RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 SELPP16109 830 aa4.92□□□□□ -1.62
XRN1-209ENST00000472625 EPB42P16452 691 aa4.92□□□□□ -1.62
XRN1-209ENST00000472625 GPLD1P80108 840 aa4.92□□□□□ -1.62
XRN1-209ENST00000472625 ARHGAP4P98171 946 aa4.92□□□□□ -1.62
XRN1-209ENST00000472625 ZNF211Q13398 564 aaPredicted RBP4.92□□□□□ -1.62
XRN1-209ENST00000472625 PERM1Q5SV97 790 aa4.92□□□□□ -1.62
XRN1-209ENST00000472625 HDGFL2Q7Z4V5 671 aaPredicted RBP4.92□□□□□ -1.62
XRN1-209ENST00000472625 Q8N3U1 123 aa4.92□□□□□ -1.62
XRN1-209ENST00000472625 GPR152Q8TDT2 470 aa4.92□□□□□ -1.62
XRN1-209ENST00000472625 ANO2Q9NQ90 1003 aa4.92□□□□□ -1.62
XRN1-209ENST00000472625 TERF2IPQ9NYB0 399 aa4.92□□□□□ -1.62
XRN1-209ENST00000472625 TLR7Q9NYK1 1049 aaKnown RBP4.92□□□□□ -1.62
XRN1-209ENST00000472625 PIK3C2AO00443 1686 aa4.92□□□□□ -1.62
XRN1-209ENST00000472625 NFAT5O94916 1531 aa4.92□□□□□ -1.62
XRN1-209ENST00000472625 USP31Q70CQ4 1352 aa4.91□□□□□ -1.62
XRN1-209ENST00000472625 EDC4Q6P2E9 1401 aaKnown RBP4.91□□□□□ -1.62
XRN1-209ENST00000472625 SMG6Q86US8 1419 aaKnown RBP4.91□□□□□ -1.62
XRN1-209ENST00000472625 RGS9O75916 674 aaPredicted RBP4.91□□□□□ -1.62
XRN1-209ENST00000472625 CYP2E1P05181 493 aaPredicted RBP4.91□□□□□ -1.62
XRN1-209ENST00000472625 IL2RBP14784 551 aa4.91□□□□□ -1.62
XRN1-209ENST00000472625 POLD1P28340 1107 aa4.91□□□□□ -1.62
XRN1-209ENST00000472625 SOX18P35713 384 aa4.91□□□□□ -1.62
XRN1-209ENST00000472625 SLC15A2Q16348 729 aa4.91□□□□□ -1.62
XRN1-209ENST00000472625 TXNRD1Q16881 649 aa4.91□□□□□ -1.62
XRN1-209ENST00000472625 XKR5Q6UX68 686 aa4.91□□□□□ -1.62
XRN1-209ENST00000472625 OR13H1Q8NG92 308 aa4.91□□□□□ -1.62
XRN1-209ENST00000472625 PUS7Q96PZ0 661 aaKnown RBP4.91□□□□□ -1.62
XRN1-209ENST00000472625 CCDC87Q9NVE4 849 aa4.91□□□□□ -1.62
XRN1-209ENST00000472625 CNTN3Q9P232 1028 aa4.91□□□□□ -1.62
XRN1-209ENST00000472625 RTL1A6NKG5 1358 aa4.91□□□□□ -1.62
XRN1-209ENST00000472625 WNK3Q9BYP7 1800 aa4.9□□□□□ -1.62
XRN1-209ENST00000472625 BTBD11A6QL63 1104 aa4.9□□□□□ -1.63
XRN1-209ENST00000472625 J3QW42 95 aa4.9□□□□□ -1.63
XRN1-209ENST00000472625 ICMTO60725 284 aa4.9□□□□□ -1.63
XRN1-209ENST00000472625 KIF4AO95239 1232 aa4.9□□□□□ -1.63
XRN1-209ENST00000472625 EIF2AK2P19525 551 aaKnown RBP4.9□□□□□ -1.63
XRN1-209ENST00000472625 NRLP54845 237 aa4.9□□□□□ -1.63
XRN1-209ENST00000472625 RAC1P63000 192 aa4.9□□□□□ -1.63
XRN1-209ENST00000472625 FKBP4Q02790 459 aaKnown RBP eCLIP4.9□□□□□ -1.63
XRN1-209ENST00000472625 MBTPS1Q14703 1052 aa4.9□□□□□ -1.63
XRN1-209ENST00000472625 FOXD4L6Q3SYB3 417 aaPredicted RBP4.9□□□□□ -1.63
XRN1-209ENST00000472625 NKAPLQ5M9Q1 402 aa4.9□□□□□ -1.63
XRN1-209ENST00000472625 FOXD4L3Q6VB84 417 aaPredicted RBP4.9□□□□□ -1.63
XRN1-209ENST00000472625 FMR1NBQ8N0W7 255 aaPredicted RBP4.9□□□□□ -1.63
XRN1-209ENST00000472625 MARCH10Q8NA82 808 aaPredicted RBP4.9□□□□□ -1.63
XRN1-209ENST00000472625 EDEM1Q92611 657 aa4.9□□□□□ -1.63
XRN1-209ENST00000472625 NSUN5Q96P11 429 aaKnown RBP4.9□□□□□ -1.63
XRN1-209ENST00000472625 SMG9Q9H0W8 520 aaKnown RBP4.9□□□□□ -1.63
XRN1-209ENST00000472625 EGFL7Q9UHF1 273 aa4.9□□□□□ -1.63
XRN1-209ENST00000472625 AKAP12Q02952 1782 aa4.9□□□□□ -1.63
XRN1-209ENST00000472625 CGNL1Q0VF96 1302 aa4.9□□□□□ -1.63
XRN1-209ENST00000472625 TONSLQ96HA7 1378 aa4.9□□□□□ -1.63
XRN1-209ENST00000472625 NHSQ6T4R5 1651 aa4.89□□□□□ -1.63
XRN1-209ENST00000472625 USP54Q70EL1 1684 aa4.89□□□□□ -1.63
XRN1-209ENST00000472625 FAM208AQ9UK61 1670 aaKnown RBP4.89□□□□□ -1.63
XRN1-209ENST00000472625 NSD3Q9BZ95 1437 aa4.89□□□□□ -1.63
XRN1-209ENST00000472625 CASZ1Q86V15 1759 aa4.89□□□□□ -1.63
XRN1-209ENST00000472625 NFKBIEO00221 500 aa4.89□□□□□ -1.63
XRN1-209ENST00000472625 DYRK3O43781 588 aa4.89□□□□□ -1.63
XRN1-209ENST00000472625 ZBTB7AO95365 584 aa4.89□□□□□ -1.63
XRN1-209ENST00000472625 ELNP15502 786 aa4.89□□□□□ -1.63
XRN1-209ENST00000472625 ADGRE1Q14246 886 aa4.89□□□□□ -1.63
XRN1-209ENST00000472625 NOM1Q5C9Z4 860 aaKnown RBP4.89□□□□□ -1.63
XRN1-209ENST00000472625 ZMYM1Q5SVZ6 1142 aa4.89□□□□□ -1.63
XRN1-209ENST00000472625 ELMSAN1Q6PJG2 1045 aa4.89□□□□□ -1.63
XRN1-209ENST00000472625 GJD3Q8N144 294 aa4.89□□□□□ -1.63
XRN1-209ENST00000472625 TTC9Q92623 222 aa4.89□□□□□ -1.63
XRN1-209ENST00000472625 NACC1Q96RE7 527 aa4.89□□□□□ -1.63
XRN1-209ENST00000472625 CARD11Q9BXL7 1154 aa4.89□□□□□ -1.63
XRN1-209ENST00000472625 NLRP2Q9NX02 1062 aa4.89□□□□□ -1.63
XRN1-209ENST00000472625 FRRS1LQ9P0K9 344 aa4.89□□□□□ -1.63
XRN1-209ENST00000472625 POLIQ9UNA4 740 aa4.89□□□□□ -1.63
XRN1-209ENST00000472625 GNEQ9Y223 722 aaKnown RBP4.89□□□□□ -1.63
XRN1-209ENST00000472625 ACPPP15309 386 aa4.88□□□□□ -1.63
XRN1-209ENST00000472625 MZF1P28698 734 aaPredicted RBP4.88□□□□□ -1.63
XRN1-209ENST00000472625 MSL1Q68DK7 614 aa4.88□□□□□ -1.63
XRN1-209ENST00000472625 C1orf127Q8N9H9 656 aa4.88□□□□□ -1.63
XRN1-209ENST00000472625 TMC1Q8TDI8 760 aa4.88□□□□□ -1.63
XRN1-209ENST00000472625 ANKRD24Q8TF21 1146 aa4.88□□□□□ -1.63
XRN1-209ENST00000472625 COG3Q96JB2 828 aa4.88□□□□□ -1.63
XRN1-209ENST00000472625 SYT17Q9BSW7 474 aa4.88□□□□□ -1.63
XRN1-209ENST00000472625 MON2Q7Z3U7 1717 aa4.88□□□□□ -1.63
XRN1-209ENST00000472625 KIF24Q5T7B8 1368 aa4.88□□□□□ -1.63
XRN1-209ENST00000472625 ANKRD36BQ8N2N9 1353 aa4.88□□□□□ -1.63
XRN1-209ENST00000472625 COL18A1P39060 1754 aa4.88□□□□□ -1.63
XRN1-209ENST00000472625 PAPPAQ13219 1627 aa4.87□□□□□ -1.63
XRN1-209ENST00000472625 MYOM1P52179 1685 aa4.87□□□□□ -1.63
XRN1-209ENST00000472625 LOC102724428A0A0B4J2F2 783 aa4.87□□□□□ -1.63
XRN1-209ENST00000472625 C9orf172C9J069 976 aa4.87□□□□□ -1.63
XRN1-209ENST00000472625 GRIN3BO60391 1043 aa4.87□□□□□ -1.63
XRN1-209ENST00000472625 SIK1P57059 783 aa4.87□□□□□ -1.63
XRN1-209ENST00000472625 ATP11AP98196 1134 aa4.87□□□□□ -1.63
XRN1-209ENST00000472625 NRG1Q02297 640 aaPredicted RBP4.87□□□□□ -1.63
XRN1-209ENST00000472625 DNM1Q05193 864 aaKnown RBP4.87□□□□□ -1.63
XRN1-209ENST00000472625 GDF6Q6KF10 455 aaPredicted RBP4.87□□□□□ -1.63
XRN1-209ENST00000472625 PDE12Q6L8Q7 609 aaKnown RBP4.87□□□□□ -1.63
XRN1-209ENST00000472625 TXNRD3Q86VQ6 643 aa4.87□□□□□ -1.63
XRN1-209ENST00000472625 WFDC8Q8IUA0 241 aa4.87□□□□□ -1.63
XRN1-209ENST00000472625 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.87□□□□□ -1.633e-6■□□□□ 8.8
XRN1-209ENST00000472625 CEP120Q8N960 986 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms