RNA–Protein interactions for RNA: ENST00000471812.5

GGPS1-204, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2

Gene GGPS1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-204ENST00000471812 SH3RF3Q8TEJ3 882 aaPredicted RBP11.58□□□□□ -0.56
GGPS1-204ENST00000471812 FAM151AQ8WW52 585 aa11.58□□□□□ -0.56
GGPS1-204ENST00000471812 OPTNQ96CV9 577 aa11.58□□□□□ -0.56
GGPS1-204ENST00000471812 FAM163AQ96GL9 167 aaPredicted RBP11.58□□□□□ -0.56
GGPS1-204ENST00000471812 MYH7P12883 1935 aa11.58□□□□□ -0.56
GGPS1-204ENST00000471812 UQCRFS1P1P0C7P4 283 aa11.57□□□□□ -0.56
GGPS1-204ENST00000471812 MS4A1P11836 297 aa11.57□□□□□ -0.56
GGPS1-204ENST00000471812 IREB2P48200 963 aaKnown RBP11.57□□□□□ -0.56
GGPS1-204ENST00000471812 TM4SF4P48230 202 aa11.57□□□□□ -0.56
GGPS1-204ENST00000471812 TNNI2P48788 182 aa11.57□□□□□ -0.56
GGPS1-204ENST00000471812 SLC4A8Q2Y0W8 1093 aa11.57□□□□□ -0.56
GGPS1-204ENST00000471812 TSHZ3Q63HK5 1081 aa11.57□□□□□ -0.56
GGPS1-204ENST00000471812 RPAP2Q8IXW5 612 aaPredicted RBP11.57□□□□□ -0.56
GGPS1-204ENST00000471812 WRNIP1Q96S55 665 aa11.57□□□□□ -0.56
GGPS1-204ENST00000471812 BEGAINQ9BUH8 593 aa11.57□□□□□ -0.56
GGPS1-204ENST00000471812 TMOD2Q9NZR1 351 aa11.57□□□□□ -0.56
GGPS1-204ENST00000471812 COLQQ9Y215 455 aaPredicted RBP11.57□□□□□ -0.56
GGPS1-204ENST00000471812 MAP3K9P80192 1104 aa11.56□□□□□ -0.56
GGPS1-204ENST00000471812 DDX60LQ5H9U9 1706 aaKnown RBP11.56□□□□□ -0.56
GGPS1-204ENST00000471812 CCDC158Q5M9N0 1113 aa11.56□□□□□ -0.56
GGPS1-204ENST00000471812 ANKRD13AQ8IZ07 590 aa11.56□□□□□ -0.56
GGPS1-204ENST00000471812 ZGPATQ8N5A5 531 aaKnown RBP11.56□□□□□ -0.56
GGPS1-204ENST00000471812 OTUD7AQ8TE49 926 aaPredicted RBP11.56□□□□□ -0.56
GGPS1-204ENST00000471812 BRI3BPQ8WY22 251 aa11.56□□□□□ -0.56
GGPS1-204ENST00000471812 IDI2Q9BXS1 227 aa11.56□□□□□ -0.56
GGPS1-204ENST00000471812 AATFQ9NY61 560 aaKnown RBP eCLIP11.56□□□□□ -0.56
GGPS1-204ENST00000471812 LRP2BPQ9P2M1 347 aa11.56□□□□□ -0.56
GGPS1-204ENST00000471812 BAZ2AQ9UIF9 1905 aaKnown RBP11.55□□□□□ -0.56
GGPS1-204ENST00000471812 PHF20L1A8MW92 1017 aa11.55□□□□□ -0.56
GGPS1-204ENST00000471812 JAG1P78504 1218 aa11.55□□□□□ -0.56
GGPS1-204ENST00000471812 SPTY2D1Q68D10 685 aaPredicted RBP11.55□□□□□ -0.56
GGPS1-204ENST00000471812 NAA16Q6N069 864 aaPredicted RBP11.55□□□□□ -0.56
GGPS1-204ENST00000471812 MIGA1Q8NAN2 632 aa11.55□□□□□ -0.56
GGPS1-204ENST00000471812 ZNF512BQ96KM6 892 aaPredicted RBP11.55□□□□□ -0.56
GGPS1-204ENST00000471812 MCOLN1Q9GZU1 580 aa11.55□□□□□ -0.56
GGPS1-204ENST00000471812 ZNF112Q9UJU3 913 aa11.55□□□□□ -0.56
GGPS1-204ENST00000471812 NAV1Q8NEY1 1877 aa11.55□□□□□ -0.56
GGPS1-204ENST00000471812 HTTP42858 3142 aa11.54□□□□□ -0.56
GGPS1-204ENST00000471812 SPDYE5A6NIY4 337 aa11.54□□□□□ -0.56
GGPS1-204ENST00000471812 SMIM22K7EJ46 135 aa11.54□□□□□ -0.56
GGPS1-204ENST00000471812 IRF6O14896 467 aa11.54□□□□□ -0.56
GGPS1-204ENST00000471812 IDH1O75874 414 aaKnown RBP11.54□□□□□ -0.56
GGPS1-204ENST00000471812 MAPKAPK5Q8IW41 473 aa11.54□□□□□ -0.56
GGPS1-204ENST00000471812 FAM43AQ8N2R8 423 aa11.54□□□□□ -0.56
GGPS1-204ENST00000471812 MAGEB6Q8N7X4 407 aa11.54□□□□□ -0.56
GGPS1-204ENST00000471812 ZNF296Q8WUU4 475 aaPredicted RBP11.54□□□□□ -0.56
GGPS1-204ENST00000471812 KIF1BPQ96EK5 621 aa11.54□□□□□ -0.56
GGPS1-204ENST00000471812 SAGE1Q9NXZ1 904 aa11.54□□□□□ -0.56
GGPS1-204ENST00000471812 CA12O43570 354 aa11.53□□□□□ -0.56
GGPS1-204ENST00000471812 ENTPD3O75355 529 aa11.53□□□□□ -0.56
GGPS1-204ENST00000471812 ZBTB48P10074 688 aaPredicted RBP11.53□□□□□ -0.56
GGPS1-204ENST00000471812 CYP7A1P22680 504 aa11.53□□□□□ -0.56
GGPS1-204ENST00000471812 DGKZQ13574 1117 aa11.53□□□□□ -0.56
GGPS1-204ENST00000471812 MOGSQ13724 837 aa11.53□□□□□ -0.56
GGPS1-204ENST00000471812 ERC1Q8IUD2 1116 aa11.53□□□□□ -0.56
GGPS1-204ENST00000471812 TEX11Q8IYF3 940 aa11.53□□□□□ -0.56
GGPS1-204ENST00000471812 TGFBRAP1Q8WUH2 860 aa11.53□□□□□ -0.56
GGPS1-204ENST00000471812 ABHD8Q96I13 439 aa11.53□□□□□ -0.56
GGPS1-204ENST00000471812 DNAJC2Q99543 621 aaKnown RBP11.53□□□□□ -0.56
GGPS1-204ENST00000471812 ZNF341Q9BYN7 854 aa11.53□□□□□ -0.56
GGPS1-204ENST00000471812 CRISPLD2Q9H0B8 497 aa11.53□□□□□ -0.56
GGPS1-204ENST00000471812 OSBPL5Q9H0X9 879 aaPredicted RBP11.53□□□□□ -0.56
GGPS1-204ENST00000471812 BOLA2Q9H3K6 86 aa11.53□□□□□ -0.56
GGPS1-204ENST00000471812 DNAJC18Q9H819 358 aa11.53□□□□□ -0.56
GGPS1-204ENST00000471812 SAP30BPQ9UHR5 308 aaKnown RBP11.53□□□□□ -0.56
GGPS1-204ENST00000471812 CCL15-CCL14A0A0B4J2E2 113 aa11.52□□□□□ -0.57
GGPS1-204ENST00000471812 TESPA1A2RU30 521 aaPredicted RBP11.52□□□□□ -0.57
GGPS1-204ENST00000471812 MANSC4A6NHS7 340 aaPredicted RBP11.52□□□□□ -0.57
GGPS1-204ENST00000471812 GPR25O00155 361 aa11.52□□□□□ -0.57
GGPS1-204ENST00000471812 GOLIM4O00461 696 aa11.52□□□□□ -0.57
GGPS1-204ENST00000471812 HMMRO75330 724 aa11.52□□□□□ -0.57
GGPS1-204ENST00000471812 CRHR2Q13324 411 aa11.52□□□□□ -0.57
GGPS1-204ENST00000471812 CCL15Q16663 113 aa11.52□□□□□ -0.57
GGPS1-204ENST00000471812 ZSCAN29Q8IWY8 852 aaPredicted RBP11.52□□□□□ -0.57
GGPS1-204ENST00000471812 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.52□□□□□ -0.57
GGPS1-204ENST00000471812 FLT1P17948 1338 aa11.52□□□□□ -0.57
GGPS1-204ENST00000471812 TCRBV5S4A2TA0A5A2 114 aa11.51□□□□□ -0.57
GGPS1-204ENST00000471812 BTBD19C9JJ37 291 aa11.51□□□□□ -0.57
GGPS1-204ENST00000471812 RAB11FIP3O75154 756 aa11.51□□□□□ -0.57
GGPS1-204ENST00000471812 IFIT2P09913 472 aaKnown RBP11.51□□□□□ -0.57
GGPS1-204ENST00000471812 PDE6AP16499 860 aa11.51□□□□□ -0.57
GGPS1-204ENST00000471812 PPP4CP60510 307 aa11.51□□□□□ -0.57
GGPS1-204ENST00000471812 MAP3K10Q02779 954 aa11.51□□□□□ -0.57
GGPS1-204ENST00000471812 SREBF2Q12772 1141 aa11.51□□□□□ -0.57
GGPS1-204ENST00000471812 MFSD10Q14728 455 aa11.51□□□□□ -0.57
GGPS1-204ENST00000471812 E2F4Q16254 413 aa11.51□□□□□ -0.57
GGPS1-204ENST00000471812 IER5LQ5T953 404 aa11.51□□□□□ -0.57
GGPS1-204ENST00000471812 DCAF15Q66K64 600 aa11.51□□□□□ -0.57
GGPS1-204ENST00000471812 CLASRPQ8N2M8 674 aaKnown RBP11.51□□□□□ -0.57
GGPS1-204ENST00000471812 DCTPP1Q9H773 170 aa11.51□□□□□ -0.57
GGPS1-204ENST00000471812 PALD1Q9ULE6 856 aa11.51□□□□□ -0.57
GGPS1-204ENST00000471812 CSADQ9Y600 493 aa11.51□□□□□ -0.57
GGPS1-204ENST00000471812 DOCK3Q8IZD9 2030 aa11.5□□□□□ -0.57
GGPS1-204ENST00000471812 MAP4K4O95819 1239 aaPredicted RBP11.5□□□□□ -0.57
GGPS1-204ENST00000471812 LDHCP07864 332 aa11.5□□□□□ -0.57
GGPS1-204ENST00000471812 IRX6P78412 446 aaPredicted RBP11.5□□□□□ -0.57
GGPS1-204ENST00000471812 GSTO1P78417 241 aa11.5□□□□□ -0.57
GGPS1-204ENST00000471812 PPIL2Q13356 520 aa11.5□□□□□ -0.57
GGPS1-204ENST00000471812 HSP90AB4PQ58FF6 505 aa11.5□□□□□ -0.57
GGPS1-204ENST00000471812 NOL9Q5SY16 702 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms