa14.58□□□□□ -0.08
SMPD4-217ENST00000473720 USP5P45974 858 aa14.58□□□□□ -0.08
SMPD4-217ENST00000473720 ERC1Q8IUD2 1116 aa14.58□□□□□ -0.08
SMPD4-217ENST00000473720 DHX36Q9H2U1 1008 aaKnown RBP14.58□□□□□ -0.08
SMPD4-217ENST00000473720 ANTXR1Q9H6X2 564 aa14.58□□□□□ -0.08
SMPD4-217ENST00000473720 HERC5Q9UII4 1024 aaKnown RBP14.58□□□□□ -0.08
SMPD4-217ENST00000473720 TNPO2O14787 897 aaKnown RBP14.57□□□□□ -0.08
SMPD4-217ENST00000473720 MS4A1P11836 297 aa14.57□□□□□ -0.08
SMPD4-217ENST00000473720 PPP4CP60510 307 aa14.57□□□□□ -0.08
SMPD4-217ENST00000473720 SHROOM1Q2M3G4 852 aaPredicted RBP14.57□□□□□ -0.08
SMPD4-217ENST00000473720 ZNF512BQ96KM6 892 aaPredicted RBP14.57□□□□□ -0.08
SMPD4-217ENST00000473720 AS3MTQ9HBK9 375 aa14.57□□□□□ -0.08
SMPD4-217ENST00000473720 PNMA3Q9UL41 463 aa14.57□□□□□ -0.08
SMPD4-217ENST00000473720 SLC45A1Q9Y2W3 748 aa14.57□□□□□ -0.08
SMPD4-217ENST00000473720 DDX60LQ5H9U9 1706 aaKnown RBP14.56□□□□□ -0.08
SMPD4-217ENST00000473720 HLA-DOAP06340 250 aa14.56□□□□□ -0.08
SMPD4-217ENST00000473720 MTMR2Q13614 643 aa14.56□□□□□ -0.08
SMPD4-217ENST00000473720 PROCA1Q8NCQ7 364 aaPredicted RBP14.56□□□□□ -0.08
SMPD4-217ENST00000473720 RHPN1Q8TCX5 695 aa14.56□□□□□ -0.08
SMPD4-217ENST00000473720 DNAJC18Q9H819 358 aa14.56□□□□□ -0.08
SMPD4-217ENST00000473720 CCL5P13501 91 aa14.55□□□□□ -0.08
SMPD4-217ENST00000473720 ELNP15502 786 aa14.55□□□□□ -0.08
SMPD4-217ENST00000473720 FLT3LGP49771 235 aa14.55□□□□□ -0.08
SMPD4-217ENST00000473720 UBXN2AP68543 259 aa14.55□□□□□ -0.08
SMPD4-217ENST00000473720 JAG1P78504 1218 aa14.55□□□□□ -0.08
SMPD4-217ENST00000473720 MAP3K12Q12852 859 aa14.55□□□□□ -0.08
SMPD4-217ENST00000473720 HSP90AB4PQ58FF6 505 aa14.55□□□□□ -0.08
SMPD4-217ENST00000473720 TBC1D2Q9BYX2 928 aa14.55□□□□□ -0.08
SMPD4-217ENST00000473720 RNF208Q9H0X6 261 aa14.55□□□□□ -0.08
SMPD4-217ENST00000473720 ALPK3Q96L96 1907 aa14.54□□□□□ -0.08
SMPD4-217ENST00000473720 ADCY3O60266 1144 aa14.54□□□□□ -0.08
SMPD4-217ENST00000473720 ASNSP08243 561 aa14.54□□□□□ -0.08
SMPD4-217ENST00000473720 IFIT2P09913 472 aaKnown RBP14.54□□□□□ -0.08
SMPD4-217ENST00000473720 PABPC4Q13310 644 aaKnown RBP eCLIP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms