RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 SPDYE5A6NIY4 337 aa18.31■□□□□ 0.52
CALD1-215ENST00000472096 GOLIM4O00461 696 aa18.31■□□□□ 0.52
CALD1-215ENST00000472096 INPP5BP32019 993 aa18.31■□□□□ 0.52
CALD1-215ENST00000472096 TMED8Q6PL24 325 aaPredicted RBP18.31■□□□□ 0.52
CALD1-215ENST00000472096 ZKSCAN4Q969J2 545 aaPredicted RBP18.31■□□□□ 0.52
CALD1-215ENST00000472096 ZNF112Q9UJU3 913 aa18.31■□□□□ 0.52
CALD1-215ENST00000472096 ZNF579Q8NAF0 562 aaKnown RBP18.3■□□□□ 0.52
CALD1-215ENST00000472096 EDC3Q96F86 508 aaKnown RBP18.3■□□□□ 0.52
CALD1-215ENST00000472096 OTUD5Q96G74 571 aa18.3■□□□□ 0.52
CALD1-215ENST00000472096 HAUS7Q99871 368 aa18.3■□□□□ 0.52
CALD1-215ENST00000472096 BOLA2Q9H3K6 86 aa18.3■□□□□ 0.52
CALD1-215ENST00000472096 PAG1Q9NWQ8 432 aa18.3■□□□□ 0.52
CALD1-215ENST00000472096 FLT1P17948 1338 aa18.29■□□□□ 0.52
CALD1-215ENST00000472096 DYNLL1P63167 89 aaKnown RBP18.29■□□□□ 0.52
CALD1-215ENST00000472096 AAMPQ13685 434 aa18.29■□□□□ 0.52
CALD1-215ENST00000472096 NOL9Q5SY16 702 aaKnown RBP18.29■□□□□ 0.52
CALD1-215ENST00000472096 ERO1BQ86YB8 467 aa18.29■□□□□ 0.52
CALD1-215ENST00000472096 IFNL1Q8IU54 200 aa18.29■□□□□ 0.52
CALD1-215ENST00000472096 TNS4Q8IZW8 715 aa18.29■□□□□ 0.52
CALD1-215ENST00000472096 MIGA1Q8NAN2 632 aa18.29■□□□□ 0.52
CALD1-215ENST00000472096 STK24Q9Y6E0 443 aa18.29■□□□□ 0.52
CALD1-215ENST00000472096 IGF2BP3O00425 579 aaKnown RBP eCLIP18.28■□□□□ 0.52
CALD1-215ENST00000472096 SLURP2P0DP57 97 aa18.28■□□□□ 0.52
CALD1-215ENST00000472096 PDE6AP16499 860 aa18.28■□□□□ 0.52
CALD1-215ENST00000472096 INHBEP58166 350 aa18.28■□□□□ 0.52
CALD1-215ENST00000472096 MAP3K10Q02779 954 aa18.28■□□□□ 0.52
CALD1-215ENST00000472096 CERS3Q8IU89 383 aa18.28■□□□□ 0.52
CALD1-215ENST00000472096 TGFBRAP1Q8WUH2 860 aa18.28■□□□□ 0.52
CALD1-215ENST00000472096 ECHDC1Q9NTX5 307 aa18.28■□□□□ 0.52
CALD1-215ENST00000472096 MYH8P13535 1937 aa18.27■□□□□ 0.52
CALD1-215ENST00000472096 BAZ2AQ9UIF9 1905 aaKnown RBP18.27■□□□□ 0.52
CALD1-215ENST00000472096 TESPA1A2RU30 521 aaPredicted RBP18.27■□□□□ 0.52
CALD1-215ENST00000472096 PHF20L1A8MW92 1017 aa18.27■□□□□ 0.52
CALD1-215ENST00000472096 PPIL2Q13356 520 aa18.27■□□□□ 0.52
CALD1-215ENST00000472096 HDAC1Q13547 482 aaPredicted RBP18.27■□□□□ 0.52
CALD1-215ENST00000472096 SLC9C2Q5TAH2 1124 aa18.27■□□□□ 0.52
CALD1-215ENST00000472096 MAPKAPK5Q8IW41 473 aa18.27■□□□□ 0.52
CALD1-215ENST00000472096 GPATCH3Q96I76 525 aa18.27■□□□□ 0.52
CALD1-215ENST00000472096 MS4A4AQ96JQ5 239 aa18.27■□□□□ 0.52
CALD1-215ENST00000472096 SUPT16HQ9Y5B9 1047 aaKnown RBP18.27■□□□□ 0.52
CALD1-215ENST00000472096 TCRBV5S4A2TA0A5A2 114 aa18.26■□□□□ 0.51
CALD1-215ENST00000472096 TBC1D12O60347 775 aa18.26■□□□□ 0.51
CALD1-215ENST00000472096 ALDH1A1P00352 501 aa18.26■□□□□ 0.51
CALD1-215ENST00000472096 GTF2A2P52657 109 aa18.26■□□□□ 0.51
CALD1-215ENST00000472096 EXOC6Q8TAG9 804 aa18.26■□□□□ 0.51
CALD1-215ENST00000472096 RIOK1Q9BRS2 568 aaKnown RBP18.26■□□□□ 0.51
CALD1-215ENST00000472096 CFHR5Q9BXR6 569 aa18.26■□□□□ 0.51
CALD1-215ENST00000472096 ZNF532Q9HCE3 1301 aa18.25■□□□□ 0.51
CALD1-215ENST00000472096 FAM196BA6NMK8 535 aa18.25■□□□□ 0.51
CALD1-215ENST00000472096 HAX1O00165 279 aa18.25■□□□□ 0.51
CALD1-215ENST00000472096 IRF6O14896 467 aa18.25■□□□□ 0.51
CALD1-215ENST00000472096 PPATQ06203 517 aa18.25■□□□□ 0.51
CALD1-215ENST00000472096 PDAP1Q13442 181 aaKnown RBP18.25■□□□□ 0.51
CALD1-215ENST00000472096 TSHZ3Q63HK5 1081 aa18.25■□□□□ 0.51
CALD1-215ENST00000472096 SCYL3Q8IZE3 742 aa18.25■□□□□ 0.51
CALD1-215ENST00000472096 BRI3BPQ8WY22 251 aa18.25■□□□□ 0.51
CALD1-215ENST00000472096 DHX36Q9H2U1 1008 aaKnown RBP18.25■□□□□ 0.51
CALD1-215ENST00000472096 CCL15-CCL14A0A0B4J2E2 113 aa18.24■□□□□ 0.51
CALD1-215ENST00000472096 MAGEB6P1A0A0J9YX57 407 aa18.24■□□□□ 0.51
CALD1-215ENST00000472096 TBC1D8O95759 1140 aa18.24■□□□□ 0.51
CALD1-215ENST00000472096 ADD2P35612 726 aa18.24■□□□□ 0.51
CALD1-215ENST00000472096 CCL15Q16663 113 aa18.24■□□□□ 0.51
CALD1-215ENST00000472096 GCC1Q96CN9 775 aa18.24■□□□□ 0.51
CALD1-215ENST00000472096 PTPN18Q99952 460 aa18.24■□□□□ 0.51
CALD1-215ENST00000472096 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.24■□□□□ 0.51
CALD1-215ENST00000472096 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.24■□□□□ 0.51
CALD1-215ENST00000472096 LOC285556D6RIA3 1793 aa18.24■□□□□ 0.51
CALD1-215ENST00000472096 TTC41PQ6P2S7 1318 aa18.23■□□□□ 0.51
CALD1-215ENST00000472096 SNAPC2Q13487 334 aa18.23■□□□□ 0.51
CALD1-215ENST00000472096 SPRYD3Q8NCJ5 442 aa18.23■□□□□ 0.51
CALD1-215ENST00000472096 OTUD7AQ8TE49 926 aaPredicted RBP18.23■□□□□ 0.51
CALD1-215ENST00000472096 PI4KBQ9UBF8 816 aa18.23■□□□□ 0.51
CALD1-215ENST00000472096 HERC5Q9UII4 1024 aaKnown RBP18.23■□□□□ 0.51
CALD1-215ENST00000472096 CTNND1O60716 968 aaKnown RBP18.22■□□□□ 0.51
CALD1-215ENST00000472096 CETPP11597 493 aa18.22■□□□□ 0.51
CALD1-215ENST00000472096 USP5P45974 858 aa18.22■□□□□ 0.51
CALD1-215ENST00000472096 PSEN1P49768 467 aa18.22■□□□□ 0.51
CALD1-215ENST00000472096 NOM1Q5C9Z4 860 aaKnown RBP18.22■□□□□ 0.51
CALD1-215ENST00000472096 OTUD7BQ6GQQ9 843 aa18.22■□□□□ 0.51
CALD1-215ENST00000472096 R3HDMLQ9H3Y0 253 aa18.22■□□□□ 0.51
CALD1-215ENST00000472096 DNAJC18Q9H819 358 aa18.22■□□□□ 0.51
CALD1-215ENST00000472096 PICK1Q9NRD5 415 aa18.22■□□□□ 0.51
CALD1-215ENST00000472096 SAP30BPQ9UHR5 308 aaKnown RBP18.22■□□□□ 0.51
CALD1-215ENST00000472096 PALD1Q9ULE6 856 aa18.22■□□□□ 0.51
CALD1-215ENST00000472096 KCNH4Q9UQ05 1017 aa18.22■□□□□ 0.51
CALD1-215ENST00000472096 SALL3Q9BXA9 1300 aa18.22■□□□□ 0.51
CALD1-215ENST00000472096 PTPRAP18433 802 aa18.21■□□□□ 0.51
CALD1-215ENST00000472096 SLFNL1Q499Z3 407 aa18.21■□□□□ 0.51
CALD1-215ENST00000472096 LCORLQ8N3X6 602 aa18.21■□□□□ 0.51
CALD1-215ENST00000472096 GPR25O00155 361 aa18.2■□□□□ 0.5
CALD1-215ENST00000472096 CHGBP05060 677 aa18.2■□□□□ 0.5
CALD1-215ENST00000472096 HLA-DOAP06340 250 aa18.2■□□□□ 0.5
CALD1-215ENST00000472096 MX1P20591 662 aa18.2■□□□□ 0.5
CALD1-215ENST00000472096 CRHR2Q13324 411 aa18.2■□□□□ 0.5
CALD1-215ENST00000472096 UBE3CQ15386 1083 aa18.2■□□□□ 0.5
CALD1-215ENST00000472096 SLC4A8Q2Y0W8 1093 aa18.2■□□□□ 0.5
CALD1-215ENST00000472096 IFFO2Q5TF58 517 aa18.2■□□□□ 0.5
CALD1-215ENST00000472096 ANKRD45Q5TZF3 282 aa18.2■□□□□ 0.5
CALD1-215ENST00000472096 METTL16Q86W50 562 aaKnown RBP18.2■□□□□ 0.5
CALD1-215ENST00000472096 FAM43AQ8N2R8 423 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms