RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 CCDC129Q6ZRS4 1044 aa7.45□□□□□ -1.22
SIK3-208ENST00000472648 PI4KAP1Q8N8J0 262 aa7.45□□□□□ -1.22
SIK3-208ENST00000472648 LPAR1Q92633 364 aa7.45□□□□□ -1.22
SIK3-208ENST00000472648 MYH16Q9H6N6 1097 aa7.45□□□□□ -1.22
SIK3-208ENST00000472648 CWC22Q9HCG8 908 aaKnown RBP7.45□□□□□ -1.22
SIK3-208ENST00000472648 SPINK5Q9NQ38 1064 aaPredicted RBP7.45□□□□□ -1.22
SIK3-208ENST00000472648 PDLIM7Q9NR12 457 aa7.45□□□□□ -1.22
SIK3-208ENST00000472648 CLSPNQ9HAW4 1339 aa7.45□□□□□ -1.22
SIK3-208ENST00000472648 USP34Q70CQ2 3546 aa7.45□□□□□ -1.22
SIK3-208ENST00000472648 ZNF236Q9UL36 1845 aa7.45□□□□□ -1.22
SIK3-208ENST00000472648 CFAP54Q96N23 3096 aa7.45□□□□□ -1.22
SIK3-208ENST00000472648 PHF20L1A8MW92 1017 aa7.44□□□□□ -1.22
SIK3-208ENST00000472648 KCNQ1P51787 676 aa7.44□□□□□ -1.22
SIK3-208ENST00000472648 TFF2Q03403 129 aa7.44□□□□□ -1.22
SIK3-208ENST00000472648 GCKRQ14397 625 aa7.44□□□□□ -1.22
SIK3-208ENST00000472648 CCL14Q16627 93 aa7.44□□□□□ -1.22
SIK3-208ENST00000472648 MFSD14CQ5VZR4 134 aa7.44□□□□□ -1.22
SIK3-208ENST00000472648 SLC39A5Q6ZMH5 540 aa7.44□□□□□ -1.22
SIK3-208ENST00000472648 LDHAL6AQ6ZMR3 332 aa7.44□□□□□ -1.22
SIK3-208ENST00000472648 MICALL1Q8N3F8 863 aa7.44□□□□□ -1.22
SIK3-208ENST00000472648 FAM84BQ96KN1 310 aaPredicted RBP7.44□□□□□ -1.22
SIK3-208ENST00000472648 APBA2Q99767 749 aa7.44□□□□□ -1.22
SIK3-208ENST00000472648 MRIQ9BWK5 157 aa7.44□□□□□ -1.22
SIK3-208ENST00000472648 CHMP4AQ9BY43 222 aa7.44□□□□□ -1.22
SIK3-208ENST00000472648 ASCC2Q9H1I8 757 aaPredicted RBP7.44□□□□□ -1.22
SIK3-208ENST00000472648 MORF4L1Q9UBU8 362 aa7.44□□□□□ -1.22
SIK3-208ENST00000472648 DDX20Q9UHI6 824 aaKnown RBP7.44□□□□□ -1.22
SIK3-208ENST00000472648 MYBBP1AQ9BQG0 1328 aaKnown RBP7.44□□□□□ -1.22
SIK3-208ENST00000472648 COL4A4P53420 1690 aaPredicted RBP7.44□□□□□ -1.22
SIK3-208ENST00000472648 TRIM43BA6NCK2 446 aa7.43□□□□□ -1.22
SIK3-208ENST00000472648 SMIM22K7EJ46 135 aa7.43□□□□□ -1.22
SIK3-208ENST00000472648 ELL2O00472 640 aaPredicted RBP7.43□□□□□ -1.22
SIK3-208ENST00000472648 CTNND1O60716 968 aaKnown RBP7.43□□□□□ -1.22
SIK3-208ENST00000472648 RAG1P15918 1043 aa7.43□□□□□ -1.22
SIK3-208ENST00000472648 MAPK4P31152 587 aa7.43□□□□□ -1.22
SIK3-208ENST00000472648 IRX3P78415 501 aaPredicted RBP7.43□□□□□ -1.22
SIK3-208ENST00000472648 FPGSQ05932 587 aa7.43□□□□□ -1.22
SIK3-208ENST00000472648 NFIAQ12857 509 aa7.43□□□□□ -1.22
SIK3-208ENST00000472648 SKIV2LQ15477 1246 aaKnown RBP7.43□□□□□ -1.22
SIK3-208ENST00000472648 CCDC57Q2TAC2 916 aa7.43□□□□□ -1.22
SIK3-208ENST00000472648 CAVIN4Q5BKX8 364 aa7.43□□□□□ -1.22
SIK3-208ENST00000472648 GJC2Q5T442 439 aaPredicted RBP7.43□□□□□ -1.22
SIK3-208ENST00000472648 CCDC30Q5VVM6 783 aa7.43□□□□□ -1.22
SIK3-208ENST00000472648 SH3RF1Q7Z6J0 888 aa7.43□□□□□ -1.22
SIK3-208ENST00000472648 ZSCAN29Q8IWY8 852 aaPredicted RBP7.43□□□□□ -1.22
SIK3-208ENST00000472648 ARRDC4Q8NCT1 418 aa7.43□□□□□ -1.22
SIK3-208ENST00000472648 TRIM43Q96BQ3 446 aaPredicted RBP7.43□□□□□ -1.22
SIK3-208ENST00000472648 ZNF594Q96JF6 807 aaPredicted RBP7.43□□□□□ -1.22
SIK3-208ENST00000472648 C11orf16Q9NQ32 467 aa7.43□□□□□ -1.22
SIK3-208ENST00000472648 MBIPQ9NS73 344 aa7.43□□□□□ -1.22
SIK3-208ENST00000472648 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.43□□□□□ -1.22
SIK3-208ENST00000472648 SUGT1Q9Y2Z0 365 aa7.43□□□□□ -1.22
SIK3-208ENST00000472648 ATRNL1Q5VV63 1379 aa7.43□□□□□ -1.22
SIK3-208ENST00000472648 FOCADQ5VW36 1801 aa7.43□□□□□ -1.22
SIK3-208ENST00000472648 PRRC2BQ5JSZ5 2229 aaKnown RBP7.42□□□□□ -1.22
SIK3-208ENST00000472648 MYCNP04198 464 aaPredicted RBP7.42□□□□□ -1.22
SIK3-208ENST00000472648 CLTBP09497 229 aa7.42□□□□□ -1.22
SIK3-208ENST00000472648 ZEB1P37275 1124 aaPredicted RBP7.42□□□□□ -1.22
SIK3-208ENST00000472648 EPHB4P54760 987 aa7.42□□□□□ -1.22
SIK3-208ENST00000472648 HMGCS2P54868 508 aa7.42□□□□□ -1.22
SIK3-208ENST00000472648 CASP7P55210 303 aa7.42□□□□□ -1.22
SIK3-208ENST00000472648 NHLH1Q02575 133 aa7.42□□□□□ -1.22
SIK3-208ENST00000472648 ADGRE1Q14246 886 aa7.42□□□□□ -1.22
SIK3-208ENST00000472648 SNX17Q15036 470 aa7.42□□□□□ -1.22
SIK3-208ENST00000472648 CDC42EP5Q6NZY7 148 aa7.42□□□□□ -1.22
SIK3-208ENST00000472648 CCDC84Q86UT8 332 aaPredicted RBP7.42□□□□□ -1.22
SIK3-208ENST00000472648 GPRC5AQ8NFJ5 357 aa7.42□□□□□ -1.22
SIK3-208ENST00000472648 PBX4Q9BYU1 374 aa7.42□□□□□ -1.22
SIK3-208ENST00000472648 FAM198AQ9UFP1 575 aa7.42□□□□□ -1.22
SIK3-208ENST00000472648 TRIM35Q9UPQ4 493 aa7.42□□□□□ -1.22
SIK3-208ENST00000472648 TACC3Q9Y6A5 838 aa7.42□□□□□ -1.22
SIK3-208ENST00000472648 SIPA1L1O43166 1804 aa7.42□□□□□ -1.22
SIK3-208ENST00000472648 UTYO14607 1347 aa7.42□□□□□ -1.22
SIK3-208ENST00000472648 COL11A1P12107 1806 aaPredicted RBP7.41□□□□□ -1.22
SIK3-208ENST00000472648 PRR33A8MZF0 331 aa7.41□□□□□ -1.22
SIK3-208ENST00000472648 PBX2P40425 430 aa7.41□□□□□ -1.22
SIK3-208ENST00000472648 SPP2Q13103 211 aa7.41□□□□□ -1.22
SIK3-208ENST00000472648 MORN1Q5T089 497 aa7.41□□□□□ -1.22
SIK3-208ENST00000472648 GPR142Q7Z601 462 aa7.41□□□□□ -1.22
SIK3-208ENST00000472648 PLEKHH3Q7Z736 793 aa7.41□□□□□ -1.22
SIK3-208ENST00000472648 CCDC146Q8IYE0 955 aa7.41□□□□□ -1.22
SIK3-208ENST00000472648 USP6NLQ92738 828 aa7.41□□□□□ -1.22
SIK3-208ENST00000472648 UIMC1Q96RL1 719 aa7.41□□□□□ -1.22
SIK3-208ENST00000472648 STK31Q9BXU1 1019 aa7.41□□□□□ -1.22
SIK3-208ENST00000472648 TBC1D2Q9BYX2 928 aa7.41□□□□□ -1.22
SIK3-208ENST00000472648 USP40Q9NVE5 1235 aa7.41□□□□□ -1.22
SIK3-208ENST00000472648 MSRAQ9UJ68 235 aa7.41□□□□□ -1.22
SIK3-208ENST00000472648 DAGLAQ9Y4D2 1042 aa7.41□□□□□ -1.22
SIK3-208ENST00000472648 C5orf42Q9H799 3197 aa7.41□□□□□ -1.22
SIK3-208ENST00000472648 ZNF318Q5VUA4 2279 aa7.4□□□□□ -1.22
SIK3-208ENST00000472648 ERC2O15083 957 aa7.4□□□□□ -1.22
SIK3-208ENST00000472648 GLRX3O76003 335 aaKnown RBP7.4□□□□□ -1.22
SIK3-208ENST00000472648 ITGB8P26012 769 aa7.4□□□□□ -1.22
SIK3-208ENST00000472648 RGS3P49796 1198 aa7.4□□□□□ -1.22
SIK3-208ENST00000472648 ERVK-9P63128 1117 aa7.4□□□□□ -1.22
SIK3-208ENST00000472648 ERVK-24P63145 666 aa7.4□□□□□ -1.22
SIK3-208ENST00000472648 FOXO4P98177 505 aa7.4□□□□□ -1.22
SIK3-208ENST00000472648 ATP2B2Q01814 1243 aa7.4□□□□□ -1.22
SIK3-208ENST00000472648 TLE2Q04725 743 aa7.4□□□□□ -1.22
SIK3-208ENST00000472648 TRIM26Q12899 539 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms