RNA–Protein interactions for RNA: ENST00000473480.5

A1CF-209, Transcript of APOBEC1 complementation factor, humanhuman

TSL 3

Gene A1CF, Length 813 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-209ENST00000473480 CCDC18Q5T9S5 1454 aa10.72□□□□□ -0.69
A1CF-209ENST00000473480 K7ELQ4 463 aaPredicted RBP10.71□□□□□ -0.69
A1CF-209ENST00000473480 DDX3YO15523 660 aaKnown RBP10.71□□□□□ -0.69
A1CF-209ENST00000473480 ADAM11O75078 769 aa10.71□□□□□ -0.69
A1CF-209ENST00000473480 ALX3O95076 343 aa10.71□□□□□ -0.69
A1CF-209ENST00000473480 WISP1O95388 367 aa10.71□□□□□ -0.69
A1CF-209ENST00000473480 GLI3P10071 1580 aa10.71□□□□□ -0.69
A1CF-209ENST00000473480 FMR1Q06787 632 aaKnown RBP eCLIP10.71□□□□□ -0.69
A1CF-209ENST00000473480 PRPF40BQ6NWY9 871 aaKnown RBP10.71□□□□□ -0.69
A1CF-209ENST00000473480 CCNB3Q8WWL7 1395 aa10.71□□□□□ -0.69
A1CF-209ENST00000473480 MBD5Q9P267 1494 aa10.71□□□□□ -0.69
A1CF-209ENST00000473480 TBX22Q9Y458 520 aa10.71□□□□□ -0.69
A1CF-209ENST00000473480 MST1RQ04912 1400 aa10.7□□□□□ -0.7
A1CF-209ENST00000473480 MAPK8P45983 427 aa10.7□□□□□ -0.7
A1CF-209ENST00000473480 NLRP12P59046 1061 aa10.7□□□□□ -0.7
A1CF-209ENST00000473480 PCDH1Q08174 1060 aa10.7□□□□□ -0.7
A1CF-209ENST00000473480 EZH2Q15910 746 aaKnown RBP10.7□□□□□ -0.7
A1CF-209ENST00000473480 AGGF1Q8N302 714 aaeCLIP10.7□□□□□ -0.7
A1CF-209ENST00000473480 ZNF644Q9H582 1327 aaPredicted RBP10.69□□□□□ -0.7
A1CF-209ENST00000473480 ADAM23O75077 832 aa10.69□□□□□ -0.7
A1CF-209ENST00000473480 ITPKAP23677 461 aa10.69□□□□□ -0.7
A1CF-209ENST00000473480 PTPN12Q05209 780 aaKnown RBP10.69□□□□□ -0.7
A1CF-209ENST00000473480 IDI1Q13907 227 aa10.69□□□□□ -0.7
A1CF-209ENST00000473480 GRM2Q14416 872 aa10.69□□□□□ -0.7
A1CF-209ENST00000473480 HGSNATQ68CP4 663 aa10.69□□□□□ -0.7
A1CF-209ENST00000473480 Q6ZS46 218 aa10.69□□□□□ -0.7
A1CF-209ENST00000473480 UBASH3BQ8TF42 649 aa10.69□□□□□ -0.7
A1CF-209ENST00000473480 TP53INP1Q96A56 240 aa10.69□□□□□ -0.7
A1CF-209ENST00000473480 MEGF10Q96KG7 1140 aa10.69□□□□□ -0.7
A1CF-209ENST00000473480 ABCB6Q9NP58 842 aa10.69□□□□□ -0.7
A1CF-209ENST00000473480 PPP4R2Q9NY27 417 aa10.69□□□□□ -0.7
A1CF-209ENST00000473480 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.69□□□□□ -0.7
A1CF-209ENST00000473480 CASKIN1Q8WXD9 1431 aa10.68□□□□□ -0.7
A1CF-209ENST00000473480 RGPD1P0DJD0 1748 aa10.68□□□□□ -0.7
A1CF-209ENST00000473480 RSPO4Q2I0M5 234 aaPredicted RBP10.68□□□□□ -0.7
A1CF-209ENST00000473480 NBPF8Q3BBV2 869 aa10.68□□□□□ -0.7
A1CF-209ENST00000473480 NKAPLQ5M9Q1 402 aa10.68□□□□□ -0.7
A1CF-209ENST00000473480 KIAA1211Q6ZU35 1233 aa10.68□□□□□ -0.7
A1CF-209ENST00000473480 DZIP1LQ8IYY4 767 aaKnown RBP10.68□□□□□ -0.7
A1CF-209ENST00000473480 FBF1Q8TES7 1133 aa10.68□□□□□ -0.7
A1CF-209ENST00000473480 DISP2A7MBM2 1401 aa10.67□□□□□ -0.7
A1CF-209ENST00000473480 PLEKHG1Q9ULL1 1385 aa10.67□□□□□ -0.7
A1CF-209ENST00000473480 TMEM238LA0A1B0GVL6 79 aa10.67□□□□□ -0.7
A1CF-209ENST00000473480 GLB1P16278 677 aa10.67□□□□□ -0.7
A1CF-209ENST00000473480 PI16Q6UXB8 463 aa10.67□□□□□ -0.7
A1CF-209ENST00000473480 GLIS3Q8NEA6 775 aa10.67□□□□□ -0.7
A1CF-209ENST00000473480 CEP41Q9BYV8 373 aa10.67□□□□□ -0.7
A1CF-209ENST00000473480 ZNF576Q9H609 170 aa10.67□□□□□ -0.7
A1CF-209ENST00000473480 CEP152O94986 1710 aa10.67□□□□□ -0.7
A1CF-209ENST00000473480 ARHGAP31Q2M1Z3 1444 aa10.67□□□□□ -0.7
A1CF-209ENST00000473480 H2AFB1P0C5Y9 115 aa10.66□□□□□ -0.7
A1CF-209ENST00000473480 H2AFB2P0C5Z0 115 aa10.66□□□□□ -0.7
A1CF-209ENST00000473480 HSPA6P17066 643 aa10.66□□□□□ -0.7
A1CF-209ENST00000473480 ATP2B2Q01814 1243 aa10.66□□□□□ -0.7
A1CF-209ENST00000473480 GSTM4Q03013 218 aa10.66□□□□□ -0.7
A1CF-209ENST00000473480 ZNF423Q2M1K9 1284 aa10.66□□□□□ -0.7
A1CF-209ENST00000473480 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.66□□□□□ -0.7
A1CF-209ENST00000473480 ALG1LQ6GMV1 187 aa10.66□□□□□ -0.7
A1CF-209ENST00000473480 DDX54Q8TDD1 881 aaKnown RBP10.66□□□□□ -0.7
A1CF-209ENST00000473480 MARF1Q9Y4F3 1742 aaKnown RBP10.66□□□□□ -0.7
A1CF-209ENST00000473480 RPS26P11Q5JNZ5 115 aaPredicted RBP10.65□□□□□ -0.7
A1CF-209ENST00000473480 CAMKK2Q96RR4 588 aa10.65□□□□□ -0.7
A1CF-209ENST00000473480 USP26Q9BXU7 913 aa10.65□□□□□ -0.7
A1CF-209ENST00000473480 BCO2Q9BYV7 579 aa10.65□□□□□ -0.7
A1CF-209ENST00000473480 RNF208Q9H0X6 261 aa10.65□□□□□ -0.7
A1CF-209ENST00000473480 SEMA6BQ9H3T3 888 aa10.65□□□□□ -0.7
A1CF-209ENST00000473480 ZFYVE1Q9HBF4 777 aa10.65□□□□□ -0.7
A1CF-209ENST00000473480 COL22A1Q8NFW1 1626 aaPredicted RBP10.65□□□□□ -0.7
A1CF-209ENST00000473480 PIK3R4Q99570 1358 aa10.65□□□□□ -0.71
A1CF-209ENST00000473480 FAM83GA6ND36 823 aa10.64□□□□□ -0.71
A1CF-209ENST00000473480 B3GALT4O96024 378 aa10.64□□□□□ -0.71
A1CF-209ENST00000473480 RUSC1Q9BVN2 902 aa10.64□□□□□ -0.71
A1CF-209ENST00000473480 MYOM2P54296 1465 aa10.63□□□□□ -0.71
A1CF-209ENST00000473480 CCDC141Q6ZP82 1450 aa10.63□□□□□ -0.71
A1CF-209ENST00000473480 DYRK3O43781 588 aa10.63□□□□□ -0.71
A1CF-209ENST00000473480 P4HBP07237 508 aaKnown RBP10.63□□□□□ -0.71
A1CF-209ENST00000473480 XRCC5P13010 732 aaKnown RBP10.63□□□□□ -0.71
A1CF-209ENST00000473480 DTHD1Q6ZMT9 781 aa10.63□□□□□ -0.71
A1CF-209ENST00000473480 CCDC9Q9Y3X0 531 aaKnown RBP10.63□□□□□ -0.71
A1CF-209ENST00000473480 MTUS2Q5JR59 1369 aa10.63□□□□□ -0.71
A1CF-209ENST00000473480 PARD3Q8TEW0 1356 aa10.63□□□□□ -0.71
A1CF-209ENST00000473480 RPRD2Q5VT52 1461 aaKnown RBP10.62□□□□□ -0.71
A1CF-209ENST00000473480 LOC100289279A0A1B0GTE1 492 aa10.62□□□□□ -0.71
A1CF-209ENST00000473480 CYP11A1P05108 521 aa10.62□□□□□ -0.71
A1CF-209ENST00000473480 TSPY4P0CV99 314 aa10.62□□□□□ -0.71
A1CF-209ENST00000473480 TSPY10P0CW01 314 aa10.62□□□□□ -0.71
A1CF-209ENST00000473480 FCGRTP55899 365 aa10.62□□□□□ -0.71
A1CF-209ENST00000473480 VPS72Q15906 364 aa10.62□□□□□ -0.71
A1CF-209ENST00000473480 ANKRD34AQ69YU3 496 aa10.62□□□□□ -0.71
A1CF-209ENST00000473480 SLIT2O94813 1529 aa10.62□□□□□ -0.71
A1CF-209ENST00000473480 MEGF11A6BM72 1044 aa10.61□□□□□ -0.71
A1CF-209ENST00000473480 ANKRD33BA6NCL7 494 aa10.61□□□□□ -0.71
A1CF-209ENST00000473480 COL19A1Q14993 1142 aa10.61□□□□□ -0.71
A1CF-209ENST00000473480 UVSSAQ2YD98 709 aa10.61□□□□□ -0.71
A1CF-209ENST00000473480 NXPE4Q6UWF7 544 aa10.61□□□□□ -0.71
A1CF-209ENST00000473480 UBL7Q96S82 380 aaPredicted RBP10.61□□□□□ -0.71
A1CF-209ENST00000473480 SRCIN1Q9C0H9 1055 aa10.61□□□□□ -0.71
A1CF-209ENST00000473480 WWC3Q9ULE0 1092 aa10.61□□□□□ -0.71
A1CF-209ENST00000473480 LAMC1P11047 1609 aa10.61□□□□□ -0.71
A1CF-209ENST00000473480 FDX2Q6P4F2 183 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms