RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 EFCC1Q9HA90 598 aa23.57■■□□□ 1.36
COMMD1-208ENST00000472729 FLT1P17948 1338 aa23.57■■□□□ 1.36
COMMD1-208ENST00000472729 MAGEB6P1A0A0J9YX57 407 aa23.56■■□□□ 1.36
COMMD1-208ENST00000472729 FAM196BA6NMK8 535 aa23.56■■□□□ 1.36
COMMD1-208ENST00000472729 TLR2O60603 784 aa23.56■■□□□ 1.36
COMMD1-208ENST00000472729 ATP5JP18859 108 aa23.56■■□□□ 1.36
COMMD1-208ENST00000472729 GADL1Q6ZQY3 521 aa23.56■■□□□ 1.36
COMMD1-208ENST00000472729 CD99L2Q8TCZ2 262 aa23.56■■□□□ 1.36
COMMD1-208ENST00000472729 PAG1Q9NWQ8 432 aa23.56■■□□□ 1.36
COMMD1-208ENST00000472729 SAP30BPQ9UHR5 308 aaKnown RBP23.56■■□□□ 1.36
COMMD1-208ENST00000472729 PALD1Q9ULE6 856 aa23.56■■□□□ 1.36
COMMD1-208ENST00000472729 HPS5Q9UPZ3 1129 aa23.56■■□□□ 1.36
COMMD1-208ENST00000472729 MYH2Q9UKX2 1941 aa23.56■■□□□ 1.36
COMMD1-208ENST00000472729 TRIM75PA6NK02 468 aa23.55■■□□□ 1.36
COMMD1-208ENST00000472729 PARK7Q99497 189 aaKnown RBP23.55■■□□□ 1.36
COMMD1-208ENST00000472729 TBC1D2Q9BYX2 928 aa23.55■■□□□ 1.36
COMMD1-208ENST00000472729 COL2A1P02458 1487 aaPredicted RBP23.55■■□□□ 1.36
COMMD1-208ENST00000472729 SMARCA5O60264 1052 aaPredicted RBP23.54■■□□□ 1.36
COMMD1-208ENST00000472729 CRNKL1Q9BZJ0 848 aaKnown RBP23.54■■□□□ 1.36
COMMD1-208ENST00000472729 DCTPP1Q9H773 170 aa23.54■■□□□ 1.36
COMMD1-208ENST00000472729 AS3MTQ9HBK9 375 aa23.54■■□□□ 1.36
COMMD1-208ENST00000472729 AFG3L2Q9Y4W6 797 aa23.54■■□□□ 1.36
COMMD1-208ENST00000472729 SLURP2P0DP57 97 aa23.53■■□□□ 1.36
COMMD1-208ENST00000472729 PDE6AP16499 860 aa23.53■■□□□ 1.36
COMMD1-208ENST00000472729 CAP2P40123 477 aa23.53■■□□□ 1.36
COMMD1-208ENST00000472729 ZSCAN25Q6NSZ9 544 aa23.53■■□□□ 1.36
COMMD1-208ENST00000472729 OTOP1Q7RTM1 612 aa23.53■■□□□ 1.36
COMMD1-208ENST00000472729 TTC6Q86TZ1 520 aa23.53■■□□□ 1.36
COMMD1-208ENST00000472729 SLC4A8Q2Y0W8 1093 aa23.52■■□□□ 1.36
COMMD1-208ENST00000472729 ECHDC1Q9NTX5 307 aa23.52■■□□□ 1.36
COMMD1-208ENST00000472729 ZNF532Q9HCE3 1301 aa23.52■■□□□ 1.36
COMMD1-208ENST00000472729 AK9Q5TCS8 1911 aa23.51■■□□□ 1.35
COMMD1-208ENST00000472729 A0A0G2JLL6 359 aaPredicted RBP23.51■■□□□ 1.35
COMMD1-208ENST00000472729 USP17L5A8MUK1 530 aa23.51■■□□□ 1.35
COMMD1-208ENST00000472729 POLR3DP05423 398 aaPredicted RBP23.51■■□□□ 1.35
COMMD1-208ENST00000472729 ASNSP08243 561 aa23.51■■□□□ 1.35
COMMD1-208ENST00000472729 PRRT2Q7Z6L0 340 aaPredicted RBP23.51■■□□□ 1.35
COMMD1-208ENST00000472729 ZNF280CQ8ND82 737 aa23.51■■□□□ 1.35
COMMD1-208ENST00000472729 HAUS7Q99871 368 aa23.51■■□□□ 1.35
COMMD1-208ENST00000472729 SPP2Q13103 211 aa23.5■■□□□ 1.35
COMMD1-208ENST00000472729 SMCR8Q8TEV9 937 aaPredicted RBP23.5■■□□□ 1.35
COMMD1-208ENST00000472729 DDRGK1Q96HY6 314 aa23.5■■□□□ 1.35
COMMD1-208ENST00000472729 CPA4Q9UI42 421 aa23.5■■□□□ 1.35
COMMD1-208ENST00000472729 OTOFQ9HC10 1997 aa23.5■■□□□ 1.35
COMMD1-208ENST00000472729 PABPC4Q13310 644 aaKnown RBP eCLIP23.49■■□□□ 1.357e-6■■□□□ 14.2
COMMD1-208ENST00000472729 GINM1Q9NU53 330 aa23.49■■□□□ 1.35
COMMD1-208ENST00000472729 SERPINB13Q9UIV8 391 aa23.49■■□□□ 1.35
COMMD1-208ENST00000472729 CCDC84Q86UT8 332 aaPredicted RBP23.48■■□□□ 1.35
COMMD1-208ENST00000472729 AMOTL1Q8IY63 956 aa23.48■■□□□ 1.35
COMMD1-208ENST00000472729 EDC3Q96F86 508 aaKnown RBP23.48■■□□□ 1.35
COMMD1-208ENST00000472729 CRBNQ96SW2 442 aa23.48■■□□□ 1.35
COMMD1-208ENST00000472729 PNMA3Q9UL41 463 aa23.48■■□□□ 1.35
COMMD1-208ENST00000472729 PTPN22Q9Y2R2 807 aa23.48■■□□□ 1.35
COMMD1-208ENST00000472729 GNRH1P01148 92 aa23.47■■□□□ 1.35
COMMD1-208ENST00000472729 HOXD10P28358 340 aa23.47■■□□□ 1.35
COMMD1-208ENST00000472729 SOX10P56693 466 aa23.47■■□□□ 1.35
COMMD1-208ENST00000472729 LACTBP83111 547 aaPredicted RBP23.47■■□□□ 1.35
COMMD1-208ENST00000472729 MLLT1Q03111 559 aaPredicted RBP23.47■■□□□ 1.35
COMMD1-208ENST00000472729 RIOK1Q9BRS2 568 aaKnown RBP23.47■■□□□ 1.35
COMMD1-208ENST00000472729 MCM9Q9NXL9 1143 aa23.47■■□□□ 1.35
COMMD1-208ENST00000472729 TMOD4Q9NZQ9 345 aa23.47■■□□□ 1.35
COMMD1-208ENST00000472729 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.47■■□□□ 1.35
COMMD1-208ENST00000472729 SLC45A1Q9Y2W3 748 aa23.47■■□□□ 1.35
COMMD1-208ENST00000472729 PCDHB15Q9Y5E8 787 aa23.47■■□□□ 1.35
COMMD1-208ENST00000472729 FMNL1O95466 1100 aaPredicted RBP23.46■■□□□ 1.35
COMMD1-208ENST00000472729 CYP2C8P10632 490 aa23.46■■□□□ 1.35
COMMD1-208ENST00000472729 LRRFIP1Q32MZ4 808 aaKnown RBP23.46■■□□□ 1.35
COMMD1-208ENST00000472729 GPAT2Q6NUI2 795 aa23.46■■□□□ 1.35
COMMD1-208ENST00000472729 NBPF11Q86T75 865 aa23.46■■□□□ 1.35
COMMD1-208ENST00000472729 PROCA1Q8NCQ7 364 aaPredicted RBP23.46■■□□□ 1.35
COMMD1-208ENST00000472729 AGTPBP1Q9UPW5 1226 aa23.46■■□□□ 1.35
COMMD1-208ENST00000472729 ERC2O15083 957 aa23.45■■□□□ 1.34
COMMD1-208ENST00000472729 ECM2O94769 699 aaPredicted RBP23.45■■□□□ 1.34
COMMD1-208ENST00000472729 GDF11O95390 407 aa23.45■■□□□ 1.34
COMMD1-208ENST00000472729 OSBPP22059 807 aa23.45■■□□□ 1.34
COMMD1-208ENST00000472729 ADD2P35612 726 aa23.45■■□□□ 1.34
COMMD1-208ENST00000472729 HMGCS2P54868 508 aa23.45■■□□□ 1.34
COMMD1-208ENST00000472729 MOGSQ13724 837 aa23.45■■□□□ 1.34
COMMD1-208ENST00000472729 C17orf99Q6UX52 265 aa23.45■■□□□ 1.34
COMMD1-208ENST00000472729 METTL16Q86W50 562 aaKnown RBP23.45■■□□□ 1.34
COMMD1-208ENST00000472729 EHD4Q9H223 541 aa23.45■■□□□ 1.34
COMMD1-208ENST00000472729 CABP5Q9NP86 173 aa23.45■■□□□ 1.34
COMMD1-208ENST00000472729 UBE3CQ15386 1083 aa23.44■■□□□ 1.34
COMMD1-208ENST00000472729 ARMT1Q9H993 441 aa23.44■■□□□ 1.34
COMMD1-208ENST00000472729 MAST2Q6P0Q8 1798 aa23.43■■□□□ 1.34
COMMD1-208ENST00000472729 TCRBV5S4A2TA0A5A2 114 aa23.43■■□□□ 1.34
COMMD1-208ENST00000472729 MBD4O95243 580 aa23.43■■□□□ 1.34
COMMD1-208ENST00000472729 PSMC4P43686 418 aa23.43■■□□□ 1.34
COMMD1-208ENST00000472729 AAMPQ13685 434 aa23.43■■□□□ 1.34
COMMD1-208ENST00000472729 CERKLQ49MI3 558 aaPredicted RBP23.43■■□□□ 1.34
COMMD1-208ENST00000472729 LCORLQ8N3X6 602 aa23.43■■□□□ 1.34
COMMD1-208ENST00000472729 WDR18Q9BV38 432 aa23.43■■□□□ 1.34
COMMD1-208ENST00000472729 ZBTB21Q9ULJ3 1066 aa23.43■■□□□ 1.34
COMMD1-208ENST00000472729 C19orf81C9J6K1 198 aa23.42■■□□□ 1.34
COMMD1-208ENST00000472729 USP17L10C9JJH3 530 aa23.42■■□□□ 1.34
COMMD1-208ENST00000472729 PRMT2P55345 433 aa23.42■■□□□ 1.34
COMMD1-208ENST00000472729 FCGRTP55899 365 aa23.42■■□□□ 1.34
COMMD1-208ENST00000472729 MTMR2Q13614 643 aa23.42■■□□□ 1.34
COMMD1-208ENST00000472729 RRP1BQ14684 758 aaKnown RBP23.42■■□□□ 1.34
COMMD1-208ENST00000472729 SLC9C1Q4G0N8 1177 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms